Tele073810.1
Basic Information
- Insect
- Theocolax elegans
- Gene Symbol
- Hivep3
- Assembly
- GCA_026168455.1
- Location
- CM047430.1:69419209-69425342[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 4e-05 0.015 17.7 0.6 1 23 100 122 100 122 0.98 2 9 0.012 4.5 9.9 2.1 1 21 128 148 128 152 0.86 3 9 0.00023 0.084 15.3 0.2 2 21 301 320 300 321 0.95 4 9 8.8e-07 0.00033 22.9 1.6 1 23 739 761 739 761 0.99 5 9 9.8e-06 0.0037 19.6 4.3 1 23 767 791 767 791 0.92 6 9 1.2e-06 0.00045 22.4 0.1 2 23 1182 1203 1181 1203 0.97 7 9 1.1e-05 0.004 19.5 3.0 1 23 1209 1233 1209 1233 0.92 8 9 0.0059 2.2 10.9 3.9 1 23 1254 1278 1254 1278 0.93 9 9 0.013 4.9 9.8 0.9 1 19 1404 1422 1404 1427 0.94
Sequence Information
- Coding Sequence
- ATGAGCGAGCCGCAGCTCGGAAGCAACCAGCACAACGGAAGCGGCACCAGTAGCGGGGCAAGCAAGAGCTTGAACAATAACAACATAACCAGTAATTACAACAACAATAACAACAACAACAACAACAACGATGGCGAACCCAAGTACCTGCACAAAAAGTTCAAGAAGATGGCGGGGACGACGAGCAGTGGCGGTAGCGGAGCGTCGACCCCGATTAACGAAGCTACTCCAGTGGTTAGCAAGGAGCCAACGACGATCATCGCCCCGGTAGGGGATGTCGAGCCACGCAAGTCCGGGTACGTTTGCCCGTACTGCAAGCTCTCATGTGCCAAGCCCAGCGTACTCCAGAAGCACATCAGGGCCCACACGAATGAGCGGCCTTACCCATGCGTGCCTTGTGGATTCGCCTTCAAGACCAAATCCAACCTCTACAAGCACTGCAGGTCTAGGGCGCATGCACTTAAGATGGAGGGCACCGATGCCCCCAAGCAGGTGGTGCAAGCATCGTCGCACCTATCGGAAGATTCGGACGTAAGCCTGTCGGACAGCGCGAGCAACGGCACGGGAACGTCTCCGGCAGCTCCAGCTCCAGGATCCCAAGCTTCGAGTCCAAGTCCGAGTCCCAGTCCGAGTCCGAGCCCGAGTCCGTGTACCCCTGCGACGAAAATCTACAAACCGAAATTCCACACGGCACTTCAGCAATGCGTCACCAGTACGACGAGCACCGTAAGCACGACTGTGACCACCGCGGAGTCACCGAGCCGTCACCAATTGCAAGAGCATATCGAGCGCATAATCACCGATAACCAAGCGATCGTTGACGCTCTGGATCCTCGGCTTCAGAAGCTTTTGCAACGCACGCCTCTCAAACGATCTCACTCTCAGGAGGAGGAGAATTTAACCTGTCAGAACTGCGGTCTGACGTACACCAGCCCGGATAATTTCGAGGCTCATCGACGTTTTTATTGCACGGCGAAACAGGAGCCGGAACCCGAGCCAGAGCAGGATGATTTTTATTCCGGCTCGCAACCGTTACCTTCCCCTGGTCCGTTGTTGGGTAACACACGACTGGTCGATGCTCACTGCCCGAAAAAACCGAGACTGGAGCCTATCGACGAACTTCCTAAACAGCATCAGCATCAGCACCATAACCAGCACCAGCAGCAGCAGCAGCGACCCAACGCGTTACAAATGTTCGGTGGTGAAGTACGCATTCTCTCGGGTAGCGGTGAGAGTAAAACGATGCGGATCGAGCCTAGGACGGGTGGTGAGACACCCTCGATGGATCCTAGTCCCGAGCATCCGGTGGATGCTTTGGGTACCGAGGCTGCGATATTCGTGCGATCGGGCCTACACTCGGGTGGTACGATGCTGCACAAACCGCCTAGTCCAGAGCAACCTTCCGTCTCCGCGAGCATAAGTCTCGCCGGGATAGCACCTAACATATCTACGCCGAGTTTGGCGCCGAATCTCGCGCCCAATTTGGCTCCTAGCTTAGGATATCTTAAGCCAGGTAGTATACTGCACGGTGGCCGATTGATACCCTACGTACCGGGAATGCCAGGACCTCAGAGTTTGTCGGTCACGGCGCAGCAACCCCTCGATTTGACTCAGGTTACGCCTACCACTCGAGTTATCGAGACCGCGATCATCGAAGATAATTCTGGGAGACCCAGCCCAGCAAGTAAATTCCTACGACCGTCCTCGCTACCGCTCAAGCCTGGCACGTTTACGCCTAAACGCCATCACGGAATAACACCTACTGCCAATACTTTGGCTCTCATCAGTCCCGAAACTCCGAGACCTAAAAAGTCGTATGGTCAGTTGTATCTGAACGGACACGCGTACACGTATCTGGGACTCAAGTGCTCGACCCGCGTGTTTTACTGCACCCTTAACCGAACCCAACCGATGTACGTTAGGCAACAACACGGACTTTCCATGTATTCCAATTGGAAGATTTGCAAGGAAACGCCACCCGATCTCGAGCTTGCTCACTACGATTCCAGACACCGACCGGCTGGTTACACGCTTGCGACCAGTCGTCACGAGGATATATTGACGCACTCGTCTCAAAGACCAAGTACGCCTAGTAGTCCGGATAGCGGGTTGGAGAGCGACGGCCAGGAGAAGAGCAAACGGGTTAAAATTTTCGACGGAGGTTTCGAGAGCAACGAAGATTATACCTACGTGCGGGGCAGAGGACGTGGGCGCTACGTTTGCGAGGAATGTGGTATACGATGTAAAAAGCCCTCTATGTTGAAGAAGCACATTAGGACGCATACGGATGTGCGACCATACACGTGCAAACATTGTGCGTTTAGCTTCAAGACCAAGGGTAACCTAACGAAGCACATGAAGTCTAAGGCTCATTACAAAAAGTGCGTAGAACTAAAAGTACTTCCAGTACCGACTACGGTATGCGACGAAAATATCGATAAGGAAGCGTTGAGTCGTTTAGTACTCGCCGGTGCCGGTGGTGAGGATACCTCCTCCGAAGAGGAAGACAGCGAGCCCGAGAGCGACGAGTCAGGTAGCGAAGAACATGAGGCTGCTCAGAGCTTACTTCGACTCGCGAGGCCTAGTACTCAACGATTGCCGGGTTTGTTGCCCGCAGCCAGGCCTGCTACGTACCCTTACAGCTCATCTAGTTGTCTCGTTCCGCCGACTCCACCTGCGGCGAGTTTACCGCGACCAGCTTCCCCATCGACTTCAACTGCGACGACTGGTTTCGACGAGTCTTCCCGTCTGAGTGTCATTCGTTCGTGCAAAAGGGATGAGCCTGGCAGCACGCCCATTGACCTCACTAATAGACAAAACCAACAACAACAGCAGCAGCAGCCGCCGCTACAGCAGCAACAACAGCCGGAACAACCTAGGCGAGCTAGTCCCGGTGACATCCTAACGGAAGTGTCGGGTCCAGCGCTCTTACAAACGATAGTCCAGTCAATGGAACGTCTGCCCATACAAGGTGGACGCGAATGGCCAGGTGAGCCGGCCGAAGGCCAGATGTTACAGGCTTATCTCACCGAGCGCCACATGATGGACAGCAAAATGAAGCAGCAATATCGCGTAGCGAGCAGAGATACGACCGTAACACCCGTCGTACCCGAACCGGTTACTGGGCTTGCGAGTATTGCCGAAAAAACAAGCCTGGTCGCAGAACTGCCGGCGCAAAGCGCACTCGAGAGAAACGCGAGCTTTAGGCCAAGCTTCCACGAGCTTGAGGAGCCTGCCAGACTGCCGGAGGAGCCGACCAAGCCGGAGCCTCAACAAGCACCACCAATCCCACAGCCGCAACCACACCCTCAGCCATCTGTCCTCGAAATCAAACCTAACGTCGAGATCATGAATAAAAATGTCAATTTGGCGATTAATGAAGCTGCGAAGCAGCAACAGCAGCAGATGATGCAGGCCAGGAAGGTCGTTGTTGGTGGAGCTGGATTTCGATCGACGTCGCCTCATAAATCTACTCCAGAATTCTTCCAACCTGCTAATGCTAATCCAACGAATTACGTGAGTATGTCGGAGGACAGTCGCAGTGTGTGTGGTATCTGCAACAAAGTGTTCAGTAAACCAAGCCAATTGAGGCTACACATCAACATTCACTATTTTGAACGACCATTCAGGTGTGAAAGTTGTGGAACTTCCTTCCGCACGAAGGGACATTTGACTAAACATGAAAGGTCGACGCTTCATCACAATAAGGTGAGCATGACGTCGACTTTTGGAGCCGCCACCGCGAGTAATCCACGACCATTCAAATGTACAGACTGTAAGTCAGCCTTCCGCATACACGGGCATTTAGCCAAACATCTCCGCAGTAAAATGCACATAATGAAACTGGAATGTCTACGGAAACTGCCGTTTGGTACCTATGCCGAAATGGAAAGATCCGGCGTGAATCTGAGTGACATCGATACGACCGACTGTGATACTAGTCTTACTAGTCTTCAAATAATGGCGCAAAAGCTTTGTGAGAAGGATCCCAGTAAACTAGGACAATGGGACGCGGGTATGATGCGAAACAACACGACAAGTGGTGGCGAAAGTTCTTCCGACGAAGGTGAAGTAAATGGACAAAATTCAACTCATCCGCGTACGATGGGCCAAGGCAACGAATCCGATGCATCTCCTGGTTATTACGTTAAAGTGTGTGGAAAAGCGAACGACATGAATCTAATGGACGATATGCGAAACGGACCCGCTTACAAGTGCCAAATGTGTCCATTATCCCTACGAAGTTTGAGCGAGCTGCAGGTACACTGCTTCGTCGAGCATAATGTTGAGTCGAGTGGTACCTTGAAAATCCAAGCTTCTACCAGTTACGAGGAAAAAATCCAAGACAAAGAGAATACTCATCGGTTCAAAGGGATCGATAAATGCGCAATTAGAGAATCCGAAGCTGGACAAAGAGTGGACGCTACTTAG
- Protein Sequence
- MSEPQLGSNQHNGSGTSSGASKSLNNNNITSNYNNNNNNNNNNDGEPKYLHKKFKKMAGTTSSGGSGASTPINEATPVVSKEPTTIIAPVGDVEPRKSGYVCPYCKLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRAHALKMEGTDAPKQVVQASSHLSEDSDVSLSDSASNGTGTSPAAPAPGSQASSPSPSPSPSPSPSPCTPATKIYKPKFHTALQQCVTSTTSTVSTTVTTAESPSRHQLQEHIERIITDNQAIVDALDPRLQKLLQRTPLKRSHSQEEENLTCQNCGLTYTSPDNFEAHRRFYCTAKQEPEPEPEQDDFYSGSQPLPSPGPLLGNTRLVDAHCPKKPRLEPIDELPKQHQHQHHNQHQQQQQRPNALQMFGGEVRILSGSGESKTMRIEPRTGGETPSMDPSPEHPVDALGTEAAIFVRSGLHSGGTMLHKPPSPEQPSVSASISLAGIAPNISTPSLAPNLAPNLAPSLGYLKPGSILHGGRLIPYVPGMPGPQSLSVTAQQPLDLTQVTPTTRVIETAIIEDNSGRPSPASKFLRPSSLPLKPGTFTPKRHHGITPTANTLALISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRTQPMYVRQQHGLSMYSNWKICKETPPDLELAHYDSRHRPAGYTLATSRHEDILTHSSQRPSTPSSPDSGLESDGQEKSKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCAFSFKTKGNLTKHMKSKAHYKKCVELKVLPVPTTVCDENIDKEALSRLVLAGAGGEDTSSEEEDSEPESDESGSEEHEAAQSLLRLARPSTQRLPGLLPAARPATYPYSSSSCLVPPTPPAASLPRPASPSTSTATTGFDESSRLSVIRSCKRDEPGSTPIDLTNRQNQQQQQQQPPLQQQQQPEQPRRASPGDILTEVSGPALLQTIVQSMERLPIQGGREWPGEPAEGQMLQAYLTERHMMDSKMKQQYRVASRDTTVTPVVPEPVTGLASIAEKTSLVAELPAQSALERNASFRPSFHELEEPARLPEEPTKPEPQQAPPIPQPQPHPQPSVLEIKPNVEIMNKNVNLAINEAAKQQQQQMMQARKVVVGGAGFRSTSPHKSTPEFFQPANANPTNYVSMSEDSRSVCGICNKVFSKPSQLRLHINIHYFERPFRCESCGTSFRTKGHLTKHERSTLHHNKVSMTSTFGAATASNPRPFKCTDCKSAFRIHGHLAKHLRSKMHIMKLECLRKLPFGTYAEMERSGVNLSDIDTTDCDTSLTSLQIMAQKLCEKDPSKLGQWDAGMMRNNTTSGGESSSDEGEVNGQNSTHPRTMGQGNESDASPGYYVKVCGKANDMNLMDDMRNGPAYKCQMCPLSLRSLSELQVHCFVEHNVESSGTLKIQASTSYEEKIQDKENTHRFKGIDKCAIRESEAGQRVDAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -