Tele064165.1
Basic Information
- Insect
- Theocolax elegans
- Gene Symbol
- -
- Assembly
- GCA_026168455.1
- Location
- JANSJX010000117.1:51242-53969[+]
Transcription Factor Domain
- TF Family
- SAND
- Domain
- SAND domain
- PFAM
- PF01342
- TF Group
- Other Alpha-Helix Group
- Description
- The DNA binding activity of two proteins has been mapped to the SAND domain. The conserved KDWK motif is necessary for DNA binding, and it appears to be important for dimerisation [1]. This region is also found in the putative transcription factor RegA from the multicellular green alga Volvox cateri. This region of RegA is known as the VARL domain [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.034 8.3e+02 1.7 0.0 44 68 41 65 37 71 0.88 2 11 0.024 6e+02 2.2 0.0 44 68 152 176 148 184 0.85 3 11 0.031 7.7e+02 1.8 0.0 44 67 216 239 211 245 0.87 4 11 0.025 6.2e+02 2.1 0.0 44 69 252 277 249 284 0.84 5 11 0.024 5.9e+02 2.2 0.0 44 69 286 311 282 318 0.85 6 11 0.027 6.6e+02 2.0 0.0 44 69 320 345 315 352 0.87 7 11 0.033 8.2e+02 1.7 0.0 44 67 356 379 353 385 0.87 8 11 0.02 4.8e+02 2.5 0.0 44 69 392 417 389 424 0.85 9 11 0.11 2.7e+03 0.1 0.0 44 68 426 450 422 458 0.83 10 11 0.022 5.4e+02 2.3 0.0 44 69 460 485 445 492 0.86 11 11 0.026 6.4e+02 2.1 0.0 44 68 496 520 493 528 0.85
Sequence Information
- Coding Sequence
- ATGTTTCAGCTCATTACAAGTCGCAGACAGCTTGGAGACACTGTTCTTATTGCAGTGGAGCTAACTTTCAGCTTAAGTGGAGCTAACCTTCAGCTTAAGGTAGCTAAAATGAGCTTAAGTTTCCTTGTTTCAGCTCATTTCAAGCCGCAGACAGCTTGGAGACGCTGTTCTTATTGCAGTGGAGCTAACCTTCAGCTTAAGCTTAAGGTAGCTAAAATGAGCTTAAGTTTCCTTGTTTCAGCTCATTTCAAGCCGCAGACAGCTTGGAGACACTTTTCTTATTGCAGTGGAGATAACTTTCAGCTTGAGGTAGCTAAAATGAGCTTAAGTTTTCTGCTAGTGTGCTTGTTTCAGCTTGTTTCAGCTCATTTCAAGCCGCAGACAGCTTGGAGACACTGTTCTTATTGCAGTGGAGCTAACTGTCAGCTTAAGGTAGCTAAAATGAGCTTAAGTTTCCTTGTTTCAGCTCATTTCAAGCCGCAGACAGCTTGGAGACGCTGTTCTTATTGCAGTGGAGCTAACCTTCAGCTTAAGCTCATTTCAAGCCGCAGACAGCTTGGAGACGCTGTTCTTATTGCAGTGGAGCTAACCTTCAGCTTAAGTGGAGCTAACTTTCAGCTTGAGGTAGCTAAAATGAGCTTAAGTTTCCATGTTTCAGCTCATTACAAGTCGCAGACAGCTTGGAGACACTGTTCTTATTGCAGTGGAGCTAACTTTCAGCTTAAGCTTAAGGTAGCTAAAATGAGCTTAAGTTTCCTTGTTTCAGCTCATTTCAAGCCGCAGACAGCTTGGAGACGCTGTTCTTATTGCAGTGGAGCTAACCTTCAGCTTAAGGTAGCTAAAATGAGCTTAAGTTTCCTTGTTTCAGCTCATTTCAAGCCGCAGACAGCTTGGAGACGCTGTTCTTATTGCAGTGGAGCTAACCTTCAGCTTAAGGTAGCTAAAATGAGCTTAAGTTTCCTTGTTTCAGCTCATTTCAAGCCGCAGACAGCTTGGAGACGCTGTTCTTATTGCAGTGGAGCTAACCTTCAGCTTAAGCTTGAGGTAGCTAAAATGAGCTTAAGTTTCCATGTTTCAGCTCATTACAAGTCGCAGACAGCTTGGAGACACTGTTCTTATTGCAGTGGAGCTAACTTTCAGCTTAAGCTTAAGGTAGCTAAAATGAGCTTAAGTTTCCTTGTTTCAGCTCATTTCAAGCCGCAGACAGCTTGGAGACGCTGTTCTTATTGCAGTGGAGAGAACCTTCAGCTTAAGGTAGCTAAAATGAGCTTAAGTTTCCTTGTTTCAGCTCATTTCAAGCCGCAGACAGCTTGGAGACGCTGTTCTTATTGCAGTGGAGCTAACATTCAGCTTAAGGTAGCTAAAATGAGCTTAAGTTTCCTTGTTTCAGCTCATTTCAAGCCGCAGACAGCTTGGAGACGCTGTTCTTATTGCAGTGGAGCTAACCTTCAGCTTAAGCTTGAGGTAGCTAAAATGAGCTTAAGTTTCCATGTTTCAGCTCATTACAAGTCGCAGACAGCTTGGAGACACTGTTCTTATTGCAGTGGAGCTAACTTTCAGCTTAAGGTAGCTAAAATGAGCTTAAGATTCCTTGTTTCAGCTCATTTCTAG
- Protein Sequence
- MFQLITSRRQLGDTVLIAVELTFSLSGANLQLKVAKMSLSFLVSAHFKPQTAWRRCSYCSGANLQLKLKVAKMSLSFLVSAHFKPQTAWRHFSYCSGDNFQLEVAKMSLSFLLVCLFQLVSAHFKPQTAWRHCSYCSGANCQLKVAKMSLSFLVSAHFKPQTAWRRCSYCSGANLQLKLISSRRQLGDAVLIAVELTFSLSGANFQLEVAKMSLSFHVSAHYKSQTAWRHCSYCSGANFQLKLKVAKMSLSFLVSAHFKPQTAWRRCSYCSGANLQLKVAKMSLSFLVSAHFKPQTAWRRCSYCSGANLQLKVAKMSLSFLVSAHFKPQTAWRRCSYCSGANLQLKLEVAKMSLSFHVSAHYKSQTAWRHCSYCSGANFQLKLKVAKMSLSFLVSAHFKPQTAWRRCSYCSGENLQLKVAKMSLSFLVSAHFKPQTAWRRCSYCSGANIQLKVAKMSLSFLVSAHFKPQTAWRRCSYCSGANLQLKLEVAKMSLSFHVSAHYKSQTAWRHCSYCSGANFQLKVAKMSLRFLVSAHF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -