Tele041742.1
Basic Information
- Insect
- Theocolax elegans
- Gene Symbol
- ZNF341
- Assembly
- GCA_026168455.1
- Location
- CM047427.1:15991750-15995262[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.059 22 7.7 3.9 1 23 45 67 45 67 0.98 2 13 0.00043 0.16 14.4 6.0 1 23 228 250 228 250 0.99 3 13 2.1e-07 7.8e-05 24.8 0.4 1 23 256 278 256 278 0.98 4 13 0.01 3.8 10.1 1.3 1 23 303 326 303 326 0.96 5 13 0.028 10 8.7 0.2 1 23 332 356 332 356 0.98 6 13 5.6e-06 0.0021 20.4 0.7 1 23 361 383 361 383 0.98 7 13 0.0045 1.7 11.2 3.9 1 23 395 419 395 419 0.91 8 13 0.00021 0.079 15.4 2.0 1 23 421 443 421 443 0.98 9 13 5.4e-06 0.002 20.4 0.2 1 23 449 471 449 471 0.96 10 13 7.2e-06 0.0027 20.0 1.3 1 23 477 499 477 499 0.98 11 13 0.012 4.6 9.8 0.8 5 23 514 532 505 532 0.79 12 13 0.012 4.5 9.9 6.1 1 23 538 561 538 561 0.93 13 13 0.0034 1.3 11.6 2.4 2 19 564 581 563 584 0.94
Sequence Information
- Coding Sequence
- ATGGCGCACTCGATTTTCGATGCTTTATCAGGTGTATCTTTAGATGGATCAACCGTTCAATCTTTGTTAGAGTCGCAGACTTTAATCAGCGAAGTTGAACAATCTGCAATAGATCAAGATGAAGAAGATATATTTCAATGTGGCAAATGTAAGAGTCAATTTACATCTTTGCACCTATTTGTACTTCATAAAAGAGAACATGTAAAAGTTCAAGAACAAACGGTGGATTTGAGTCAGTATTTAGTAAGCAATGATAGTCATGTAGTTCAAACTGATGATAATTGTCAAGATGGCACACAGTACAATCCTGAGGATGACTTCAGTCAGACTCATCAACTTGGTGAACCAATTATTTTAGAAGAAAATGATATACTGTTCAGCATGGACCAGGAAGGTGCTAGCTACTTAACTTCTGATTCAAGTTTTAATGTCCCAATAATTTTAAGTACAGATGGATTAGAATCTTTTGCTAATCCCTCCTTAACAGAAACAGTTAATGATCCTATTAACGATCAAGTTATTGAAATGCAAACATTAGAAAATGATATCAACCAAAATTTGGAAAATAGTGATCTAGTACACAAACCTACCGATCTTGATATCCCACAAATTGATACAAATACTGAAAATCAAGATAGTCCAGAACAAGAGAATAAGTCTGGTCAAACACAAAATTTAAAGTACAAGTGCAGCTACTGCCATAAGCAATTTGCCAAAAAATTTTACTGGCAGCAACATGAACGTTCTCATACAGGGGAAAAACCATATCAATGTGTAGTATGTGGTCGTCCATTTGCCCAGAAGTCCAATGTAAAAAAACACATGTCTTCGCACAAAGTATGGCCAGGAACAGCAATTCATTCATTACCACCCGAAGCACCAGTTGATGGTAGCATCGAACGATCATATCATTGTCAATTTTGCAAAGAAATATTTGATTCGTACAAAGCTTTAAAAGGCCACCTAATAGTATCACACTTGACCTTGAAAGTATACAAGTGTGTGCAGTACGGCTGTGGGTCCATGTTTGCTGAACTCGAAGATTTCCTTGAGCATACGCGTAGTCACAAACGATCCGAGTATCGATGTCACGTTTGTGGTGAAGCTTTCAACACCCTCTCTGATCTCGGACTTCATCAATATACACACTCCGTCCAGAAGCAGAAGACAACTGAAAAATATTATTGCTGCTCCGTATGTAAATCTTCATTCTCAAATCTCGAAGCACTGCAACATCATACAGAAACAACGACACACGATTACGCTTGCCCTCATTGCGGTAAAAGTTTTTTGATCGAAAGGTTTCTCAGACGACACCTCAAGACCCACGCATCATCCGCACGTTTCGCATGCGAGGATTGCGGCAAAGCTTTTAAAACTGAACAGTACCTCGCGAATCATAAGCTCATTCATAGTGAGGAGACACCATTTTCATGTCCCCATTGCCCTGCAAGATTTAAAAGAAAGGATCGTTTAGGTCGTCACATGCTAATCCACGATTTGACGAAACGACTTAAATGTCCATTCCGTGGTCATCTTGGGTGTATGAGCGAATTTTCCAGACCAGATAAACTTAAACGTCACTTACTTACGCATAGCAATATCAAACGTTTCAGTTGTGGTCACTGTAATCGTAATTTTCATCGAGCTCAGGCACTTAAACATCATGAACTTAATAAGCATAGCTTAAAGTGTGACGTTTGTACGCATGCATTTAAAACAAAGGATCAGCTATTAACTCATAATTGTGATCAATCGACGGAGGTTAAAAAGCACTCAACTTCGCAGTTGCCGAAAAAAGCATCTGGATCCTTTAAACCTCGTAGGCCAACCCCAAAACGTCAAATTTCTTCTAAGACTACAGCTTTGAATTCTTCTGATAAAGAGAAAGATAAAATTAAGAATGATGAGATACAAAAAATGCATGTCCCAGAGACTTTAAAACTAGATAATCGAGAGGATGACTTCGATATAAAAATGGAAAATATAGACCTAGATCTTGATCTAAGTAATGAGAGTTCATTAACTTTGGACTCTTTAAAAGCCGTATAA
- Protein Sequence
- MAHSIFDALSGVSLDGSTVQSLLESQTLISEVEQSAIDQDEEDIFQCGKCKSQFTSLHLFVLHKREHVKVQEQTVDLSQYLVSNDSHVVQTDDNCQDGTQYNPEDDFSQTHQLGEPIILEENDILFSMDQEGASYLTSDSSFNVPIILSTDGLESFANPSLTETVNDPINDQVIEMQTLENDINQNLENSDLVHKPTDLDIPQIDTNTENQDSPEQENKSGQTQNLKYKCSYCHKQFAKKFYWQQHERSHTGEKPYQCVVCGRPFAQKSNVKKHMSSHKVWPGTAIHSLPPEAPVDGSIERSYHCQFCKEIFDSYKALKGHLIVSHLTLKVYKCVQYGCGSMFAELEDFLEHTRSHKRSEYRCHVCGEAFNTLSDLGLHQYTHSVQKQKTTEKYYCCSVCKSSFSNLEALQHHTETTTHDYACPHCGKSFLIERFLRRHLKTHASSARFACEDCGKAFKTEQYLANHKLIHSEETPFSCPHCPARFKRKDRLGRHMLIHDLTKRLKCPFRGHLGCMSEFSRPDKLKRHLLTHSNIKRFSCGHCNRNFHRAQALKHHELNKHSLKCDVCTHAFKTKDQLLTHNCDQSTEVKKHSTSQLPKKASGSFKPRRPTPKRQISSKTTALNSSDKEKDKIKNDEIQKMHVPETLKLDNREDDFDIKMENIDLDLDLSNESSLTLDSLKAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00691382;
- 90% Identity
- -
- 80% Identity
- -