Tsol010548.1
Basic Information
- Insect
- Thelaira solivaga
- Gene Symbol
- -
- Assembly
- GCA_947397855.1
- Location
- OX377610.1:13538267-13548441[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.053 3.3 8.6 0.7 1 23 1736 1759 1736 1759 0.94 2 12 2 1.2e+02 3.6 1.0 1 23 1921 1943 1921 1943 0.93 3 12 0.00076 0.046 14.4 2.8 2 23 1946 1967 1946 1967 0.97 4 12 0.00027 0.017 15.8 0.2 3 23 1975 1995 1973 1995 0.98 5 12 7.4e-06 0.00045 20.7 5.8 2 23 2002 2023 2001 2023 0.97 6 12 8.5 5.2e+02 1.7 0.1 5 23 2036 2054 2035 2054 0.96 7 12 0.036 2.2 9.1 0.1 2 23 2093 2113 2092 2113 0.96 8 12 8.8e-05 0.0054 17.3 0.4 1 19 2119 2137 2119 2141 0.95 9 12 5.1e-06 0.00031 21.3 1.8 1 23 2149 2171 2149 2171 0.99 10 12 0.00018 0.011 16.4 6.5 1 23 2177 2199 2177 2200 0.96 11 12 0.0011 0.065 13.9 6.4 1 23 2205 2227 2205 2227 0.99 12 12 0.0029 0.17 12.6 5.8 1 23 2233 2255 2233 2256 0.96
Sequence Information
- Coding Sequence
- ATGGGGGAAAATGTTCAGTGTCCCGTATGTACTTTATATCTTCATGCTGGTATGAATCTCTCTGATCACTTGGAGACGCATCCCAAAGAACAAGTGATTCGAGCTTTAGTACAAATGACTATAACCGGCAATAATAATATCTTAACTGGCGAAAGTAGCACAAGCAACGCTGCCAAAAAACCTTCGGCCGATTTAGAAGATAAGTCTTTTTCAAGCACCAAAGATAATGCTCTAAATATTGGCGTAGCAGGTAATAATAGCAGTTCTACTCTAAATAATTCTACCAGCAACAGTTCATTATTAAACCAAAATGCAAATAATAATCAAAATTCGAACAACATATTAAATTTTTCTGATACAAAAATTGAACGGCATCATGCAAAAGAGCAAAATACAATGTCAACATCTTCATCCATTGTGCCGATGCAAACAGTAGTTAAGGCAGAAACGATCAACACAATTGCAGTCGCAAAAAATAATGTTGCTAATGATAACACGAATCAATTCTATTCAAAGCAAAGTTTCAACCAAACAAACTCGACCTCAAACTCAAAAAGTAGTGCAAATCACTCCTATGATCAAAATTCTATAGCACTAACAAATGTAACAAATAATATTCATAACAATTTTAATGTTTTTGGATGTAATACGCGCTATGAACAGCAGCAGCGTAATGGCGCTAATAATCAAGATCAATTACCTACTCCACATATGCCACCTCCACCACCTCCGTCATCTTCGCAGGCTCCAAGTCCTAGTCAACATCAGGAAGGTATAGGCCGCGGAATTTCACCAGGCGGATCTGGTGGAACTTTTAATTCGGTACAGCCACAACAATTGCCACCATCATCCCCACCGCATCACTCGTCATCGCATTTAATCAATTCACCAAGTGGTCAACGCCAGGCGCATATGGTAGGCCAACATCAACAGCCACCTACAAATCCTCACCACTCGCAAAATTTAAAGGTTATATATACACCAAACTTGCCACCTCCGCCTCCACTCCAGCTATTTACTTATCAACCACATACACATTTGCCGCATCATCAGAAACCCCCACCGGCCTATGGCACTGCAATTAGTCAAATTCGATCTCAACATAATCAAAGTAAGCATCAAGTTTCGGGGCCAATGGTAGCACAACAGCAACAACAAACGTTACAAGTTCATTCAGTTTTGCAACAGCAGCTGCATCAACATCAAACTTTGCAACATAGTTTAAGAATTCAAGTACCACCGCCACCGCCTCAACCACTACTTCAAAATCAAACAAAACATTTATGTTCGCCAAAAAATAATGATTTGTCAAGTCAAAGTCATgcagcaacatctaggcataaccaatcgcaacaacatcaagaacaatcgaaggtgaatttatcccagcatcagcaaaatcaacagcaccggctacatcatcaacaacaacaacagaagcagcaacagaagcaacaacaccatcagcagcagcagaagcaacaacaccatcagcagcagcaggaacaacaacaacaaaaacaagaagaacaagaaaaagaaatgcagcaacaacgagatcaacaacaaccgcagctgcagccgcaacatcagcaaaaacaacaacaaagcaAATCGGAAACTGAAAATATTTCAAACAATCACATTTTTAACTCCAACGAAATTTTAAACAAACCATCAATAAGAGCAACATATTCAGCGACATTACAAAATTCAAATGCTAATGTTGCTTCATATTCGCAAGTTTCAATTAGTCCATCTACCACTTCGACATCAATGGCGGCTGTAGCAGCATCGGCATTAGGAAGACATACCAACTCACCATTTGCTGCATTATTAGCAGCGGCTGCAGGTGCTCCGTCTCCATCAAATACATCGTCAGTTTTAAGATACGCAGAGTCCCCTGTAGCTCATTATTTAGAACGAGACAATGGTGATTTTATTGTACAGGAAACTCCCAAACATATCGTTGAATGTGTTGAAACGGACAATGGAGAGTTTTCTGTCATTGAGCGTATATATCAATCACCACCCAGCGTGTTACACATTCATGACGATGGTGATGATGATGTCGATGATAACGCCAACGATGGTGACGACAATGACGAAAATGATAATTGTGAGGACCGCGCTGACGATAAAGAACGTGAAAATACTGATAGTAAATCGGTAAAAAATACGACTAATGATAGTGTTGAAAAAACTTCTAAAAATGATTTGGATGAGAAAAAAGAAAAAACTTTCCCAACAAAAATTAAAACAAACAAGTCAAAAGAGAAAACTAAGTCTGATGATGATCAAAGTTCTGTTAACGATGAATCTGTTGATTTTGTAAGCATTTCTAGTGACAGCAGCGATGAAGAAGAATTTATATCCCAAGGGGAACAGGATGAAAAAAAGCCCAGTGAAAGGAATAAACAAAATTTGACATCTCTGACATCCCTTCTTCCAGCGTCAACAACATCAATACAATCTTCTATAACATCATCATCATCATTATCATCAGCGCCTACATTAGTTACACCAAATGATGATCAACAACCACCAATTTCCTCAACATTAAATGCTTCATTGCATACATCAGTAAACACAGCTTCAGCTCAACAAAATTCTGGAGTCACTACCGCCAGCAACGCCAGTAGTCGAAAAAAATCATCAAAAAATACAATCACAGTTTTAAGTGACGTCCAATTAAATTTGAACGAATATTTAGATTTAGTTGGAAATATAATTGCTTCTAGTAAAGTAGCCGCGCAGCGTAAATCATTGGAATCTGTAACTCCCATACCCTTAGTCAAAATTGAAAAAGAAGAGCCCATGGACGATTATATAACGAACACTACAACATCGTTAGAATCAACAACAACAACATTAACAAATTTCGAAAATACACCACCTTTGAAGGCCAACAAACTTGAGACTGACGAAGTAATTGATAGCCCTAACAGTAGTTATAATAAACAAGCAACAAATAACCATAATGTAATTCTAATAAATAAACTACAGCAAGATGAACAAGAAGAGAAAAAACCTCAAGTTTACACAAGTTCATCATCTGAAACTGATATAACATCTGTCGCCATTTCAAATTCTTGCACCAATCTGACGACGACTAATTCCAGTCATGTTACCAGTGTTATACGTATGGTTACAACTAGTCAACACCAACAACAGGGAAAACTAAGGAATTCCAACGAAGCTGAGGATTTATCGCAACCACAACAGAAAGTTCAATTTTTGACAAATTCCAAAACATTGGGACCCATACCATTAGCCCGTAAAGGTCCCAAAAAATTAGTAATTAAGCCAAAATCTACAAAGACTGAAGCTTTGCGAACCATCACCACTGCAAGTATACCAAATCAGAATCAAAAGAGCAATGATAAAGAAATGCCAACTACTTCCGCTAAAGCTCTGCAACACAATTTTACTGATGCAGATGTAGTAAACACGGCAGAAGTAAAAATTAAAAATGAACCAATCACTTCTATAACATATGATAATCTCCAACACCCTCAATACAAACCACCTACAAGTTTTAGTATTTTAGAGCAGCATCTCAGTTCAAAGGAACCCATTCTTGAGTTTAAAGAGGAGAAGCCGTGCATAACAGAATCTAGTTTGCCGTCAACATCAATAATTAAAGAAATGAAGACAGAAAATAATGTTAATGATGATGCACGTGTTCTATATGATTTTGCAAATTCAAAGAAATGTCATAAGGAAGCTCTATCTACTTTTCCATCTCCATCGTCAGTTTTTTCAAGCCAGCAAACTTCCGTACAGATGACATTAGTCGAAGAGACTCAAAACGAGCAGATTAGTAAAAATATTAATCGTGAAAATGACGCATCAACTTCATCATCATCAACATATTCTACACAATCAGCTTTGGATGTTTCAATTCCACCTGAAGAGCTAAATGAAAGTTCGACGACAAATACTTCGGCTGTTCAGACTCAACATCAAACCAATCATTTGTATACCGATTTTCATTTTAATTATCTCTATAATAATGGCAGTAATAATGCCACACCAGTTCCGTCAGAACAGACCGACATAAAAAACCATCAACAATTTACCTCCTTCTATCAAAATTCTGCTAATAGCAGTAATAATACAATGTTATTGGAAGATTCGTCTTCTAGTAAACAATATACAGATTATCAACAACTTCAGCATAATCATCACTTTTTACAACAACAACATCAGGCTTCTGGGACATCACACGATCAATGGTTTAACAATAACAATTACCAGGCATCGGAAACTAATGTCACCCCAATTACTTTAAATCATTCAGTTTCCAATATAAATAGTAGTTTATCCGTTGATGGTAATACTGTTGCTCTAGATGGCAGCGAAGGTAGTAAATATTTGGATTTAGATTCTTGTAAAAGAGAACAAAACATTGACAATATTGTTGGTGATCGAGTGACCGTTCCAGCACCACCTCCACCATCTTCTTCAACTTCGTGCTCGTTCAATGGTACAACTGACAATAGTATGGCTGGTATCTGCTCAACAGCAGTCACTTTAAATATTAGAACAGATGAAAAAATGCCAGCAAAAGGTGAAATTTCTGAACAAGAAAGCAATTGCGATATAGATAATTCATGGAGTCAACCGATGTATGGCGATATTTCGGCTCGTTTCTTCAAGACAACATTTCCTGGTATATTTCCACAAGACAACGGGTGGAATCATGAAGAATATTTTACAGTACAGGATTTGAGTGCTTCAACAACAGCTCAAGCCACTAACAGCGCCAACAACAGGTTGAAAAGCTTTGAAGCAACAAATAACAGCAGTAACAACAGCAATGGAATACCAATATTTTCCCAAAATACAAATGACAATTGCAATATTGATGTAATGCCATCAACGTCAGCTAAAATAAGAAAGAGACGTAAACGCAGTTCTCAAGATGGCAAAACATCACAAACAAATGGAAAGCGTGCGCAACCAACATCGACAGTAACTTCTCAGCAAATGTTAATACATCAAAATGAGATACCAGGAGTTGAGTTTGGTTTCAACCATCAACAATTGAATCATCAACATAATTTACAACAACATTTACAACAACCAGGTACATCAACCGAATTTTTGGTGGGACCATCTGCCGATAGTATTTCTGGTTTTATGATGCAACAACAAAGGCCGCAACAAAACCAACCACAACAAAAACAACGCACAAAAGTTTATGAATGTGGGCATTGTAATGCCAAATATTCGAAGCTTAAAGATCGCAATGCTCACATGATTGACGTTCATAATTACATACGACAAAATAGAAGACTAGTGTGCCCCACTACTGGACTCGCAACACCTCTAAATCAAACAGATATGCAAGATATTACTATTCCTACAACTAGTGCAGCTGGTAACATGTTAATGCCTGTTTCGGAAAATGTTGATTATATGGGCGATTATAAACAAGGCATAGTAAAAATAGAAAATGAAAATCCTCAACGTGATGCACCTGGCATTGATGCAATCAACGCCAATTTAAGTGCTAAAACTGAAATTACAGAAGACGATAAACAAAATTTGTCTTTAACCATGAATCCATCAAATATTGAAACAATTCATGGGTATGACACTAAAATACAAAGTAATAGTTTGCCATTGTCGCTAACAACTCCCACCAGTAAATTAACAACACTATACCGCATGCTAGTATCGTTCAATATGACAATATTGAAACAAAACCAAAACCTCTCCGATTTCGATGAGAGTCTTATAAAATCATCAATATTTTTTTGTTACATTTGTCGGCAGAATTTTAATTCAGTAAAATTATATGATGCTCATTTAACAGAGCATCCGGCAGAATGTTTTACATGTGGGAAAAAATTCCAGCGATGGAAAAATTTTTCATTGCATTTGAAACGTCACTTGGGTTGGAAAGAATTCGGTTGTACAGTATGCGATAAAAAGTTTGTTGTGAGAAGTGCGCTCGTAGAACATACACGTATGCATTCAGGACTTTCCCCGTTAAAATGTAAAGTTTGTGGTAAGCACTTCAAACGCTATTCGAACTTAACTCAGCATAGGAAACGTCATACGAAACATATTGTTCGTAGAAAAGAGTATGTTTGTTATTGTGGTGAAGTTTTACCATCTAAAGCACGTTTCTTATGGCACAAGGAGACACATGATTCGAAACCAAAGTGTTGTCCGCATTGTTGTGACCGCTTTGTACATGTCAACTCTTTACGCCGCCACATTCGTCTTGCGCATTCGGATAAATTTGATTACACAGAACCAATGGAATGCCCAATATGCAAGCAAATATTTGCTAAAGCTTCTATGAAAGCTCACATGGCTACGCATTCAACAGAAACACAATATGATTGCGCTATTTGCAATAAGTCCTTCTCAACAAAATGGAATTTAAAAATCCACTCTTGGGTACATGCAAATCGCACAGCCAAACCTTTTAAATGTGAACACTGTCCTAAGGCATTTGTGCGTGAAGTTGACTTTAAGAATCATATGAATTCCCACAAACAAATTAAACCGTACACGTGTGAAGTATGTGGGTGTAAATTTATACGCAAATACAATTACATGCGTCATAGAAGAGAACATCATGGCAATAAAAAGTATACCTGTGATCTATGTAAAAAGTCGTTCCATCGCCACTACTATTTAATCGAGCATAGACGCATTCACACCGGCGAACGACCTTTTCAATGTTCTATATGTGGTAAAAGTTCAACAACCAAAACAAATCATAATAAACACTTAAAAATTCATCATTCTCGTGATCCCTTTACTGTGGAAGTTTAA
- Protein Sequence
- MGENVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTITGNNNILTGESSTSNAAKKPSADLEDKSFSSTKDNALNIGVAGNNSSSTLNNSTSNSSLLNQNANNNQNSNNILNFSDTKIERHHAKEQNTMSTSSSIVPMQTVVKAETINTIAVAKNNVANDNTNQFYSKQSFNQTNSTSNSKSSANHSYDQNSIALTNVTNNIHNNFNVFGCNTRYEQQQRNGANNQDQLPTPHMPPPPPPSSSQAPSPSQHQEGIGRGISPGGSGGTFNSVQPQQLPPSSPPHHSSSHLINSPSGQRQAHMVGQHQQPPTNPHHSQNLKVIYTPNLPPPPPLQLFTYQPHTHLPHHQKPPPAYGTAISQIRSQHNQSKHQVSGPMVAQQQQQTLQVHSVLQQQLHQHQTLQHSLRIQVPPPPPQPLLQNQTKHLCSPKNNDLSSQSHAATSRHNQSQQHQEQSKVNLSQHQQNQQHRLHHQQQQQKQQQKQQHHQQQQKQQHHQQQQEQQQQKQEEQEKEMQQQRDQQQPQLQPQHQQKQQQSKSETENISNNHIFNSNEILNKPSIRATYSATLQNSNANVASYSQVSISPSTTSTSMAAVAASALGRHTNSPFAALLAAAAGAPSPSNTSSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVETDNGEFSVIERIYQSPPSVLHIHDDGDDDVDDNANDGDDNDENDNCEDRADDKERENTDSKSVKNTTNDSVEKTSKNDLDEKKEKTFPTKIKTNKSKEKTKSDDDQSSVNDESVDFVSISSDSSDEEEFISQGEQDEKKPSERNKQNLTSLTSLLPASTTSIQSSITSSSSLSSAPTLVTPNDDQQPPISSTLNASLHTSVNTASAQQNSGVTTASNASSRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVAAQRKSLESVTPIPLVKIEKEEPMDDYITNTTTSLESTTTTLTNFENTPPLKANKLETDEVIDSPNSSYNKQATNNHNVILINKLQQDEQEEKKPQVYTSSSSETDITSVAISNSCTNLTTTNSSHVTSVIRMVTTSQHQQQGKLRNSNEAEDLSQPQQKVQFLTNSKTLGPIPLARKGPKKLVIKPKSTKTEALRTITTASIPNQNQKSNDKEMPTTSAKALQHNFTDADVVNTAEVKIKNEPITSITYDNLQHPQYKPPTSFSILEQHLSSKEPILEFKEEKPCITESSLPSTSIIKEMKTENNVNDDARVLYDFANSKKCHKEALSTFPSPSSVFSSQQTSVQMTLVEETQNEQISKNINRENDASTSSSSTYSTQSALDVSIPPEELNESSTTNTSAVQTQHQTNHLYTDFHFNYLYNNGSNNATPVPSEQTDIKNHQQFTSFYQNSANSSNNTMLLEDSSSSKQYTDYQQLQHNHHFLQQQHQASGTSHDQWFNNNNYQASETNVTPITLNHSVSNINSSLSVDGNTVALDGSEGSKYLDLDSCKREQNIDNIVGDRVTVPAPPPPSSSTSCSFNGTTDNSMAGICSTAVTLNIRTDEKMPAKGEISEQESNCDIDNSWSQPMYGDISARFFKTTFPGIFPQDNGWNHEEYFTVQDLSASTTAQATNSANNRLKSFEATNNSSNNSNGIPIFSQNTNDNCNIDVMPSTSAKIRKRRKRSSQDGKTSQTNGKRAQPTSTVTSQQMLIHQNEIPGVEFGFNHQQLNHQHNLQQHLQQPGTSTEFLVGPSADSISGFMMQQQRPQQNQPQQKQRTKVYECGHCNAKYSKLKDRNAHMIDVHNYIRQNRRLVCPTTGLATPLNQTDMQDITIPTTSAAGNMLMPVSENVDYMGDYKQGIVKIENENPQRDAPGIDAINANLSAKTEITEDDKQNLSLTMNPSNIETIHGYDTKIQSNSLPLSLTTPTSKLTTLYRMLVSFNMTILKQNQNLSDFDESLIKSSIFFCYICRQNFNSVKLYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHTRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHTKHIVRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPICKQIFAKASMKAHMATHSTETQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCSICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -