Tele031693.1
Basic Information
- Insect
- Theocolax elegans
- Gene Symbol
- -
- Assembly
- GCA_026168455.1
- Location
- CM047426.1:26390402-26396691[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.092 34 7.1 4.7 1 23 335 357 335 357 0.98 2 19 0.00042 0.16 14.5 0.4 1 23 406 428 406 428 0.98 3 19 0.013 4.7 9.8 1.0 1 20 483 502 483 504 0.93 4 19 0.1 38 7.0 1.1 2 23 545 566 544 566 0.96 5 19 0.0047 1.8 11.1 0.3 1 23 606 628 606 628 0.97 6 19 0.0003 0.11 14.9 0.2 1 23 634 656 634 656 0.97 7 19 0.0022 0.83 12.2 2.4 6 23 703 721 699 721 0.90 8 19 0.049 18 7.9 1.1 2 23 728 750 727 750 0.89 9 19 9.1e-05 0.034 16.6 1.2 2 19 776 793 775 798 0.89 10 19 1.9e-05 0.007 18.7 0.5 1 23 825 847 825 847 0.93 11 19 0.1 37 7.0 0.0 2 20 909 927 908 927 0.95 12 19 0.00066 0.25 13.8 0.1 2 23 946 967 945 967 0.97 13 19 0.00013 0.049 16.0 1.9 1 23 989 1011 989 1011 0.97 14 19 0.031 12 8.6 2.8 3 21 1032 1050 1031 1054 0.88 15 19 1.9 6.9e+02 3.0 0.1 2 23 1113 1135 1112 1135 0.92 16 19 0.012 4.5 9.9 2.4 3 23 1168 1189 1166 1189 0.88 17 19 0.0048 1.8 11.1 0.1 1 23 1196 1220 1196 1220 0.94 18 19 0.0046 1.7 11.2 4.4 1 23 1225 1248 1225 1248 0.97 19 19 0.0039 1.4 11.4 0.5 2 23 1279 1301 1278 1301 0.95
Sequence Information
- Coding Sequence
- ATGGACGATATGGACGTTGTGGAAATTAATAGCTACGAGGACGCTTGCAGGCTATGCCTCGACACCGAGCAAACGAGGTCGTCGATTTTCGGCGTGCCAGATGAATCAATTCCTTTCACCGAGAAAATACAATTTTGTTTGTCCATTAAGGTCACATCAAATGACAAATTATCAACTTTAGTTTGTGAAACATGCATCAAAAATATAAACAATTGGCATTCGTACAAAAATGTTTGTCTTCGATCGCAAGAGAAATTGCAGCAGTGGCTATCAGCAAAATTAAATACAAGTATTCAACCTACAGCAACTATTAAGGAAGAGCCTGTAGATGTAGAATTTAAAGAATTAAATCAACAAACAGAAATAAATGATAATGATATAAATGAGATTGCATCAACAGAGAATGGTACAGATGTTATAATAGAAAATAGTATTGTTCCTTCACCAATAAAAGAAATGATGGTACCTGAAGAATCCTTAAAAACGATTGAAAAAGCAGACAAAGGTTTTCCAACAATATTTGACATTAAAACTGAACCTCTTGATACTGAAGACGAAGATGACTGTAACATAGATGTTGAATCTATAAATAGTGGAGAACTGTTGATAAATCCAATGGCTATAGCAGCCGTTAATACTGTTGGTAATAAAGATAGAATAATGGAAGCAGATTCTACCCAGAAGTTTAGTACAAAAAGATTTATGTCAAGAAAGAAAGGACGAAGAGGACCTCACACTCACTATAGAGGAATTCGTTTGTTTAAAAAGAAATGTATTCATTGCAAAATTTATTTGCATTCCAAATATTCATATACGCAGCATATGTCTAGATATCATGGAAATAAACAAAAATCAAAATTAAGTGAACATGTAGATACTTCAGAACAGCTTGTAGATACGCAAAATGATGAAATAAGTCCTGAAGAAGCAGAATACGAAAAAATGATAAAGACTGATCCTTTGACATCTGTACAGAAGAATCTTATAAGTCAACTGAAAACGTTTTCTTGTTATACATGCAACGAAAACTTCTTTGATCGAAGACATACATTAAATCATATTAGACAGCATATGCCTGACTTACAACCATATACTTGCATCGCTTGCCTTACAGAGTTCTCTGATAGGTCAATGTATAAATTACATTGTGGTGCATCATTTGAATGTGCCATGAAAATAGCTTTAGTAGTTCCTAAAATCGGTAATGAAAAATATTTTACATGCAATATGTGTTTACGACCGTTTGATAATCGCAAAGAACTTTTGACTCATTTAGCAATGCACGCTGATAAACAGTATAAGCAATTATCACAGCCAATGAGATCACCACCAAAACTGAAACCAATAGCTCAAATTAGTTCACCTTCTAGAATTGATTTATCACCACATAAAAAATCTGCAGTAAATCTTTCAGGACCATATGTAAATGGTGATCCAGCACATAATCATATGTGCGATTTGTGTGGAATGATTTACAAACATAAAATTAATATGTTTAAACATCGTGAACTCTGTTCCACTCTTCCAGAAAGTATTCGAACTTCTTATAGGTGCATTCACTGTAGTGTAACATATCTTGTATATAAGAAGTTTTATACTCATATTTTTAAAGACCATAAAAAACGCGAAATTACATGCTTCACGTGTTATGCAAGGTTCGAATCTGCTGACGACTATCTCACGCATCATGAGACGCATCGCATAACTACAAATAATGAAAATACAAATGAAACAATTAATATTCAACAACCAGAAAATGAATTTTTGTCAGATTCTATAGATTCAAGTAATCCTAAAGATGTTAATGAGAAACCATACAACTGCGCACTTTGTCGAGAAAGCTTTGCAACGAAACTTGAACTTTCTGAGCATCGAAACTTACATCTAAAAGTAAAAATTTACTCCTGTGTTATCTGTCGTAGTATGTTCAGTAGTTCTGGAGCTCTGGAAACACATATGAAGGACCACGGGATTGAAGACAGTGAACAAAATGCTAATAATTCTTGTCTGGAGTATGGTCGGGGTAGGCGTTCTCAAAATTCACACAATGAATCTTCGTTATCTGCGACGTCAGATCCTGGTGGACAATTTAATCATTGTTACCCGTGTAACAAAAATTTCTCTAATCTTGCTAATTTAAAAAGACATGAACGGAATTTACATTATCAACAAAAACGTTGGAGCTGTACTATTTGCAAACGACGTTTTAAAAGTGCCGAGGATCACGAAGAGCATTATAATTTGGAACATGGACCACAAGCAAAATTTGCTGTAGATCCATTGACTCCTAGTTTGGTATCTCCGTTAACTGGTAAGCCAATAATGCAGTGTCCAAAGTGTCCAAAAACTTTCACCTATCAAGGCAATTTAATAATGCACTGTCAAAATGTTCATAAGGAGAATCATTTCGAACGAGCACGGGCTACAGCTACTCGTCAACCTTCTGTAACTCCTCGAATCGCACCTCACAGTTATGCTTGCAACATCTGTGGTAAAACTTTTAAACAAGAATTATCGCTCAAGACACATCGAGGTTGGCATATTCGATCCAATTACAAACTCAAGTCAGAAAAAAATCTAAATGTAAATAAAAGTCTCGATGAAACAGTAATGAGTGGGCCAGGATACACGATGACAATGACAAGTTCGCCAAAACCGGCGAAAGCACGTAAGTCTTTTCCCAATAATCCACCGCAAAAACAACTGAACGCCATTTCGAGTCTTCAATGTCAAGTCTGTGACGATCGCTTTCCGGATGTAGCCGAACTTCGCAAACATCTGTGGGATGTTCACTGCGCCCGCAATAAACCTGAAAAGATTTTTACATCCGACTTACAATGCGAACTCTGCACAAATAAATTTCCTGATGAGGACGCACTCGAAAATCACATGAAATGGCATTCTCAAAACCCTATTCTCAGTAATACAAACAGTGTCTCAGCTCCCCGGATAAGAAAAAAGATGTTTAATTGTGATATCTGCGGAAAAGATTACAGCAACCGCAAACTTTTCTTGCGTCATAAAAAGTTACACAAAGTCTTACCCGTAGCCACCATGATGAATTTACAATCATTGCAGACGAAAAGACCGTACTGTCAAGCATGTCAAAAGAGCTTCTGCACGGACGCCTCTTTAAAGCGACATAAAACTTCACCCAGCCATCAGGCACATGCGCGTGCTTACATTCAACAACCTGGGAAGAAGATTACCACCACAGCAATAGTGCACCATCCTCCAACCGAATCTGTCAAACTTACATCTATAAAGAAAGAACCTGGTGTGGATTATCCGCCAATTAATAGTCAATCAACATCAGGGGTTAAGAAAAAACCAGTTACTTGTCTTGTTTGCCAGATGATTTTCCCAAGTATGAGTATTTTGTATCGACACAAACAACTCGTTCACAATTTCTCTCGAGCAAAAGTGCCTGCTAAAATGAAGATTAGTAGTAAACAAACAAACGAGTGTGTACCACTTGTTAGTAACGAAGGTATGATCTGTTGTAATGTATGCGGTAGACAATTTCCTGGTATATCGAATTTAAAGCAACATTTCGCGCATAAACATAGAAATAAAGGTATAGATTTTCCATGCACTTTACCAGGATGTAAGATGGTGTTCCCCACTACGACTTTGTTGAAAAACCATTTATCGGCACACGCAAGTATAGTATACAATTGTCATCTGTGTGATAGACATGTCTTTTCTAGAGCTTCAATGAATAAGCACATGATGACTATGCACAAGGCTATTTATCAGTCGGGTGCTAATAAAAGTACTCTATGGTCGGAAACAGATTTGGCAACTTACACCGTTAAGAATTCCGTCGGTACCGAATGTCCAAAATGCAAAATTAAGTATCCCAATTTAAGAGCTTTGAAAATTCATTATCTCAAATTCCACGAAAAAACATAA
- Protein Sequence
- MDDMDVVEINSYEDACRLCLDTEQTRSSIFGVPDESIPFTEKIQFCLSIKVTSNDKLSTLVCETCIKNINNWHSYKNVCLRSQEKLQQWLSAKLNTSIQPTATIKEEPVDVEFKELNQQTEINDNDINEIASTENGTDVIIENSIVPSPIKEMMVPEESLKTIEKADKGFPTIFDIKTEPLDTEDEDDCNIDVESINSGELLINPMAIAAVNTVGNKDRIMEADSTQKFSTKRFMSRKKGRRGPHTHYRGIRLFKKKCIHCKIYLHSKYSYTQHMSRYHGNKQKSKLSEHVDTSEQLVDTQNDEISPEEAEYEKMIKTDPLTSVQKNLISQLKTFSCYTCNENFFDRRHTLNHIRQHMPDLQPYTCIACLTEFSDRSMYKLHCGASFECAMKIALVVPKIGNEKYFTCNMCLRPFDNRKELLTHLAMHADKQYKQLSQPMRSPPKLKPIAQISSPSRIDLSPHKKSAVNLSGPYVNGDPAHNHMCDLCGMIYKHKINMFKHRELCSTLPESIRTSYRCIHCSVTYLVYKKFYTHIFKDHKKREITCFTCYARFESADDYLTHHETHRITTNNENTNETINIQQPENEFLSDSIDSSNPKDVNEKPYNCALCRESFATKLELSEHRNLHLKVKIYSCVICRSMFSSSGALETHMKDHGIEDSEQNANNSCLEYGRGRRSQNSHNESSLSATSDPGGQFNHCYPCNKNFSNLANLKRHERNLHYQQKRWSCTICKRRFKSAEDHEEHYNLEHGPQAKFAVDPLTPSLVSPLTGKPIMQCPKCPKTFTYQGNLIMHCQNVHKENHFERARATATRQPSVTPRIAPHSYACNICGKTFKQELSLKTHRGWHIRSNYKLKSEKNLNVNKSLDETVMSGPGYTMTMTSSPKPAKARKSFPNNPPQKQLNAISSLQCQVCDDRFPDVAELRKHLWDVHCARNKPEKIFTSDLQCELCTNKFPDEDALENHMKWHSQNPILSNTNSVSAPRIRKKMFNCDICGKDYSNRKLFLRHKKLHKVLPVATMMNLQSLQTKRPYCQACQKSFCTDASLKRHKTSPSHQAHARAYIQQPGKKITTTAIVHHPPTESVKLTSIKKEPGVDYPPINSQSTSGVKKKPVTCLVCQMIFPSMSILYRHKQLVHNFSRAKVPAKMKISSKQTNECVPLVSNEGMICCNVCGRQFPGISNLKQHFAHKHRNKGIDFPCTLPGCKMVFPTTTLLKNHLSAHASIVYNCHLCDRHVFSRASMNKHMMTMHKAIYQSGANKSTLWSETDLATYTVKNSVGTECPKCKIKYPNLRALKIHYLKFHEKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -