Basic Information

Insect: Thelaira solivaga
Gene Symbol: Kr-h1
Assembly: GCA_947397855.1
Location: OX377611.1:78912212-78915109[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0059 0.36 11.6 3.0 1 23 168 190 168 190 0.98

2 8 2.5e-06 0.00015 22.2 0.5 1 23 251 273 251 273 0.99

3 8 3e-05 0.0018 18.8 2.3 1 23 279 301 279 301 0.98

4 8 6.5e-07 4e-05 24.1 2.8 1 23 307 329 307 329 0.99

5 8 1.4e-07 8.4e-06 26.2 1.3 1 23 335 357 335 357 0.98

6 8 0.00019 0.012 16.3 1.5 1 23 363 387 363 387 0.99

7 8 0.86 52 4.8 3.7 1 23 393 415 393 415 0.94

8 8 1.8e-06 0.00011 22.7 0.5 1 23 421 443 421 443 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0059	0.36	11.6	3.0	1	23	168	190	168	190	0.98
2	8	2.5e-06	0.00015	22.2	0.5	1	23	251	273	251	273	0.99
3	8	3e-05	0.0018	18.8	2.3	1	23	279	301	279	301	0.98
4	8	6.5e-07	4e-05	24.1	2.8	1	23	307	329	307	329	0.99
5	8	1.4e-07	8.4e-06	26.2	1.3	1	23	335	357	335	357	0.98
6	8	0.00019	0.012	16.3	1.5	1	23	363	387	363	387	0.99
7	8	0.86	52	4.8	3.7	1	23	393	415	393	415	0.94
8	8	1.8e-06	0.00011	22.7	0.5	1	23	421	443	421	443	0.98

Sequence Information

Coding Sequence: ATGGTTTATTACCCATCCACGCCATTAATTATTAAATCGGAGCAACCTAGTCAGGCGCAAATGTGTGCGCCTCTTAGAAATATTCATGAGTCGCAAACTTCTTCATCAATAACCAACAGCAGTTATATACTTAATAATGTGAATATAACATCAATGCAACAACATCACCAACAACAACAGCATATAACACACAATTTTAATTCCCCAAGTATTACAACAACAACAACAAATCATAATCAACAGCAACAACACTATCATCATCATCAGCAACAATATTTAACAAATATTAAAACTGAATTGCTACCACCGGGTATAACTTTATATGCCACCACACAACCAGCCTCCCTGATATCCCAAAATTTAACTTCACCAGCCACAACACCAACAGCAACGCCAACAACAACACTAACTTTAACATCAACAACAAACAATGTTAGCAGCAGCACACCTTCATCAACTACAACAACAGTGGGACGCAAAAACAATACTAACAAGCCTCAATTTAAATGTGAACAGTGTGGCATGACTTTTGGCAGCAAATCGGCTCATACTTCTCATACAAAATCCCATGCAAAGAATGGTGAATTAAATTTAAAAAAAGTTGGTAATAGCAACCTAAATGGTGTAGATAACTCGACCAGCTCTGTAGCAGCGGGTTTGGAAACAAATGAGGCCACTGTACCATTGGGAATACCAAAGACTCCACAAATAAAGCCTAATGCAACTGCGGCCACAAATGGTGGTGATCCCTATCAGTGTAATGTCTGCCAAAAGACATTTGCTGTGCCTGCAAGACTGattcgtcattatcgtactcatactggagagcgacccttcgagtgtgaattttgtcataaacttttcagtgtcaaagagaatcttcaagttcatcgtcgcatacacaccaaagaacgtccatacaaatgtgatgtgtgtgggcgtgcttttgagcattcaggaaaactacatcgtcacatgcgcatacacacgggtgaacgaccgcacaaatgttcagtttgtgacaaaaccttcatacaatcaggtcaattagtaatacacatgcgcacgcataccggcgaaaaaccttacaaatgtccagtggaaggctgcggcaaaggttttacttgttcgaaacaactgaaagtgcactcacgtactcacacaggtgaaaagccatatcactgcgatatttgtttccgtgattttggttacaatcatgtattaaaattgcacagagtacagcactatggctcaaaatgttacaagtgtacaatttgtgatgaaacgtttaaaagcaagaaagaaatggaggcccatattaagggtcatgctaacgaaatgccCGATGACGATGAAGAGGCAAATATTAATGGCAACGCTACCATCTCCTCAGTATCAATCTCTTCTAGTGCTGAAACAACTTCCGGACCAAATTCACCACAATCACCAAGTTCGAGTCTCGGTAATAATCTTGCTATAAACAATGCAAATAATACGACAAAGGTTCGTAAACAGAGAAAAGAAAAACAAAATAGTAGCCAACTTCCGGCTGCACCTCTAAGTCCTGGATCTCCTGGTTCACCCACATGTTCGTCTATGTCGCCTTCTTCGTCATATGCTTCGGGCTCACGACTGTCAGCAGCTTCACCCACAACTCCAGTGTCCTCACCTACTACCTCTCTAATTTTAGAGGCCGATCATCATAGTCGTGACAGTGGTGTAGCAAGTGGTTCTATTCCTTGCAATAATACTCGGCAATTGGTAGCCGCCTCTTTAGTAGATTTAAGTCATCAGGGAGGTTTTCCCACATCCGATGAAATGCCTACTGATTTAAGTGTTACACAAAATCATCACAACAATGACGAACAGAAATTGCAGCACCACCACCAGCATAATATACACCACCAAGGACATCAACATTTAAGCTATCAATACCAAAGCTCTGCCTCGCCCCAGCATCATATACAACAACAACAAGAACAACAGCAACAGTATCATTACGTAAACAATTCTACGTGTTCATCACATCATACTACAGCATTAAATTCGTCCCATCAACATCACGTACGCTACGATCAACAGCACACTATAAACCCAGCACTTTTAGAAGCTGCCACCATAGCCAGTCGTCGTGAAGATGATGTCCAACAGGCAGCCATACAAATAATGCAACTACATCATTCTCAACAGAAATCGAATAGTAATCAAACTTACAATGACTTTCAACACAACTTAACAAACAACATGCAACATCACAAAGCATTGCCAATGCAACATAATGAAACCCCTCAAGACGTTGTAGTTAAATCAATGGTAATGAATAATTTGACTGAAAATTTTATAGAACATTATAAAAAAGATGAAGTTGCGACAAGGCATGCCGTAGGTTTACATAAGGGTTATGCCCCAGTACCAAAGTTTCAGCCCTCGTTACATGACAACGAGATTATCTTGCGTCAAGTTGAAGCTGCTATAGCACCCTTAAGATCATCAACTGATTCGCCCGACAGATCATCATCTCCCGAAAGTGATATGATGCTAATGGCTGATCGTGATGTCATGACTTTACCGTTAAGAAAACGTAAACTCTATATGAGTGATTGCAACGACGCAAGCGAAAATGAAACCATCAATAACGGTGCTAAAGATCTCCCCAACAACAAAGTAATGAGACATAGTTCAGTTATACAATTTGCAAAAGCCTCATAG
Protein Sequence: MVYYPSTPLIIKSEQPSQAQMCAPLRNIHESQTSSSITNSSYILNNVNITSMQQHHQQQQHITHNFNSPSITTTTTNHNQQQQHYHHHQQQYLTNIKTELLPPGITLYATTQPASLISQNLTSPATTPTATPTTTLTLTSTTNNVSSSTPSSTTTTVGRKNNTNKPQFKCEQCGMTFGSKSAHTSHTKSHAKNGELNLKKVGNSNLNGVDNSTSSVAAGLETNEATVPLGIPKTPQIKPNATAATNGGDPYQCNVCQKTFAVPARLIRHYRTHTGERPFECEFCHKLFSVKENLQVHRRIHTKERPYKCDVCGRAFEHSGKLHRHMRIHTGERPHKCSVCDKTFIQSGQLVIHMRTHTGEKPYKCPVEGCGKGFTCSKQLKVHSRTHTGEKPYHCDICFRDFGYNHVLKLHRVQHYGSKCYKCTICDETFKSKKEMEAHIKGHANEMPDDDEEANINGNATISSVSISSSAETTSGPNSPQSPSSSLGNNLAINNANNTTKVRKQRKEKQNSSQLPAAPLSPGSPGSPTCSSMSPSSSYASGSRLSAASPTTPVSSPTTSLILEADHHSRDSGVASGSIPCNNTRQLVAASLVDLSHQGGFPTSDEMPTDLSVTQNHHNNDEQKLQHHHQHNIHHQGHQHLSYQYQSSASPQHHIQQQQEQQQQYHYVNNSTCSSHHTTALNSSHQHHVRYDQQHTINPALLEAATIASRREDDVQQAAIQIMQLHHSQQKSNSNQTYNDFQHNLTNNMQHHKALPMQHNETPQDVVVKSMVMNNLTENFIEHYKKDEVATRHAVGLHKGYAPVPKFQPSLHDNEIILRQVEAAIAPLRSSTDSPDRSSSPESDMMLMADRDVMTLPLRKRKLYMSDCNDASENETINNGAKDLPNNKVMRHSSVIQFAKAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -