Basic Information

Insect: Thelaira solivaga
Gene Symbol: -
Assembly: GCA_947397855.1
Location: OX377610.1:81926357-81928400[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.3e-06 0.0002 21.8 0.8 2 23 268 290 267 290 0.96

2 8 0.00024 0.015 16.0 3.7 2 23 298 320 297 320 0.97

3 8 9.1e-06 0.00055 20.5 1.8 1 23 340 362 340 363 0.96

4 8 3.6e-05 0.0022 18.6 1.0 1 23 382 404 382 404 0.95

5 8 3.6e-05 0.0022 18.6 0.8 1 23 410 432 410 432 0.99

6 8 6.3e-07 3.8e-05 24.1 3.5 1 23 438 460 438 460 0.99

7 8 7e-07 4.2e-05 24.0 2.5 1 23 466 488 466 488 0.99

8 8 0.00044 0.027 15.1 2.6 1 22 494 515 494 518 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.3e-06	0.0002	21.8	0.8	2	23	268	290	267	290	0.96
2	8	0.00024	0.015	16.0	3.7	2	23	298	320	297	320	0.97
3	8	9.1e-06	0.00055	20.5	1.8	1	23	340	362	340	363	0.96
4	8	3.6e-05	0.0022	18.6	1.0	1	23	382	404	382	404	0.95
5	8	3.6e-05	0.0022	18.6	0.8	1	23	410	432	410	432	0.99
6	8	6.3e-07	3.8e-05	24.1	3.5	1	23	438	460	438	460	0.99
7	8	7e-07	4.2e-05	24.0	2.5	1	23	466	488	466	488	0.99
8	8	0.00044	0.027	15.1	2.6	1	22	494	515	494	518	0.91

Sequence Information

Coding Sequence: ATGAATAAAATAAACAATAAATGTCGAACTTGTTTTAATGAAAATAACAAGGGCATGCAATCTTTGAAAAAAATTATCACGGATGACAACAAACAGCAAAAATCATTTGCTGAGCTCCTTAATGAGGTGGCTAATATTAATATACATAATGATAAATGCTCTAAAATACCACAAGCTATTTGTGGTTGCTGCTCAAGAAAGTTGAAAGCAGCCCATGCATTTGTTCAACAAGCACAGGAAGTTAATGAAAAGTTATATTCAATTTATTCACAATCTGATGATATTAGTAAGCCCATAGACTGTTTACAAGAGGTTCAAATTGATATAGAGCCACCTGCAGATATTAAGGTGGAAGGTGACAGTGTATACGATAACACCAAAGAAAACGATATAACTGCAACAGAATTCTTAAAGAAGGTTATTAAATTAAAGGAGGAAGATCAGGAAGAAGACATTTTAGCTGCAACTTGTACTAAAAGTGAAGAAAATCTTGAAGACAGTAAATATCTAAAAGATTTTTTGGATGTGACATACCCAGATATTGCTATTACTACTGAAACGTCTGATATTGAAGACAATGTTGCGAATGTTTTCCAACAAACCATGAATACATCCGATGTCAATAGTAAATCATCGTCTACTGCAGCTACGGATGATGATGAATGGCAAAGTAAATCCAATAGCTCGGTGAAAAAATCAGTGAAAAAGAAAAAAAAACCTTCAAAGAAAATTAAAAAATCACTTAAGGCTGAAGAAGATAAAGAGAAAGACAAGAACAATGAGGATGAATGGCTGCAAGTTAAATGTAATGATTGTGATAAAATATTCGATAACTCACGTCTATTAAAACAACATTTGCGTCTAAATCATGTGCCAGATGAGTTAAAAATACAATGTCTACATTGTGAAGCAAAATTTAGTCGACGTCATAATATGTATGCTCATATGCGTCGTATTCACAAGACAGAAAACTTGGATGAGCTTAAAATACAAAAAAAACTGAATGCCGAAAAGCAATATGTTTGCCAACAATGTCCTCGATCATATACAAATAAATATAAACTAATAGCTCACGTAAATAGCCATCATAATCCAGAAAATAAAAATCCCCCAAAAGAGAGGGTGTTACTACCTAAGAAACGTTTTCTATGTACACTTTGCGGTTTAAAGTTCGATAGTAAAGGaaatttaaatatacattttagacgacatactggtgagaaaccatttaaatgtgaattttgtgatcgagcatatcctagactatatgatgttacggttcatcgtcgcactcacactggcgaaaaaccatatcaatgtactctgtgtttaaagacttttagaaaatctagcaaattaaaaattcatatgcgtacacatactaacgaacgtccctataaatgcacacaatgtgaaaaggcttttaaacaatcaaaagatttgaatatacacaaacgaacacatactggtgaaagaccttacaaatgtggtgtatgccacagtacgtttacgcaaAGTAATTCATTGCGATTACATCAAATCAAACAACAACATTTGGAAAAGCCAAACACAACAGATAATCCACCGGAAGTATCAACATttacacccatgttctga
Protein Sequence: MNKINNKCRTCFNENNKGMQSLKKIITDDNKQQKSFAELLNEVANINIHNDKCSKIPQAICGCCSRKLKAAHAFVQQAQEVNEKLYSIYSQSDDISKPIDCLQEVQIDIEPPADIKVEGDSVYDNTKENDITATEFLKKVIKLKEEDQEEDILAATCTKSEENLEDSKYLKDFLDVTYPDIAITTETSDIEDNVANVFQQTMNTSDVNSKSSSTAATDDDEWQSKSNSSVKKSVKKKKKPSKKIKKSLKAEEDKEKDKNNEDEWLQVKCNDCDKIFDNSRLLKQHLRLNHVPDELKIQCLHCEAKFSRRHNMYAHMRRIHKTENLDELKIQKKLNAEKQYVCQQCPRSYTNKYKLIAHVNSHHNPENKNPPKERVLLPKKRFLCTLCGLKFDSKGNLNIHFRRHTGEKPFKCEFCDRAYPRLYDVTVHRRTHTGEKPYQCTLCLKTFRKSSKLKIHMRTHTNERPYKCTQCEKAFKQSKDLNIHKRTHTGERPYKCGVCHSTFTQSNSLRLHQIKQQHLEKPNTTDNPPEVSTFTPMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01427949;
90% Identity: iTF_01427949;
80% Identity: iTF_01427949;