Tele067704.1
Basic Information
- Insect
- Theocolax elegans
- Gene Symbol
- -
- Assembly
- GCA_026168455.1
- Location
- CM047430.1:12728278-12732739[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.11 1.7e+02 4.0 0.2 31 44 190 204 189 205 0.91 2 2 1.5e-06 0.0024 19.5 0.0 6 38 207 238 204 245 0.83
Sequence Information
- Coding Sequence
- ATGGAGCCTAGAGCAGCTCTGGCTACCACGCAAATGGAAGGGATGCGTTGTTACGAGTGCCACGCGAACGGGCATATTAGCCGCGACTGTCCCAGAAAAAACTCGGGAGAAAAGTTGTGCTACAATTTTAGACAATTTACACGGGACCACAGGGCTGAGAATTGCCCGAATCCTAGCACAAGAGATGCGAGCAACGAGAGACGTGGAAGAGGGCGCGGTTTTATAAGGTATGCGAGATTTAATAAAGAGAATAGAACTTTTGGTTACAAAAGACAATTTGGAAGTGATGAGAGAAATGTTAGAGATGCGAAAAGACAAAAATTTATAACAAATCGAGGAAAATTCAATTCATATAAACCTAAAGGCAGAGGGGCAAGTAATTTGCTAAACTCGTCCAGAAGCAAGGAACCGAAAGCAGGTAAAATTTTAAATACCTTAATTGATGAAACAAATATTACGAATAAATTGGCCAAAACTAAGAAAAAAGCATCTAAAAATATGTCAATGCAAAAGAAAGAGCCTGGTGAAAAATGCAAAAAGAGTAAGACAATGAAGAAAAGAAAAACCAGTACACTGAAAAAGAAAAGAGTGGAAAGGAATTATAGTGTTCAGTCAATCAAAGAAGCTTTAGATGCAAAAGACAAGGGAGGTTCTTTTCGTGAAGCAGCAGCCACCTTCGGAGTCCCCAAGACCACTCTGTTTAGGTTTATAAAAAGTGATAAATCATCACTCAATTCCAAAAAAGGTGCTCCAACAGTGCTCAGTGCGTCTGAAGAAGAGGACTTTGTCAAGTGGCTTCTCTATCGAGCGCCCGCGGGGAAGCATATTGGTTGA
- Protein Sequence
- MEPRAALATTQMEGMRCYECHANGHISRDCPRKNSGEKLCYNFRQFTRDHRAENCPNPSTRDASNERRGRGRGFIRYARFNKENRTFGYKRQFGSDERNVRDAKRQKFITNRGKFNSYKPKGRGASNLLNSSRSKEPKAGKILNTLIDETNITNKLAKTKKKASKNMSMQKKEPGEKCKKSKTMKKRKTSTLKKKRVERNYSVQSIKEALDAKDKGGSFREAAATFGVPKTTLFRFIKSDKSSLNSKKGAPTVLSASEEEDFVKWLLYRAPAGKHIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -