Basic Information

Insect: Theocolax elegans
Gene Symbol: -
Assembly: GCA_026168455.1
Location: CM047427.1:21921653-21926189[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.021 8 9.1 1.1 2 23 321 342 321 342 0.95

2 15 0.0012 0.45 13.0 0.6 2 23 406 427 405 427 0.97

3 15 0.00045 0.17 14.4 2.6 1 20 483 502 483 507 0.93

4 15 0.0017 0.65 12.5 0.3 2 23 554 575 553 575 0.95

5 15 5.5e-05 0.02 17.2 3.5 1 23 607 629 607 629 0.97

6 15 3.4e-05 0.013 17.9 0.4 1 20 634 653 634 655 0.94

7 15 0.033 12 8.5 0.3 2 23 666 687 666 687 0.97

8 15 8.9e-06 0.0033 19.7 0.7 2 23 725 746 724 746 0.97

9 15 1.8e-05 0.0067 18.8 1.6 1 23 751 773 751 773 0.95

10 15 6.8e-06 0.0025 20.1 0.6 1 23 779 801 779 801 0.98

11 15 2.6e-06 0.00095 21.4 0.3 1 23 817 839 817 839 0.96

12 15 2.6e-07 9.7e-05 24.6 0.6 1 23 845 867 845 867 0.99

13 15 2.8e-05 0.01 18.1 0.2 1 23 873 895 873 895 0.97

14 15 0.0001 0.039 16.4 4.1 1 23 901 923 901 923 0.96

15 15 0.0074 2.8 10.5 0.4 1 20 929 948 929 950 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.021	8	9.1	1.1	2	23	321	342	321	342	0.95
2	15	0.0012	0.45	13.0	0.6	2	23	406	427	405	427	0.97
3	15	0.00045	0.17	14.4	2.6	1	20	483	502	483	507	0.93
4	15	0.0017	0.65	12.5	0.3	2	23	554	575	553	575	0.95
5	15	5.5e-05	0.02	17.2	3.5	1	23	607	629	607	629	0.97
6	15	3.4e-05	0.013	17.9	0.4	1	20	634	653	634	655	0.94
7	15	0.033	12	8.5	0.3	2	23	666	687	666	687	0.97
8	15	8.9e-06	0.0033	19.7	0.7	2	23	725	746	724	746	0.97
9	15	1.8e-05	0.0067	18.8	1.6	1	23	751	773	751	773	0.95
10	15	6.8e-06	0.0025	20.1	0.6	1	23	779	801	779	801	0.98
11	15	2.6e-06	0.00095	21.4	0.3	1	23	817	839	817	839	0.96
12	15	2.6e-07	9.7e-05	24.6	0.6	1	23	845	867	845	867	0.99
13	15	2.8e-05	0.01	18.1	0.2	1	23	873	895	873	895	0.97
14	15	0.0001	0.039	16.4	4.1	1	23	901	923	901	923	0.96
15	15	0.0074	2.8	10.5	0.4	1	20	929	948	929	950	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTCGAGGTAAATACGTCGGAGGAGCCGCGGCCGCGAGAAGACGAGGAAGTTGGGATGAACCTGATCGACATCTGTCGGATTTGCCTGATCGACAGCCCAGTGATGCGCGATTTATACAACACGGACGATCGATTCTCTGAGAAAGCGATGAATCTTGCCAATGTTAAGATGATGCCTGGAGATGGACTGCCATCACATATTTGTTGTGATTGTTGTGATAAGCTTGACTTAGCATATAAATTTAAACTTCAAGTTGAACAAGCTGATAATGTTTTGCGTGAGAGACTCGACTCTCTTAATATAAAGGAAGAGCTTTTCTTTAGTGATGTAGATGTCAACCTGACATCTGACAGAAATGACCTTACAGCAATAGCAAGTCAGAGTTTATTACTTAAGGATCATATAGATTTGTTGAACGTTCAAAAAATGTCTGATGGAGATGAGGATTTGCCAGTTGAAAACATTGCAAGACATGAAATACAAAAACACGATATAGACAACAATGAGGAACATATGCAATTGCAGGAAGATCGAGTTCTACAGCAAATCACACATGAACAACAGATTCATTTGCAAGAAACCAATGACAATCATGATGAAACATTTGGAGCACAGGAATTGCAAGATATGATGAATGAATATGGAAATCAGGAAAGACTACAACAGGATTTGAGTCAAACTCATCAATTAGCAATGCATGAACACAATTATGTGGCAGAATCACAACCATCTGAAATATCTAATGAAAATGCAGTACTAGTATCTGAGGCCTTGGAAAACAACAGTAAAGAAGATATGGAAAATGTGTCAATGAATGATCAAATGGAAATCTATGACACATCAAAAGAGTTAACTCGTAGAAAAAAGCCTCCAAAAACTCCAGAAAAATCTGTAAGTGTAAATTCAAGTCCAACCTCTTCAAGAACACCAACAAGCGGGAAGCAATCCAATACCTGCCCTCATTGTGGAAAGGTTTACCTTTATATTATTTCATATAATAAACATTTAAAACAACATGTAAAACAACAAGGAGAAGTTAAGGAAGAGCCAATGCCTCTTGAAGTTTCCTTTACTGAAGATGAAGATGCTTTAGATTTTCATGGATACAATGACACTCAAGTAGTGAACTCAGATAGCGAGGAAGAGGCAATAAAAGAGGAAAAGGAAAATTTGAATAAGCAAGTAATTAAGAAACAAAGTTTGACTAAATGCAATGTTTGCGAAGAAGAATTTGAATCTATGGAAGAATTGAGAAACCATAGGTCTAAGCATGTAGTAGAAGGAATTCTTACTGAACAGGATTTATTGACTGGTGAAAGTGAGAAACGTGAAAATGAAGTTATTGAAAACAAAAAAGAAGAAGTAATTGAAGAACCAAACTCTCCATCCAGTCCAACAACCTCAACTCACAGAAAATCTTTACGCCGTCTTAAAAATCATCGGTGCAATCAGTGCCACAAAAGTTTCACTAATGAACTCAGTCTACGAAATCATGTTGTAGCCACCAATCACAAAAATAATATTTTTACCCAAGAAAATGAATCTGAAAAACGAAGTAGGAGAATAGCTGCAAAAGCTGCCCAACGGATAATCGACCAAATAAAAACGGATTTAACTTTTGAAGAGGAAGAACCAAAACGCAAATCGCTCCAGTGTGAAACCTGTGATCAAAAATACCCATCTAAACAGGCATTGAGTAAACATGTAGCTCAGCATGTTAAAGAAGAAGTAAAACGCGAAAATGAGTTGAAAGACGAGGAAGAAGACGATGACACTTATGAAGGTGGTCTTGATTGGCCGATGGAAAGTCACGAATGTCCAACTTGCAAGAAACAATACAGTACGAAAAAATCATTATTAAGGCATCAACTACTCCATGAAGAACCAAATTTCGAGTGTGACATTTGCGGAATCAAATTTTATAGAAAAGATAAGTTAAAAGCGCATTATGATAAATGCTCGGAAAAGAATCCAGACCAGGTTAGGAAGTGTAATATATGTGGCGACAGTTTTGAAAATAATGAAATTTTGAGGGAGCATAGAGCAAAACATGTGATGGAGGGAATTTTAACTGAGGAAGATTTAAGGGAAATTGAACCAAGACCCGAGGATAGGAGTGCGGAAAAAGCGCCAAGAAAAAGAAGAACGGATATTGTTGGATTAGAATGTACTGAATGCAATAAACGATATACCTCGAGGAAGGGATTATTAAGACATATCCAGGTGCACGAAGGAAAGAAGTACCTGTGCGATATTTGTCCAAAAAAATTTTACAGGCGCGAGCATCTCAAGATTCATGTCGCCAAGCATAACATGATTAAACCGTACAAATGCCCAAGATGCCCGAAACGTTTCATTAAAGAGGAACAACTCAACAACCATCTAGCCAAACATGAACGATCTTCGAAAAAAGTCAAAGAATCCGATACTTCAAAACGGTATCTTTGTGAAATTTGTTCAAAAAGTTTCACGCAGTCAACAACCTTAATTGCCCATCTCAGGGCTCACAATGGTATAAAACCATATGTCTGCGAGGTTTGCTCAAGGCCATTCACTACCAATGCCTATCTTAAAATGCACATGAGAACTCACACTCAAGAGCGACCTTACATATGTCAATACTGTTCGCGGGCGTTTGCCAGGGCTGATACTTTGGCTAATCATCTTACATCTCATACTGGTGAAGCCAAGTATCATTGCAAGTACTGTCCCAAAAACTTTCGCAGACTTAAGTCACTGAAAGAACACGTGTTTATACATACTGGACAAAGGCCTTACGCTTGCCCTACATGCGACAGAAGGTTCAACAATAATGGGAGCAGATATGCCCACAGTAAAAGATGCAAACAGAATCTTCTTCAAGGCAGAACATCTCAGATTTCTAATTTAGAGGTATCCGAAGAACCTCAAGAAATCCAAGAGCCTGCAAGTATAGAACAGTCAACGATAAGTCAAGCACAGATTATTAAGCCTCAAAATATCAAGACCATAACTATTACTAGGCCTGATGGTGGATTAACTCAACAGCATGTTATGGCCCATCAAGAAATTTTGATGCCATTAATACTGCCATTAACTGTCACCCTCACAGATGTAGGCGAGGAAGTAATCTTACCTGAAGGCACCAAAATTTTCACTGCATAA
Protein Sequence: MDAVEVNTSEEPRPREDEEVGMNLIDICRICLIDSPVMRDLYNTDDRFSEKAMNLANVKMMPGDGLPSHICCDCCDKLDLAYKFKLQVEQADNVLRERLDSLNIKEELFFSDVDVNLTSDRNDLTAIASQSLLLKDHIDLLNVQKMSDGDEDLPVENIARHEIQKHDIDNNEEHMQLQEDRVLQQITHEQQIHLQETNDNHDETFGAQELQDMMNEYGNQERLQQDLSQTHQLAMHEHNYVAESQPSEISNENAVLVSEALENNSKEDMENVSMNDQMEIYDTSKELTRRKKPPKTPEKSVSVNSSPTSSRTPTSGKQSNTCPHCGKVYLYIISYNKHLKQHVKQQGEVKEEPMPLEVSFTEDEDALDFHGYNDTQVVNSDSEEEAIKEEKENLNKQVIKKQSLTKCNVCEEEFESMEELRNHRSKHVVEGILTEQDLLTGESEKRENEVIENKKEEVIEEPNSPSSPTTSTHRKSLRRLKNHRCNQCHKSFTNELSLRNHVVATNHKNNIFTQENESEKRSRRIAAKAAQRIIDQIKTDLTFEEEEPKRKSLQCETCDQKYPSKQALSKHVAQHVKEEVKRENELKDEEEDDDTYEGGLDWPMESHECPTCKKQYSTKKSLLRHQLLHEEPNFECDICGIKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVMEGILTEEDLREIEPRPEDRSAEKAPRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCPRCPKRFIKEEQLNNHLAKHERSSKKVKESDTSKRYLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNLLQGRTSQISNLEVSEEPQEIQEPASIEQSTISQAQIIKPQNIKTITITRPDGGLTQQHVMAHQEILMPLILPLTVTLTDVGEEVILPEGTKIFTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -