Tsol019066.1
Basic Information
- Insect
- Thelaira solivaga
- Gene Symbol
- -
- Assembly
- GCA_947397855.1
- Location
- OX377612.1:55520330-55527375[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 5.9e-05 0.0036 17.9 0.6 1 21 1251 1271 1251 1275 0.91 2 8 0.0056 0.34 11.7 1.6 1 23 1854 1877 1854 1877 0.97 3 8 8.9e-06 0.00054 20.5 2.5 3 23 1898 1918 1897 1918 0.98 4 8 4.6e-05 0.0028 18.2 1.3 1 23 1924 1946 1924 1946 0.99 5 8 4e-06 0.00024 21.6 0.7 1 23 1952 1974 1952 1974 0.99 6 8 0.017 1 10.1 0.9 1 23 1980 2002 1980 2002 0.95 7 8 0.0089 0.54 11.0 0.0 3 23 2010 2030 2009 2030 0.96 8 8 0.0025 0.16 12.7 3.4 1 23 2036 2058 2036 2059 0.96
Sequence Information
- Coding Sequence
- ATGTTGAAGAATAATGACAACAATCATTCTCAAATACCAGACCATTTTCTATGTGGCGAGGTTTACACTTGGCTGTGTGCAGGGGAATTATATGCGGTGGAATGTAAATTGTGTGAAGATCGTCCTTTATGTCCTCTATCAGAATTTCCTCAACATATGGAAGTTTGGCATACCGATTGGGAAACCATAACAAAAACAACAACACCACAAAATAATGATCATGATGATGACAATCAGCATAATGATGATTATGATTTATTGGCTAAAGAGAATGTCATGTTTTTGTTTGAAATGAACAATAATTTACAAAATGATGAAATAACAAACTATAAAGAAACTCAAGTAAAAAATAATGAAGAAATTTTACAACCTTTCGAACAGGTTCTTATAGAACAAGATCTAACAATAGACGCCACATGTAACAGTGAAGTTGTTAATGAAGAAGCATATTTTACTGATGCAAATGAACAGGTAGCAGAAAGTGAACCCTATCAAATTCAAAAGAAACCGCAACAGAAACAAAAACATACTCTCAATGTAACACTAAAATACCGCAAATATCAGAGAGGGAGAGGTACAATCAAACAAAACACAAATAACGAGAGAAAACTACAGTTGATAACAAAATTAAAACAAGGTACCATGAAACGTGATGTTACTAAGCTACGAAATCAATTAAAACGCTTAAAGTTCCAAATAAAATCCAAGAACAGTGAAAAATTCTTTAAAAAATTTTATAATTTTGAAAGGAATGTTATAAATAAAACAGGAATTGCTAATAAAACAGCAGCAATAGTAACAACCAACAGCTCAGGAAAACAATTTATAGAGTCTAGGAAAATTAGAAAAATTATTAAGGAAAATTTAATAAAAATTCCTGCTAACAAAAAATATTTTAAAAAGATTGTAAAAAACATGGGCGTCTGCCAAAAAATTAATAAAATCACAAATGAAACAAATACTGCCCATTCTAAACAAAGAAATTTAAGAAATAGAAATTATAAATACGAATATAAAACAGAAGCAAATGAAATTGAACCAAATAAAATTGGAAGGAAGAATGGAAAAATTGCCATAATAAGTTTTAACAAAACAAATAAAGCAAAAGGTAAAAGAACTAGAGTAAATAATGAAAGTAAAATTAGAGCAAATGAAACAGAAGTAAGTGAAAATGAAACAGAAGCAAGTAAAAATAAAATAAATAAAGCTGAAACAATTAAAAATGAAACAAGTGGAAATGAAACAATTGGAAGTGAAACAGAACCAAGGGAAAATAAAATAAATACAACTGAAATAATCGAAAAGAAAACAAAACCAAATAGATATGAAACAGAAAAAAGTAAAACCAAAATTGAAACAATTGAAAATGAAACAAGTGGAAATGAAACAGAAAATAAAGCAAATGTTAATGAAATAGCACCAAGTAAAAATAAAATAAATAAAACTGAAACAATTAAAAATGAAATAGAAAACGAAACAAGTGGAAGTGAAACAGAACCAAGAAAAAATAAAATACATACAACTGAAATAATCGAAAAGAAAACAGAAGCTGAGACAAATGGAAATGTAACAAAACATGAAACACGTAGATATGAAACAGAAATAAGTAAAAGTAAAATAAATAACACTGAAACAATTGAAATTGAAACAAATGGAAGTGAAACAGAAGTATTTAAAAATAAAATAAATAAAACTGAAACAATTGAAAATGAAACAGAAACTGAAACAAGTGGAGATGAAACGGAAACATTTAAAGATGGGACAGAAATTGAAACAAACATAAATGAAACTTTACTAATTAAAAATGTAACAGAAAATGAATCCAGTGATAAAGAAACAGAAATAAGCAAAAATAATATTAATAAAACCAAAACAATTCCAAGTGAAACGGCAATAAGTGGCAATGAAACAGAAACAAGGCAAAACAGTATACAATACACAGAAACCGGCGGAATTGAAACAAATTTATGTCAAAGTGAAACAAGGAACACAGAAACATATAGAAATAAAACCAAAAAAAATGGAAATGAAACAGACACCGGTGAAATTGAAACCGATACCAGGAAAAGTGAAACAATTAATACGGAAGCCAATTTAAGTGAAACAGAAACATTTCAAAAGGAAAAAAGCACATTTAAAATGAGCAAAACTAAAGAGAAAAAAGAAACAAACAAGAATGGAACTAATGAAATTAAATATTCCAAATGTTTATTAACAACAAAAATAAAAAATTATTCAAAAGGAAAAGAAAGAAATGAAAATGAAATGAACCAGAAAAATGATAAATTTCTAACGAAACTAGAAAGTTTTAAAAATTTTAGAAAGCGCAGTTGTAAAACCAGCCGAAGGAAATTTAAGAAAAATTGCAAAAGTTCAAAAAAGCAGCAACAAAATGAAATGAAATTATGTGGAAATGAAACAAAACATATGGTATCATGTAAACCAGAAAAGGAAAACTTGGTAGAAAATATTTCTTTAGAATATAAGCAGGAAAACAGCAGAGGTGAAACTTTAAGTCACAAAATTAATCAAATTAAAGCAGAAAAGAAATCTACAAGCTCTATCCGACAAGGTTTAAGATCAAGCAAAAGAGCTAACCAAAACGAAGCTTCCAAAAAAGATATGCAAAGGGCAGCCAGATTACCTACAAGACACAGTTGTAAAAAAGATCATTTTATTTACTATTTTAAAGAAGCACCTTGTGAAAATTCAAAATGTTTACAAAAAGCAGATTTGAAAGATCCACAAGATAGTTTAGCCATTAATGAGGTTTTCCAAAGCTCTAACAATCATAGAAGAATGTTGGATTGTAAAAGAGAGAAAAAAGATTTTAAAATAGCTGGCAATAAGCAGACATTAGAAAGCTTTGTCGAAAACTCTGCTAATGGTGCTATGGAATCTACACATGATATAGTGGGTTGTGCCCATAATAACGATACTAGTACAACAGCCTTCATGGATAAAGATATTAAAAAGTTGGACATTTCAAACTCCAAGGAAAATATTAAGCAACAAAACCAAGAGTTGGATAATTCTTTAAGCTTAAATGCATCAGCTGCGTCGCCTATATCACCGCAAACTGAAGAGGAACATTTTGAATTCTATGAGCCCAAAGAGAAACTAAACAAAGAACACATCAGCCATTTAATAAAGCTCTATCGGGAGCATCCCCGCTTATGGGATCAAGCGCATCCAGATTTCTGTGAGCCACAAATATGCCGCAAGTCCTGGCAACAGATTACTGATCAATGGAATGAATTTTGTAAGCGTAAATTCTCAATAGCAGAGGTACGCATACGGCTCTGCACACTGTGCCAACGTTTTATTCAGGAAAAAGAACGTTTGGCTGCAGAAGGAGAACTGGACGAATATGCTAAATTCCCTTATTATGAGCAAATGCAATTTCTAGAAAAGCAAAAGTCTCTACAAAAAAGACGTCAACTTTATGATACACAAAATAAGAAAATATTAGAGATTTACCAGCAGTTTCCTCTGCTGTGGCACATCAACTGCTACAAATTAAAACAGAGCAAAGAGCGTGCCCAGGCTTTTGAGAGCATAAGCCAAACTTTGAAAGTGTATGATCTACACTTAAGCGCTGTGGGCGTGCAAAAGCGTATATGTTCCCTGAGAAAGTGTTATCGTTTAGAAAAAATACGCCACCTGCATGCCCAAGTAGAGCAAACAACTTTCCAGCCGGAATTTCAACACTACGAGAGAATGCAATTTCTGAATAAACATATTGATCCATTTGTTTGTCATATTTGTGGTAAAATTTTTAAAAATTTACAAAGTTTTCGGGCACATCTAGTTGTTGAAAATCATGGTTGTGTTTTGCCCGAGGAAACTGAAGATGAAAAAAGTGCCAAACAAACTACAGTAGATGCGATGGCAAACAAAGCAAGTAGTTGCTTAGATTTAAAAGAAAAGATTCAGTGTTGTTTGTTGAGTAGCCAAGAGACTGAACTAAATCGCACTCAATCGGAACTATTCATTTTTTCACCGATTAGCAACCACAATCACATAGAATGTTTTTCAGAATCTGAAAATTCTACTGATATTTTAAAAGGATTTACTACATTTTGTTCTACTCTGAAATCAAGCCTGGAGTCACATTTACAACTACTGAACTCAGAGCATTCTTCCCTTTATAATGATGAATGTTTAAATGTTTCTAAAGCAACTGCTGCCGATAATTTGATTGACAAGATTATGGCAAAAGTAACTGAAAATGAGAGTTTAAGCCAAACCGGTTTGGATCAGTTTATAAACTCCTCTGCAAATTATGATAACAACAATTGCTTAACACAGTCAACTTTAAGTTCGCATATTAGTCATACACAAAATGTTTTTGTTGGGTCACAACCTGATGTTATAGCGACACATTCTTTAGATGTTTTAGCTCCCGAGACAAATGGAGAAATTTTTGATGGCGGTATATTTTATTTAGAAAAGTCACCCATTGCGGATCAGCCAGTTATAACAACTGATCCAAATTTATGTGTTTTAAGTTCTCAACCAAACTTGGCCCCAGCTGAAACAATAACAGATTCAAATTTTTACGCCTTAAGATCCCATCGAAATTTTTCCCAAGCTGATACAATAATAGATCCACAGCCTGATATACTAACAAATTCAAATTTATGTCTCTTGACGTCCCAGCCAACTTTTGCTTCACATATTTTGCCAAACAGTATTTCTCTAGTTGTCGAAAAATCAAACTTAACAACAGATTTAATAGTGGAAAATGAAGAAACCATTGCAGAGGAGGCACAAGTTGAAGAAAGTGAAACGATGGTGCCAAGCCCAGAGCCTTCAACTTTATTGCTACCACAATGTTTAGATTTCTGTGCTAAGGACTTCAGTCTTAATGATTCAGAGCATGAATTATTATCTGCTGCGGATACTACCACTTTATCCCTCCCCGATCATTTAATACACAAGATGATAGAACTTTATCGTAAATATCCTCAACTTTGGAACCCTAATCATTTGGATTATAATTCACGTAATTTAAGACGACAAGCTTGGTGCTCGCTAACAGCTGAATTCAATAATGCAACGAATAAAAATTTATCCTGGCGCACAGTGAATCGCAAATTAAGCGATTATTCCAAATACTATAAAAAATTAATAACAGAGCAAAAAGTTTCTATGCCCATGGAAAATAAATGGATATTTTATGAAGATTTCAAATTCATAGATGATGTGATTGCCGTTAATGATGAGCTGCAACGCAACGTTCATCATCGTGATAATAATTTCAAAATTATAGCCATTTACAAAACGTTACCTCAGCTATGGAATATTAAACACCCCGATTTCAACAAACGCTGCACTAAACAGCGCAACATGGAATTAATGTGCAACAGATTGCAAGAGGAAAACAATTTACAATTAACCACTGAACGCCTTAAAATTCGTCTTATTGAGTTAAGAACCCAATATAGAGCGGCAAAAAAGCAACGCTTAAAGTGTATTAAAAATCAGCAAAAATTTTCATATGAAAATTTTGAATTCTATGAAGCTCTCAACTTTTTAGAAGATCACATAGATCCCTTTATCTGTGACAAATGCAAAATCGAATTTAAAAAACTTACTGACTACAATCAACATCTAAAAAGAGAGCATTCTCAAAAAACACGTCTCAAAAACTCGTCTTCTATTGCTGTGTACGGTGCAGAAAACATTTGCCATATTTGTGGCATTGAGTTTACTTCACGAAGCAACTTAGTGCATCATATTAAACGGCACGAAGGCATACGTAATTATGAGTGCAGCATGTGTCCAAAAAAATTTTACGCTTCACATGCCCTTAAAGTGCATATAAGATCTCATACCAAAGAATGTCCCTATACCTGCGAAAAATGTGGCATGTCTTTTGTAAGTGCCAGCAAATTAAATCAACATGTAAAACGTCATTCAAATAGGAAAGATTTCTTATGTGATTTCTGTCCAAAGGAATTTTTTACTGCCTACGAAAAGGCTCGCCATGAAAGACGTCATTTAAATATACGTGATAAGGCATGTTCTATATGTGGCAAAACATTTGTAGCCGGTTCCTCATACTATGCGCATTTAATGTTGCACAGTGGCACAAAACGTTTTGAATGCAATATTTGTACTACGAAATTTGCCCAATATGCGGGTTTGTACAAACACAAAAAAAGACATCATAGCACCTAA
- Protein Sequence
- MLKNNDNNHSQIPDHFLCGEVYTWLCAGELYAVECKLCEDRPLCPLSEFPQHMEVWHTDWETITKTTTPQNNDHDDDNQHNDDYDLLAKENVMFLFEMNNNLQNDEITNYKETQVKNNEEILQPFEQVLIEQDLTIDATCNSEVVNEEAYFTDANEQVAESEPYQIQKKPQQKQKHTLNVTLKYRKYQRGRGTIKQNTNNERKLQLITKLKQGTMKRDVTKLRNQLKRLKFQIKSKNSEKFFKKFYNFERNVINKTGIANKTAAIVTTNSSGKQFIESRKIRKIIKENLIKIPANKKYFKKIVKNMGVCQKINKITNETNTAHSKQRNLRNRNYKYEYKTEANEIEPNKIGRKNGKIAIISFNKTNKAKGKRTRVNNESKIRANETEVSENETEASKNKINKAETIKNETSGNETIGSETEPRENKINTTEIIEKKTKPNRYETEKSKTKIETIENETSGNETENKANVNEIAPSKNKINKTETIKNEIENETSGSETEPRKNKIHTTEIIEKKTEAETNGNVTKHETRRYETEISKSKINNTETIEIETNGSETEVFKNKINKTETIENETETETSGDETETFKDGTEIETNINETLLIKNVTENESSDKETEISKNNINKTKTIPSETAISGNETETRQNSIQYTETGGIETNLCQSETRNTETYRNKTKKNGNETDTGEIETDTRKSETINTEANLSETETFQKEKSTFKMSKTKEKKETNKNGTNEIKYSKCLLTTKIKNYSKGKERNENEMNQKNDKFLTKLESFKNFRKRSCKTSRRKFKKNCKSSKKQQQNEMKLCGNETKHMVSCKPEKENLVENISLEYKQENSRGETLSHKINQIKAEKKSTSSIRQGLRSSKRANQNEASKKDMQRAARLPTRHSCKKDHFIYYFKEAPCENSKCLQKADLKDPQDSLAINEVFQSSNNHRRMLDCKREKKDFKIAGNKQTLESFVENSANGAMESTHDIVGCAHNNDTSTTAFMDKDIKKLDISNSKENIKQQNQELDNSLSLNASAASPISPQTEEEHFEFYEPKEKLNKEHISHLIKLYREHPRLWDQAHPDFCEPQICRKSWQQITDQWNEFCKRKFSIAEVRIRLCTLCQRFIQEKERLAAEGELDEYAKFPYYEQMQFLEKQKSLQKRRQLYDTQNKKILEIYQQFPLLWHINCYKLKQSKERAQAFESISQTLKVYDLHLSAVGVQKRICSLRKCYRLEKIRHLHAQVEQTTFQPEFQHYERMQFLNKHIDPFVCHICGKIFKNLQSFRAHLVVENHGCVLPEETEDEKSAKQTTVDAMANKASSCLDLKEKIQCCLLSSQETELNRTQSELFIFSPISNHNHIECFSESENSTDILKGFTTFCSTLKSSLESHLQLLNSEHSSLYNDECLNVSKATAADNLIDKIMAKVTENESLSQTGLDQFINSSANYDNNNCLTQSTLSSHISHTQNVFVGSQPDVIATHSLDVLAPETNGEIFDGGIFYLEKSPIADQPVITTDPNLCVLSSQPNLAPAETITDSNFYALRSHRNFSQADTIIDPQPDILTNSNLCLLTSQPTFASHILPNSISLVVEKSNLTTDLIVENEETIAEEAQVEESETMVPSPEPSTLLLPQCLDFCAKDFSLNDSEHELLSAADTTTLSLPDHLIHKMIELYRKYPQLWNPNHLDYNSRNLRRQAWCSLTAEFNNATNKNLSWRTVNRKLSDYSKYYKKLITEQKVSMPMENKWIFYEDFKFIDDVIAVNDELQRNVHHRDNNFKIIAIYKTLPQLWNIKHPDFNKRCTKQRNMELMCNRLQEENNLQLTTERLKIRLIELRTQYRAAKKQRLKCIKNQQKFSYENFEFYEALNFLEDHIDPFICDKCKIEFKKLTDYNQHLKREHSQKTRLKNSSSIAVYGAENICHICGIEFTSRSNLVHHIKRHEGIRNYECSMCPKKFYASHALKVHIRSHTKECPYTCEKCGMSFVSASKLNQHVKRHSNRKDFLCDFCPKEFFTAYEKARHERRHLNIRDKACSICGKTFVAGSSYYAHLMLHSGTKRFECNICTTKFAQYAGLYKHKKRHHST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -