Tsol020029.1
Basic Information
- Insect
- Thelaira solivaga
- Gene Symbol
- ZNF212
- Assembly
- GCA_947397855.1
- Location
- OX377612.1:76047861-76050011[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00035 0.021 15.5 0.4 3 23 118 139 117 139 0.92 2 13 0.0052 0.32 11.8 3.3 1 23 145 168 145 168 0.96 3 13 1.6 96 4.0 0.8 2 23 220 242 219 242 0.93 4 13 0.0006 0.037 14.7 2.0 1 23 248 271 248 271 0.98 5 13 2.3e-05 0.0014 19.2 0.3 3 23 280 300 278 300 0.97 6 13 5.6e-07 3.4e-05 24.2 3.1 1 23 306 328 306 328 0.98 7 13 0.00022 0.013 16.1 0.8 1 23 406 428 406 428 0.97 8 13 0.81 49 4.9 4.0 2 23 509 531 509 531 0.95 9 13 0.056 3.4 8.5 2.7 1 22 537 558 537 561 0.91 10 13 2.7e-06 0.00017 22.1 0.7 2 23 567 588 567 588 0.97 11 13 0.00021 0.013 16.2 6.5 1 23 594 617 594 617 0.93 12 13 0.012 0.73 10.6 0.1 1 23 626 648 626 648 0.98 13 13 0.00016 0.0098 16.5 1.0 1 23 654 676 654 676 0.98
Sequence Information
- Coding Sequence
- ATGGCTCATAATTTTCGAAAGGACACCATAAATACTCCACATAGTGCTAATGTATCGCCAAGTAGTGTAACAACATCTGTAGACTACAATGATATTACAAGTGCAACAAAGTGTAATGTAAAAAGAGAAATTGTAGATAATTTAGAAGGTACCAATGAGACGCAAGAAACTGGAATGGAAGACCCTAATATGGCATATGGGGACAAGTCGATCGGAGAAGATGAAAGAAATTGGGATAATTTTGCTATGGATATTTTGCAAGTTGAATATAATGAAGACTCTAATGCAATAGAAATTTTCGATACTGATTCCAATAATCAGAGACATAAGATTTATGAAATTGAAAACAATTGTGTTATTTGCGAAAAGACATTTTCTCGTCAAAGAGAATTAGTGGAACATACTATACAAAGTCATCCTGGTGAAAAAGCATTTAGGTGTCGGCACTGTCCTACAGTGTTTTCAAAACTTAAATCAGTTACAGCTCATTTTAACAGAAGTCATTCCAAGCTGGAAGTTAAGAGACGAATCCGTTCAGAGCCTGACAGACGAGCTCGTAATTGTGAAGTTGATATAAGGGTGTGTGATGGAAATAATTTCTTCAGTAGCAACGGTACATTCGCGAATAGAAAAGGAAAAATTTACTCAATTGAAAACAAGTGTGCTGTTTGTAATATGGAATTTCCCGCTCAAAGAGTTTTTCTTAAACATGTACAACATTATCATCCTGTTGACAAAGCATATAAATGTTTGTACTGTCCAACTGTATTTTCAAAGCTTAAGTCTGTTACTAATCACTACAATAAAAATCATACTAATGTAGCAAAATCAATTGCTTGCGATTATTGCGATATGACATTTTTTAGTCAATTCCTATTAGAACGGCACATACAATCTCATACAGAACATCGTCCATTTTCTTGCACACTATGTGATAAATCCTACAAATATAATAGAAATTTGAAAGTTCACATGAAAACTCATTCAAAAAATGTTAAATCTGTTGATACTAATTGTGAAGAACAATATACGGATGAGTACGGTGAAGACGATGAAAAAGCTCTACTTACTAGAGATCAAAATTGTGAAAATGAGAAACAGTATCGTCAAACTGAAGAAGAACAAAATATTTTAACTGAGGATGATGAAGAAGAATGGATAAATATTTCTGGCCTGACGTCTGCTGAAGGAAATAAATTACTTAAAGTGTATCCATTTAAGTGTAATGAATGCAATATAGCTTACAAGTATAAAGAAGGCCTAAAATCTCACGAATCATCTCACTGGCAAAGTAATGAATTAATATGTGAACCAACAGAAACCATAATTTTAGATGATACATCGGCAAATAGTCAAGATAATATTAACTTTAACAATAGTACTTATTTTATAATAGATGAATTGAATACGGATTATGAAGATTTGGGCGAAGAAGAATTTGTTACAGGAAATTACTTTGATGAATACAATTGCAAAGATTATGCTCAAGAAAATGCGCTAATTACAGAAGATACTTCACAAAATGAATGCGGCATTTGTAAAAAGGAATTTAAGTGCCAGCAAGCAGTTGCGAAACACTTGCAACGCTGCCATGCAGAAGTGGAATTTTTTAAATGCCCTTATTGTGATGACAATTTCTATAGCTTAAACTGCTTATCAGTGCATATAACAATGAAGAAACATCCACAAAAGAGAAATGTTTGTGAAATGTGTCTTAGGTCGTTTGATCGCAGGAGTGATTTAAGACGCCACATAAGAATTCATACTGATGAGCGGCCTTATTCTTGCAACATCTGTCACAAAAACTTTAAGCAAACTAATCATTTAAAACGCCACAAGGAATTAAATCATACTGATGTAAATAGGCCACAAAAATACTCTTGTGACATTTGCGCGAGAACTTTCCTGGTTGAAGAAACACTACAAAGTCACATGGCTATACATGACAGACAAATGCAGTTTCCTTGTTCACTATGCAATAAGGTATTTAAAAGTACATATGATAGGCGAATACATTTAGAAACTCATAGTTGA
- Protein Sequence
- MAHNFRKDTINTPHSANVSPSSVTTSVDYNDITSATKCNVKREIVDNLEGTNETQETGMEDPNMAYGDKSIGEDERNWDNFAMDILQVEYNEDSNAIEIFDTDSNNQRHKIYEIENNCVICEKTFSRQRELVEHTIQSHPGEKAFRCRHCPTVFSKLKSVTAHFNRSHSKLEVKRRIRSEPDRRARNCEVDIRVCDGNNFFSSNGTFANRKGKIYSIENKCAVCNMEFPAQRVFLKHVQHYHPVDKAYKCLYCPTVFSKLKSVTNHYNKNHTNVAKSIACDYCDMTFFSQFLLERHIQSHTEHRPFSCTLCDKSYKYNRNLKVHMKTHSKNVKSVDTNCEEQYTDEYGEDDEKALLTRDQNCENEKQYRQTEEEQNILTEDDEEEWINISGLTSAEGNKLLKVYPFKCNECNIAYKYKEGLKSHESSHWQSNELICEPTETIILDDTSANSQDNINFNNSTYFIIDELNTDYEDLGEEEFVTGNYFDEYNCKDYAQENALITEDTSQNECGICKKEFKCQQAVAKHLQRCHAEVEFFKCPYCDDNFYSLNCLSVHITMKKHPQKRNVCEMCLRSFDRRSDLRRHIRIHTDERPYSCNICHKNFKQTNHLKRHKELNHTDVNRPQKYSCDICARTFLVEETLQSHMAIHDRQMQFPCSLCNKVFKSTYDRRIHLETHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -