Tele052107.1
Basic Information
- Insect
- Theocolax elegans
- Gene Symbol
- bab1_1
- Assembly
- GCA_026168455.1
- Location
- CM047425.1:15987067-15989672[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8e-07 0.00029 22.4 0.0 2 38 202 237 201 243 0.90 2 4 1.6e-11 2.6e-08 35.4 0.0 3 39 253 288 251 292 0.93 3 4 5.4e-05 0.087 14.5 0.0 6 33 308 334 305 339 0.93 4 4 1e-12 1.6e-09 39.3 0.1 4 39 366 401 363 405 0.92
Sequence Information
- Coding Sequence
- ATGTCTGAGTCGACGACCGTGGGTGCCGACACACAAGTCGACACTTCGTATTGTTTCAAGTGGAGCAATTACCAAAGTCACTTGTCCGAGGTCGTAAGGCAACTTCTCGAAGAAGAATGTATGGTCGACGTTACTTTGTGCGCTGGAGGCGAACGGATCCAAGCGCATCGACTCGTCCTATGCGCTTGCAGTACTTTGTTTCAAGAAATTTTGAGCCACGTTAACGAAGAACATCCTACTATTATTTTGAGTGACATATCTCCAGAAGATGTAAGATCAATCGTCGAGTTCAGTTATAATGGAGAAGTTAGGATACCAGTTGAGAACATCAATAACTTACTGGATGCAGCACATTCTTTAAAAATATGTGGTTTAATGGAAATTGAAGGTCTTGATGAATCAGAAATAAACAATGAAAAAGATGCAAATAATGAAGAAACTTATGTTCTTACTGATATAACTCAAATAAATGATGAAGAAGATTCCATAATTATTAAAGCTGGCAATATTAAACCAAAAGAAATCAAAAGAAGGATTTCAGAAAGTGATTCAGAATCAGCAAAGAAACGCAGACGTAAAAGTGTTAGCAAAAAAGATTACAGTGAGGAAATGTTAGCGAAAGCTATAGCTGACATTCGTGCAGGTAGTTCGTTATTAGATGCAGCATCTAAGAATAATATTCCTAGATCTACACTTTATATGAGAGCAAAAGTATTAGGGATACCATTGAATCCTGCCAGAAGTGAATACACAATTGAAGATATGAAGGGTGCTATTCAAGCAGTTATGGCTGGGTCTAGTTTACAACAAGCATCAGATTGTTATGGAATTCCAAAAACAGTTTTATGGAGGAGAATTCAAAAAGAGGGATGTCAAACTCCTAGACATGACACAAGGAAAAGTTATGGTTCTGAAAGAAGGGAAGCTGCTGTAAGAGCGTTGCAAAGAGGAGATTCACTTACAAAAGTTGCAAATGAATATCAGATTCCCAAAACAACATTATTTCGGGACAAAGCCAAGTTAGTAGATGAAGGAAAATTACCAGGATCTTTCTACAAAAAACGTAAATCAGATGGAGAAGAATATAAGCGAAGTCGTTTAGAAGAGGCTGTGGCTGCTTGTAAAGAAGGAAAAATGTCACAAGCAACTGCTTCTATTAGGTATCAAATACCAAAAACAACTATTTGGAGACGTCTTCAAAAAGATATAAAAAAGACTGAACCATCTAGTCCTACTAAAGACCATATAAAGAAAAAAGAGTCAATAGTACAAAAGAAAACTCAGATAGTTAAAGCAGAAGAATTAAATGAAGCAGATTTTGAACCTTACTGTCCTGATACAGAAATGAATATAACTTACATTGATGAAAGTAATTTGCCAGATGATCCAGTAATAATACTTGCTAGTGGAAATGTAGATGATTTAAATCTACCAAACAGTAGATCTTTAGTGGTGGTACATGAAAGTACTGAGGACAATTTCATATCATGTGGATTGGAGTTAGAGGAAGCTTCAACATTTGAAGCGAAAAGTTAA
- Protein Sequence
- MSESTTVGADTQVDTSYCFKWSNYQSHLSEVVRQLLEEECMVDVTLCAGGERIQAHRLVLCACSTLFQEILSHVNEEHPTIILSDISPEDVRSIVEFSYNGEVRIPVENINNLLDAAHSLKICGLMEIEGLDESEINNEKDANNEETYVLTDITQINDEEDSIIIKAGNIKPKEIKRRISESDSESAKKRRRKSVSKKDYSEEMLAKAIADIRAGSSLLDAASKNNIPRSTLYMRAKVLGIPLNPARSEYTIEDMKGAIQAVMAGSSLQQASDCYGIPKTVLWRRIQKEGCQTPRHDTRKSYGSERREAAVRALQRGDSLTKVANEYQIPKTTLFRDKAKLVDEGKLPGSFYKKRKSDGEEYKRSRLEEAVAACKEGKMSQATASIRYQIPKTTIWRRLQKDIKKTEPSSPTKDHIKKKESIVQKKTQIVKAEELNEADFEPYCPDTEMNITYIDESNLPDDPVIILASGNVDDLNLPNSRSLVVVHESTEDNFISCGLELEEASTFEAKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01428438;
- 90% Identity
- iTF_01428438;
- 80% Identity
- iTF_01428438;