Basic Information

Insect: Thelaira solivaga
Gene Symbol: -
Assembly: GCA_947397855.1
Location: OX377614.1:60357339-60360550[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.1 6.2 7.7 3.0 2 20 490 508 490 510 0.94

2 9 0.41 25 5.8 2.3 1 19 519 537 519 542 0.83

3 9 0.039 2.4 9.0 1.9 1 23 547 570 547 570 0.96

4 9 5.8e-05 0.0035 17.9 0.8 2 23 579 600 578 600 0.97

5 9 6.4e-05 0.0039 17.8 2.9 1 23 605 627 605 627 0.99

6 9 5.8e-05 0.0035 17.9 0.7 1 23 633 655 633 655 0.98

7 9 0.0051 0.31 11.8 0.7 2 23 661 682 660 682 0.95

8 9 0.65 40 5.2 1.0 1 23 720 743 720 743 0.90

9 9 6.7e-05 0.0041 17.7 1.6 2 23 750 772 749 772 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.1	6.2	7.7	3.0	2	20	490	508	490	510	0.94
2	9	0.41	25	5.8	2.3	1	19	519	537	519	542	0.83
3	9	0.039	2.4	9.0	1.9	1	23	547	570	547	570	0.96
4	9	5.8e-05	0.0035	17.9	0.8	2	23	579	600	578	600	0.97
5	9	6.4e-05	0.0039	17.8	2.9	1	23	605	627	605	627	0.99
6	9	5.8e-05	0.0035	17.9	0.7	1	23	633	655	633	655	0.98
7	9	0.0051	0.31	11.8	0.7	2	23	661	682	660	682	0.95
8	9	0.65	40	5.2	1.0	1	23	720	743	720	743	0.90
9	9	6.7e-05	0.0041	17.7	1.6	2	23	750	772	749	772	0.96

Sequence Information

Coding Sequence: ATGCGTCGTTGTGCAATTTGTAAAACTGGGTATCTCAAGGGAAGTGGGCAACTATTTCGCGTACCAAAAGATGTTTTCGATAGGAAAAGGTGGAGCAAAATTTGTGGCATAGATTTTAAACCTAGTGCTCTTGTATGTGCCAACCACTTTTCGCCGTCCAGAATTGTGAACGTAAGGAATAAAGCAACACTTTTACGAAATACAGTGCCTTTCATTACTAGTATTGAAGGAATTGATACTTTCTCAGAAATCATACCAAAAAAATATAATGCTCGTACAACGCAGCATCACGAAAATATAATTGTGGAAAATCACTATGAGCAAATAACACAAGATGTATTAATTTCAAATAAAGATGCTACTACTGCAAAACTGCAACAAGAAACCATAGTGGAAATACCAGTTATAAATTCAATTTTATGTTCAACATCGACGCAAACTAATACGCGCCTATGTGGCTTAGTAGAAGTTTCCGAGTTTGCCGATGAATTTCGATTTACTTGTTTCTACTGTGACATGGTATTTCCATTGCAAAAATATAAACATTTTATTAAACACTTAAAGAAGGCACACTTTGAAAATGAAACTGCGTTTAAAGTCTCCGAATATATATCTCTAGACCACGATTATACTCCTAAACGTCCAACGCCACCTGCTTCAGAGGAGTCTAGTTGTAATACAGTTGTTATTAATGCTGGTCCAGCTTCACCGCTACACATTTATATTTCGCCTCCAGAGTCTGCGCTTAACCCGATTGAATCTCGTGTTTTAGACCCAGAGCTTTATTGCATATTAAATAATGAGAGCACCACCAACATCACTACATTGAATAACGTTAATGAAAACTTCACTTCATTGATTGAATTACCCATTTCCGAAAATAAAACTTTTTGTATGTCACATAATTTCAACAAACCTAAAAGCAAATCAATTAAAAGGAGCATTTTAAATAAATATACAATAAACAGTCCGCCAAAGGTGATATTCTCCGGCGTATCATTGTTAAAAGAATCAAATCGGCAATCATTAAAAAAAACAGCTTTAAGTCGCTGCCTTAAAAGGACAAATATGGAAGCAATAAAATCTGAAGATAATGAAAAATATATGGCATTTTCTCTCGAAAATGTGCAACAAAAATCTACAGAGATTGCTTTCGAATATACACCACGTGATGTGGTAGATTCTTTGTTGGATAGTATGAAAATTTATCCTATTTTATGGAAGTTTGATAAAGAACGATTTAATGAAGATTTTTACGATGCTGTCCAAGATTTATGTAAAATTATTAATGAAAAGTGGTCACTGAATATTGATAATTTAAAAATGCGACGCAGCATAAATCGTATTCTAAGATTTTATTGTTATTTATATCCTAATGCCAACATAGAAAATATTCATCAGTTTACCAACTATTATGACAAATGCGCTACTTTTCTGCCTCCTTCTGTAAATGAAATTGCTTATGCACGCTGTTCTCATTGTTATGTATGTTTCAAAAATGATTTCGAACTGAAATCTCATCTTTTAGAAGAATTTAAATATTTACAGTGGCCTTACAAGTGCGTACAATGCAAAGAGTGTTTTAGGGAAAATGATGAATATGAATTTCACAAAATCCTACCACATTATGACGAAATATTTAGATGTGAACCTTGTAAAAAAACATTTGTTCGTCGCAATATATACAATAAACACATGTCGATATATCACCCAATGGGAAAAATTGTCAAACAGAAATGTGATGTATGTGGTAAAGCTTATCAAACCAAGGACAGTTTAAGGACTCATAAAATTAGTCATAGAGAAAGAACATTCAAGTGCCATCTTTGTCCAAAATCTTATTTCTTGAATTCTGAACTAGTACGTCACCTAAAAAGCCATCGTAAAGAATATGATTTTATATGTGAAGTGTGTGGAAAGGCGTTTCTTCTGCAAGCACATCTCAGACAACACATGAAAATGCACACGGAAGCAAAAGTTACTTGCAATATCTGCAATTTAAAATTAAGAAAATCTAGCCTAAGTCGGCATTTGCGATTAGTTCATGTTGCATGTGAAGGCACTCTAGAAGCGACATTTAGAGCAAAAAATTATCATTATAATAGATTTGTACGGCCAAGGCCATCACGTCGAAAAAGGGATTGCGAAAGAAGGCACTACAATTGTAGAATTTGTAAGATAGACTTTGATAATTATAAATCAATTGTAAAACACAACAACGAGTTTCATTTCGATACGCCGAAGTGGCCTTGTGAAATGTGCTACACTCAATTTAGTCAGAAAATAAACTTGAAACGACACTATCGTAAAAAGCATAGCTTAGTAGCGTACCAAGTTTATAAATTAGTTGAACAACACGAGGATTTAAATAAAGTGTTGGGATTGAAAAGCAAAGACTTGGAAAATTATGATGAAAAATCAATTGGTTCACAAATTGAACAGAAGGACGTTGTGGAAACGCACATAAAAACAGAATTCATGCCTGATGATATATATTTTGAAGAAAAAGCTGACAGTTCTACAATACAAGATGAAATTATAACAGTTGCTGACAATATGGGTTCACAAGAAATTAAATTAGAATTTATGAATGACTTCTTTACGGATCTCCTAAAAGAACATCAAAAACATTTATGA
Protein Sequence: MRRCAICKTGYLKGSGQLFRVPKDVFDRKRWSKICGIDFKPSALVCANHFSPSRIVNVRNKATLLRNTVPFITSIEGIDTFSEIIPKKYNARTTQHHENIIVENHYEQITQDVLISNKDATTAKLQQETIVEIPVINSILCSTSTQTNTRLCGLVEVSEFADEFRFTCFYCDMVFPLQKYKHFIKHLKKAHFENETAFKVSEYISLDHDYTPKRPTPPASEESSCNTVVINAGPASPLHIYISPPESALNPIESRVLDPELYCILNNESTTNITTLNNVNENFTSLIELPISENKTFCMSHNFNKPKSKSIKRSILNKYTINSPPKVIFSGVSLLKESNRQSLKKTALSRCLKRTNMEAIKSEDNEKYMAFSLENVQQKSTEIAFEYTPRDVVDSLLDSMKIYPILWKFDKERFNEDFYDAVQDLCKIINEKWSLNIDNLKMRRSINRILRFYCYLYPNANIENIHQFTNYYDKCATFLPPSVNEIAYARCSHCYVCFKNDFELKSHLLEEFKYLQWPYKCVQCKECFRENDEYEFHKILPHYDEIFRCEPCKKTFVRRNIYNKHMSIYHPMGKIVKQKCDVCGKAYQTKDSLRTHKISHRERTFKCHLCPKSYFLNSELVRHLKSHRKEYDFICEVCGKAFLLQAHLRQHMKMHTEAKVTCNICNLKLRKSSLSRHLRLVHVACEGTLEATFRAKNYHYNRFVRPRPSRRKRDCERRHYNCRICKIDFDNYKSIVKHNNEFHFDTPKWPCEMCYTQFSQKINLKRHYRKKHSLVAYQVYKLVEQHEDLNKVLGLKSKDLENYDEKSIGSQIEQKDVVETHIKTEFMPDDIYFEEKADSSTIQDEIITVADNMGSQEIKLEFMNDFFTDLLKEHQKHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -