Basic Information

Insect: Thelaira solivaga
Gene Symbol: -
Assembly: GCA_947397855.1
Location: OX377612.1:75838395-75847688[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.004 0.24 12.1 2.0 3 23 244 265 242 265 0.96

2 14 0.00015 0.0094 16.6 0.3 2 23 275 297 274 297 0.97

3 14 0.00075 0.046 14.4 2.0 1 23 303 325 303 325 0.97

4 14 5.5e-05 0.0033 18.0 0.7 1 23 331 353 331 353 0.96

5 14 0.0064 0.39 11.5 0.2 3 23 361 381 360 381 0.98

6 14 0.00033 0.02 15.5 1.0 2 23 387 409 386 409 0.94

7 14 0.0055 0.33 11.7 1.5 1 23 415 437 415 437 0.99

8 14 0.0017 0.1 13.3 1.0 2 23 509 531 508 531 0.94

9 14 0.0002 0.012 16.2 0.1 2 23 541 563 540 563 0.97

10 14 0.00044 0.027 15.2 4.0 1 23 569 591 569 591 0.98

11 14 9.9e-05 0.006 17.2 0.7 1 23 597 619 597 619 0.95

12 14 0.0099 0.6 10.9 0.2 3 23 627 647 626 647 0.98

13 14 0.00038 0.023 15.4 0.7 2 23 653 675 652 675 0.94

14 14 0.001 0.062 14.0 3.0 1 23 681 703 681 704 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.004	0.24	12.1	2.0	3	23	244	265	242	265	0.96
2	14	0.00015	0.0094	16.6	0.3	2	23	275	297	274	297	0.97
3	14	0.00075	0.046	14.4	2.0	1	23	303	325	303	325	0.97
4	14	5.5e-05	0.0033	18.0	0.7	1	23	331	353	331	353	0.96
5	14	0.0064	0.39	11.5	0.2	3	23	361	381	360	381	0.98
6	14	0.00033	0.02	15.5	1.0	2	23	387	409	386	409	0.94
7	14	0.0055	0.33	11.7	1.5	1	23	415	437	415	437	0.99
8	14	0.0017	0.1	13.3	1.0	2	23	509	531	508	531	0.94
9	14	0.0002	0.012	16.2	0.1	2	23	541	563	540	563	0.97
10	14	0.00044	0.027	15.2	4.0	1	23	569	591	569	591	0.98
11	14	9.9e-05	0.006	17.2	0.7	1	23	597	619	597	619	0.95
12	14	0.0099	0.6	10.9	0.2	3	23	627	647	626	647	0.98
13	14	0.00038	0.023	15.4	0.7	2	23	653	675	652	675	0.94
14	14	0.001	0.062	14.0	3.0	1	23	681	703	681	704	0.96

Sequence Information

Coding Sequence: ATGACCACCGATGTCACTTCTGAATGTTTAATAAATGGAGTTCAGTTCAAATGCCGTACTTGCTTCGATCCGGGACGAATAATTTATCCCCTTACAGATGAGGCCAGTGGTTCAAAGACTTGGTTCGATCTGTTGAAGGAAATTGCTCAGTTACAGACAAATGATGACGAGCTATTACCAAAGACTTTGTGCTGCAAATGCTTAGAAAAACTTAAAAAATCCTACGATTTTGTGATTCAAATTCAAGATGTGAATAAAAGGTACGCTGAATTATTGACAAAGGATGGGGTTGTAAACGAAGTCGATAATGTTACGGATTGCTTGGCAGAGTCTGCCATTGCTTTGCCATTGGAACAGTATATTCCTGAAATTAAGATGGAAGAGGAGCTGGTCGTATCATATAATATGGATTTAAGTGGTGACAACAAATTTCAAGAAAGAAATTCAGAAAAGTTTATTAATGAAGATACTAATGATCCTTTTACGGAAACATATGATGAAAACGTCAAGTCCCCTTCAGAGAAACTAAATGAAAGTGCAATAGCAATAACTGGAAAAAGGTCAACGAAACCAAAGCGTTGTAAGCAAATACGAACAAATGAAGGTTTGTTCCGCAATCCTGTAAAGCGCACACGTCGAGCTAAACAACCTAAAAATAATATTGAAAAAATATCGCAACCTGACGAAGTGAAAAATTCTGATGATAATGATGAAAAAGAACCAATCATTTGCGATAAATGCACACAAGCATTTTTCACCATACATACATATCAAAGACATCAGCAAACAGAACATTCTTCAGATACAAATGAGGAAAGGAACAAATGTCCGATATGCTCAAAAGAATTTAGAAATAAATTTTATGTTGTTGATCATATAAAAGTTGTTCACGATAAATTAAGGCCGTTTAAATGTTCTCATTGTACGAAAAGTTTTGCGTCCGCTGCTTCCAAAAGAATTCATGAACTTTCACATACAGACAGTTTTCCCTATCCATGTGAATATTGTGACAGACGTTTTCGCCTCTCCAGTAAATTAAAAATTCATTCAGAAATACATACAACTAAACCCGAACTTTTATGTCCCATCTGTAAAAGAAGCCAAAAATCACAAGAAGAATTGGAAGCTCATGTCAAAAATCACGATGATAATCGTTTACAGTGTCCTTCATGTGGTCACCTGTTCAGGAAAAGATCAAATCTTAATGATCACTACAATGCTGTTCATTTGAAACTTCGACCTTATAAATGTGAATTTTGTGAGCTAGATTTTGGTGATCGCAAATCACGACGTGTGCACCAAAGAAGTCACCAAAAGAAAGATCTTTCTAGGATATCTGCAATAGAAATAGCTGCAGAAAGTACAACAAAACGAAATCGTGGTAAAAAAATTAAGCAATCAGATGAACGTAATCCTGTAAAACGCTCAAAAAAAAATAAGCAACCAAAGAAACCCGTAAGAAAAACCATACAACCAGATCAAATAACAAATATTATTGAAGATGATGAAGCAAAAGAAACAATTGTGTGCGATAAGTGTTCACAAACATTTCCCACTATTCACACATATCAAAGGCATCAGCAAGCAGAACATTTTTCAGAAGCAAATGAAGAGAAAAATAAATGCCCCATATGTTCAAAAGAATTTAGAAATAGTTGGTACGTAGTGGATCATATAAAAGTCGTTCATGACAAACTAAAACCCTTTAAATGTTCTCACTGTCCAAAAAGTTTTGCGTCAGCCCATTCCAAACGAATTCATGAACTTACACACACGGATAATTTTCCGTATGCATGCGAATATTGTGACAGACGTTTTCGACTATCCAGTAAATTAAAAATTCATTCGGAAATACACACAACCAAACCTGAACTTTTATGTCCCATCTGTAAAAGAAGTCAAAAATCACAGGAAGAATTGGAAGTACATGTAAAAAATCACGACGACAATCGTTTACAGTGTCCTTCATGTGGTCACTTATTTAGAAGAAATGCACAATTGAAAGATCATTATAATGCGGTTCATTTAAAACTACGTCCTTATAAATGTGAATATTGTGAATTGGGTTTTGGTGATCGCAAAACACGCCGTGTACATCAAAGAACACATCATAAGCAGCAGATTTCTGCATCGTGA
Protein Sequence: MTTDVTSECLINGVQFKCRTCFDPGRIIYPLTDEASGSKTWFDLLKEIAQLQTNDDELLPKTLCCKCLEKLKKSYDFVIQIQDVNKRYAELLTKDGVVNEVDNVTDCLAESAIALPLEQYIPEIKMEEELVVSYNMDLSGDNKFQERNSEKFINEDTNDPFTETYDENVKSPSEKLNESAIAITGKRSTKPKRCKQIRTNEGLFRNPVKRTRRAKQPKNNIEKISQPDEVKNSDDNDEKEPIICDKCTQAFFTIHTYQRHQQTEHSSDTNEERNKCPICSKEFRNKFYVVDHIKVVHDKLRPFKCSHCTKSFASAASKRIHELSHTDSFPYPCEYCDRRFRLSSKLKIHSEIHTTKPELLCPICKRSQKSQEELEAHVKNHDDNRLQCPSCGHLFRKRSNLNDHYNAVHLKLRPYKCEFCELDFGDRKSRRVHQRSHQKKDLSRISAIEIAAESTTKRNRGKKIKQSDERNPVKRSKKNKQPKKPVRKTIQPDQITNIIEDDEAKETIVCDKCSQTFPTIHTYQRHQQAEHFSEANEEKNKCPICSKEFRNSWYVVDHIKVVHDKLKPFKCSHCPKSFASAHSKRIHELTHTDNFPYACEYCDRRFRLSSKLKIHSEIHTTKPELLCPICKRSQKSQEELEVHVKNHDDNRLQCPSCGHLFRRNAQLKDHYNAVHLKLRPYKCEYCELGFGDRKTRRVHQRTHHKQQISAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -