Tele048754.1
Basic Information
- Insect
- Theocolax elegans
- Gene Symbol
- -
- Assembly
- GCA_026168455.1
- Location
- CM047427.1:70766615-70774193[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.3e-12 7e-09 37.2 0.0 1 39 544 583 544 587 0.90 2 4 3.5e-11 5.6e-08 34.3 0.0 2 39 599 636 598 639 0.94 3 4 4.9e-18 7.8e-15 56.3 0.0 2 45 654 698 653 698 0.97 4 4 5.6e-18 8.9e-15 56.1 0.1 1 42 705 747 705 748 0.97
Sequence Information
- Coding Sequence
- ATGGAGATTGAGGGGCGAGGGGTGGGGGGGGGAGGATGTTGGAGGGGAGTGAGGGAAGAGCAACAGCGACAACGAGACGAGCATGTACGAGCGTACGAGCATAGAGATATTGGCGTAAGCAAAATTCGCAAAGCAACGATAAAGCCCAAGGGAGAAAGGAAGCTGACCCAATCGCAGGCTCGTCACCCGGTCGCATCCTCGCCCGAAGGCTGCGCCCACTCCCACACGGCGACCGGTGATTCGGCCTCTCCGGGAGGGCCGCCACGTGCACAGGTGCCAGACACACAGACGGACGGAGAGGATGGCGCACGAGAGCACGAGGGTCGATACGGCCCTGCGAGACCGAGGCCTCCCCCATTCTTCCCGCGGGCGTTTTTCCCTTGCCTACACGCAGCCCCGTCGGCTGTGGCGGAACCTGCGCGCGCGAGCCTTCCCGAGTGTGACACCCTCCCCTCGCGTCGCGGCTGCGTCGTCGCCGTCGTCTGGCCCTCCTCCTCCCGCCCCCTTCCCCCCTCGTTCGAACCGTACACTCTCTCTCTCTCTCGCTCGCTCGCTCGCTCACTCACTCACTTTGCTTTGCGGGGGCTCGGTTTAGAGTATAGTATAGTAGCGCCGGATCGCGAGGCGCGCGTCGCACCTTGCGCGGGGCTGCCACCGTCGCTGCTGAAAACGGCTGATCAGCTGAAAATCAAAGGACTGTGCGAGGCACCGGAAGGTAGAGAGGGCCCTTCGGTAAGCTTGAGCCCACCACCGCGAGACTCGAATACACCGAGACTCAATTTCGCGAAGCTCAAGAGGCATCATCCGCGTTACAAGAGGCCACGTACGAGCTGCGACACTGGGAGTCGAGGAACCGGCAACACGGAGTCGAGACACCTGCAAGCGCATCACCATCACCACGCCGATCCCACGAAATACAAGGACGAAGATTTCGTCGAGAACTACGTCCGTGATTGCAACAAAGAGAATCGTCGAGACTGCTGGCCAGCTGAAGATGACGATTGCATGGAGACGACAGGgacaaccacaacagtagtcctggactcgtgccaacgcagcagcagcgtcggcggcggcggcggaggtggtggtggtggtggaggaggaggaggaggaggaggcgggggtggtggcggtggaggaggtggaggaggagacaacaacacaggcgccaacaacaacgctgcctctgcaacgacgaacaacaacgGTGACATGTTCTGTCACACAGGTCTTGGCCACTACGGCCATCATCCGGATCCAGGCGAGGTCGATTTACCGCCCGAAACGCAGCCCACTCCGCCCAGTGCTACTCTAGTTGGTACCACCATTACTCATCTAAGGGATCAGGACCATCATACGGCAGACATCCAGAATTGCGACAGCGTGAAAATAAAGTTCGAGACGTTGCACACGATGGATTCGTCGGATACGATCGACATCGACAGCCACATGTCTGACCGAGCGAGCGTTAGTTCGAAAAACGCCGATGACAATATGATGATGATAACCCCGGAATTATTGGGTCTGATGCCCTCTGGTAGCTCTGTACATTCAGATTCTGGAGAGAATAATTCACGAAGTCATTCGGGTCAATCGGGATCTCATCATCACGGTTCGAAATCTTGGACGCAAGAAGACATGGATGCTGCACTAGAAGCTCTTAGAAATCACGATATGAGTCTCACCAAAGCCTCTGCGACATTCGGTATACCGTCAACGACGCTATGGCAACGAGCACATCGATTAGGCATCGATACACCGAAAAAAGATGGGCCAACCAAGTCGTGGAGCGACGAAAGCCTAAACAATGCATTAGACGCCTTACGCACAGGCACGATTTCAGCTAATAAAGCATCAAAAGCATTTGGTATACCATCGAGTACACTTTATAAAATTGCGAGGCGAGAGGGCATTAGACTTGCAGCTCCGTTCAACGCAAGTCCAACAACTTGGTCGCCGGCCGACCTCGATCGAGCACTCGAGGCAATACGTTCAGGACAAACTTCGGTACAACGTGCCTCGACGGAATTTGGTATACCTACCGGTACCCTTTATGGACGTTGTAAACGCGAGGGTATTGAGCTTAGCAGGAGCAATCCTACGCCTTGGAGCGAAGATGCTATGACGGAAGCACTCGAGGCCGTCAGATTGGGACACATGAGCATAAATCAAGCGGCGATCCACTACAACCTTCCATACTCGTCACTCTATGGACGTTTCAAACGTGGCAAGTACGAGGAACCAGTAGTTAATGAAATGTCGCAGGATGGTTCATCTCAGCACTTCCATCAAAGCCCGAGCCAAAATCATTCATCCTCCCTCCCAGATCAGATGCCGTATCAGGGCAGCTGA
- Protein Sequence
- MEIEGRGVGGGGCWRGVREEQQRQRDEHVRAYEHRDIGVSKIRKATIKPKGERKLTQSQARHPVASSPEGCAHSHTATGDSASPGGPPRAQVPDTQTDGEDGAREHEGRYGPARPRPPPFFPRAFFPCLHAAPSAVAEPARASLPECDTLPSRRGCVVAVVWPSSSRPLPPSFEPYTLSLSRSLARSLTHFALRGLGLEYSIVAPDREARVAPCAGLPPSLLKTADQLKIKGLCEAPEGREGPSVSLSPPPRDSNTPRLNFAKLKRHHPRYKRPRTSCDTGSRGTGNTESRHLQAHHHHHADPTKYKDEDFVENYVRDCNKENRRDCWPAEDDDCMETTGTTTTVVLDSCQRSSSVGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDNNTGANNNAASATTNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDQDHHTADIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNADDNMMMITPELLGLMPSGSSVHSDSGENNSRSHSGQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSSQHFHQSPSQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -