Basic Information

Insect: Thelaira solivaga
Gene Symbol: -
Assembly: GCA_947397855.1
Location: OX377614.1:58302980-58306517[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.011 0.65 10.8 0.4 3 23 29 50 28 50 0.95

2 5 0.01 0.62 10.8 2.8 3 23 953 973 951 973 0.97

3 5 0.063 3.9 8.4 1.2 1 21 980 1000 980 1001 0.95

4 5 0.0015 0.089 13.5 0.8 2 23 1028 1049 1027 1049 0.97

5 5 0.012 0.75 10.6 0.1 1 21 1054 1074 1054 1075 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.011	0.65	10.8	0.4	3	23	29	50	28	50	0.95
2	5	0.01	0.62	10.8	2.8	3	23	953	973	951	973	0.97
3	5	0.063	3.9	8.4	1.2	1	21	980	1000	980	1001	0.95
4	5	0.0015	0.089	13.5	0.8	2	23	1028	1049	1027	1049	0.97
5	5	0.012	0.75	10.6	0.1	1	21	1054	1074	1054	1075	0.95

Sequence Information

Coding Sequence: ATGCAAGATGCAGAAAATAATTCAGAATTTCAAACATGTGGCGCAATAATGGTGGCAGTCAGAACTAAAGCAATTGCAGTGGCTTGTAATTTTTGCCAACAAACGTTTATACAATTGCCGGCTTTTATGAGGCACTTACAGCTACAGCACAATGATAAACTAAAATTTACAAAGCAGACAAAAGAAGTGGAAGTATATGCCTTTGAAGAATTACTAAATCAAACGACTAATTCGTCTGTAGCTAACATAATAACTGAAGAACATAATTCCACAGAAGATGATGCCGCTTGGCTGAGTGAACATGATATAAAATGGTTACATGAAGGTATTGCACCAAATAAGCAGGAGGATGCAAAGCTTCCAAACATACAATTTGCTGATGATGACGAAACTAATTTGTCCGTATTAACAACTTTTGACAATATAAAAAATACAAGCGTTTCTGAACCTAAAAAAATAACTGATCTCGACAATACACTGTTAAAGGAAATACGCAATGAATGGGAGCATAACGATACTATTTCAAGCCTAATTGATAGCTGTGATACACAAATGTTGAATTCTTTCAACAAGAGAGAAAACATAGAGCTGGATACACAGCACTTAATATATAATAGAGTCATGGTAGATACGCTAGATAAAATTAAAGAAAACTTACAAAAATCAACAAGAGCATTTATAAAAAGTTTGCTGGAAAATTTGGAAAATAATGTAGCAGATATAGAAAAAATATGTAAAACTAGTGCTAATCTCAGTCTCAATTTTACAGATATAAATAATAGCCAATTGGAAGCAAATAATTTTGGGCCTAAGAAAGTTTTATACAAGAATAAAGCTTCAGAAGGAATTAACTGCAACTATGAATCTGATAACTTGGGTTTAAATGATTTGCTTGACAATTCAAAAGAGGAAAAAGAAACTGATCAAATTCTTAGCGAAGATCTTACAAAAGTTTTAGCTGATGCCCTAGATAATGAGGTCTTGGATTTGTTAAATATACCACCAGCAGAAGATATTGAAAATATTTTAGATACAGATATGATTAACTTACTAGAAAATCAATCATTAGACAAAGAAAATGAGACTACTTTCAAAGAATTGAACAAAAATAATACAAAAAAGCAATCACAAGTCTTGAGAGCACCTAACGCAAACAATTTTACAACTAAAAATAAAGTACCAAATGAAAAATTATTGCTTTCAAAAGAGTCCACTTCAGTTAGAGATTCATGTAGTTATTTTAAGGAAAATATGATGCCACTGGCGCAACTCCAACAGTTTGCTTCTAACAAAATGAAAAGTCCAACAAAAGAAATTATTTTCAAAATAAGTCCAAAATCACAAGAAACGTCTATTGAACACAATAATGAAACACCAATAAACTTTAATATGAAAACTACCGGAGAAGAAAAACCCCAACCAAAATCTTCAAGACAAATAAAGAAAAACACTTCAACTCCTAAACGAGCAGTAAAAAAACATACCCATGCACCATTAAAAAAGCTATCAGTAAAATTAGAAAATCTAACCCTCGATAAATTACATGAACAGTGTAATAAACCAAAAAGAAAATTCTTTAAAAGAAGTGAAATTTTTGGAAACAGAAAACAAATTGGTGAAAACAGTACAATACAATCTGTTGAAGAAAATTACAACCTTATGAAAACTCAAATTCACACTACAAATAATTTAGAACTAGAATCAACTTGTATTGATGTACTTCCACCTTCCCAAGGAAATTGTAAAATCCAAGAACGTAAGCCGACAGACAAAAATCTTCCTAACATAAATTTAAAATATAAAAATTTTGCCATAAATCGTTCAACCAGCAAAAATGAAGCTATACAACGAATGCGAAATATTAAAAAGCAAATTGTTAAATCATTAAATGCAGATAGGCGAGCAAATGAAAACAATATTAAAGCGGAAAACAAAAAATCGCCATTTATTATTGAAAATATTCAAATATTACCTAAACTAAAGACAGACGTTATAACATCTATAATGTCCACTGCATCTGCTAATCTATCATTAGGTAATGAAACATCATCTATTACTCAGGACGCTCATTTACTTCAGAAATCTTTAAAAAGATCAGCTTCTTATCCTCTTTTAAATGAACAAAAACAAACCAAATTGCAGCATAAATCGTTAAACCAAGAGCAAGTTATTGAAAAAATATGCAAAGAAGAAGTACCAGAGTTGGATCTTTCAGAAAATGCACAGCAGGATGAGAAAGTGGATCGTTTAAATATTGAAAAAACTTCTGCAGAATCAACTGTTCTTAAAACAGAAACTGAAGACACAAAATATGAAAACTCAGATAATAGTATAATAAACGATTTATTGAAAGAAGTGAGTATAAAGGTTAAGGAAAAACAAATTGAAAATGCAGCACATAAACAACAGTCAGATAACCTTGGAACTAATCCTGATGCTGTGGTAGATTTTGATGATATTAAGGACAATGAGTTATTAGCGAAATTTGGTTTAAAAATTATTAAAATTCCTGAAATTGAAGATGCAATAACCTTGGAAGAACGCGATGAATTGTATGAAAAAGCCTGTAAATTTGCTAATATTTATAAGAACTATCAAAGAGTTTGGTTAGTAAGACATGCTACAATGAAACTGGACTTAAATAAAAGTTTTAATGAGTTATTAATTGCTGTAAATTTAGCATTTAATTTTAATTTAAGCCTAGTTGAACTTAAACGTTTAACAAACCTTATCAATCTTTGGTATGCAAACAATTTCAGTAGTAAACTTATCGACAAGCATAAAATTTCCGAGTCTACAAATCGTTATTTACTTTTATACCATTTTATACCTAAAACAAGTAGACGTTTAATTTTTTGTGAATATTGTGAAGAAAATTTTAATACAGAACATAAATATTTTAAGCATCGTATAACACATACTGGTGCTTTATATCCCTATTATTGTGGAAAATGTGTGACTGGCTTCACAGCACCAAGATATCTAAGAAATCATCAATGTTCATGTAATTTAATAGAAAATAATAAAATGATTAAGACACAATCATCTACATCTTACAGTAGATTAACGCCACAAAAAAATAAGTGTCTAGTTTGTACAAAAATGTTTGCCACATCTGAACTATTATATGAACATAGTAAAACACATTTAAAATGTGTATATAAATGTTATAAATGTAAATTAGTGTTTGCATCTGCCATTGATGCAAAAAGGCATATAAGCATGTGCAAATCTGTAAGCAAAAATATACTAAAACAAAACACGCCACCACACACCTCAAAACCAAAAAGTTATACCAAAAATGATTATACTTAA
Protein Sequence: MQDAENNSEFQTCGAIMVAVRTKAIAVACNFCQQTFIQLPAFMRHLQLQHNDKLKFTKQTKEVEVYAFEELLNQTTNSSVANIITEEHNSTEDDAAWLSEHDIKWLHEGIAPNKQEDAKLPNIQFADDDETNLSVLTTFDNIKNTSVSEPKKITDLDNTLLKEIRNEWEHNDTISSLIDSCDTQMLNSFNKRENIELDTQHLIYNRVMVDTLDKIKENLQKSTRAFIKSLLENLENNVADIEKICKTSANLSLNFTDINNSQLEANNFGPKKVLYKNKASEGINCNYESDNLGLNDLLDNSKEEKETDQILSEDLTKVLADALDNEVLDLLNIPPAEDIENILDTDMINLLENQSLDKENETTFKELNKNNTKKQSQVLRAPNANNFTTKNKVPNEKLLLSKESTSVRDSCSYFKENMMPLAQLQQFASNKMKSPTKEIIFKISPKSQETSIEHNNETPINFNMKTTGEEKPQPKSSRQIKKNTSTPKRAVKKHTHAPLKKLSVKLENLTLDKLHEQCNKPKRKFFKRSEIFGNRKQIGENSTIQSVEENYNLMKTQIHTTNNLELESTCIDVLPPSQGNCKIQERKPTDKNLPNINLKYKNFAINRSTSKNEAIQRMRNIKKQIVKSLNADRRANENNIKAENKKSPFIIENIQILPKLKTDVITSIMSTASANLSLGNETSSITQDAHLLQKSLKRSASYPLLNEQKQTKLQHKSLNQEQVIEKICKEEVPELDLSENAQQDEKVDRLNIEKTSAESTVLKTETEDTKYENSDNSIINDLLKEVSIKVKEKQIENAAHKQQSDNLGTNPDAVVDFDDIKDNELLAKFGLKIIKIPEIEDAITLEERDELYEKACKFANIYKNYQRVWLVRHATMKLDLNKSFNELLIAVNLAFNFNLSLVELKRLTNLINLWYANNFSSKLIDKHKISESTNRYLLLYHFIPKTSRRLIFCEYCEENFNTEHKYFKHRITHTGALYPYYCGKCVTGFTAPRYLRNHQCSCNLIENNKMIKTQSSTSYSRLTPQKNKCLVCTKMFATSELLYEHSKTHLKCVYKCYKCKLVFASAIDAKRHISMCKSVSKNILKQNTPPHTSKPKSYTKNDYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -