Basic Information

Insect: Thelaira solivaga
Gene Symbol: -
Assembly: GCA_947397855.1
Location: OX377614.1:52686507-52689144[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.2 75 4.3 1.1 1 18 223 240 223 244 0.79

2 11 3e-05 0.0018 18.8 1.7 1 23 270 292 270 292 0.98

3 11 1.8e-05 0.0011 19.5 0.3 3 23 313 333 312 333 0.98

4 11 0.00056 0.034 14.8 1.1 1 23 359 380 359 380 0.96

5 11 1.1e-05 0.00065 20.2 1.0 1 23 386 408 386 408 0.99

6 11 0.0078 0.47 11.2 1.1 1 23 444 466 444 466 0.96

7 11 9.1e-08 5.5e-06 26.7 0.7 1 23 472 494 472 494 0.99

8 11 0.00011 0.007 17.0 3.5 1 23 500 522 500 522 0.99

9 11 1.9e-06 0.00012 22.6 0.6 1 23 528 550 528 550 0.98

10 11 6.8e-06 0.00041 20.8 0.4 1 23 554 576 554 576 0.98

11 11 0.00039 0.023 15.3 0.3 2 23 589 611 589 611 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.2	75	4.3	1.1	1	18	223	240	223	244	0.79
2	11	3e-05	0.0018	18.8	1.7	1	23	270	292	270	292	0.98
3	11	1.8e-05	0.0011	19.5	0.3	3	23	313	333	312	333	0.98
4	11	0.00056	0.034	14.8	1.1	1	23	359	380	359	380	0.96
5	11	1.1e-05	0.00065	20.2	1.0	1	23	386	408	386	408	0.99
6	11	0.0078	0.47	11.2	1.1	1	23	444	466	444	466	0.96
7	11	9.1e-08	5.5e-06	26.7	0.7	1	23	472	494	472	494	0.99
8	11	0.00011	0.007	17.0	3.5	1	23	500	522	500	522	0.99
9	11	1.9e-06	0.00012	22.6	0.6	1	23	528	550	528	550	0.98
10	11	6.8e-06	0.00041	20.8	0.4	1	23	554	576	554	576	0.98
11	11	0.00039	0.023	15.3	0.3	2	23	589	611	589	611	0.95

Sequence Information

Coding Sequence: ATGCATCTTTATATAGTTCACCAGGCCTGCATTACATGTGCAAAATACATACATATTTTTCTACGTACAGAAGAAACTAAAAACGAATTAAGAAATTGGATATATTATACCAACGAGCCCAAAGCCGATCATTGCAATGACTTGAATACTTTTAATGATGAAACTGGCCAACAATTACTTTATATAGATTCCACAACTCTGATCGAAAATGATAATGAACAATCATTTCAATATGATTCTGATGATCTGATATGCAATGAAGCCGAAGACCAAGATCTACAAAATAATGATAAACAGATGGTAAAACAAGGCGAAGAAACGCTTAATGACAATGACGACGCATCGCAACATATTTTGATATTAAGAGAAGCTATTAATGAAAATGGTCAAATGGTAGAAGAGTATTTTTGCCAACTGTGCAAAGTACCATTTAATAGCATCGAAGACTTTCTCCATTATCATCCTAGTATAGAGCTGTTAGATAATAATCTTGATCAAGAAATTGACTTAAGAGTATCTGAAGGTAAATTGTGGGATTTAGTGGAAAATGTAGATGAGGTTCAAAATGAAGTTGAAGACATTATAGAAATAAAGCCAAATATTTCACCAACAGAAGAAAATTATGGGTCTTCAGATCATAATAATGTTGAATTGGAAGATGAACGATATTTTTGCTGTATTTGTCAGCAAGTGTTCACCAATATAATAGCAGCAGAAAACCATGGCTGTATTGATCAACTACAACATTCTGAAGAATTTACAGAGACCGAGTCGACGTTACTTGTGAATAATGTTGATAATAATGCGTACAGATGTGATTTATGCGATAAAGAATATACCTCATTACGTTCATTTACAAATCATCAACGTTGGCATACAAAGTCTCAAAGTCTTGTAGGGTATAATAAGACACTACTGCATGAAGAACCTGCAATTTGTGACATATGTAATACAATATTTGCATCAGAGAAAAATCTAAAATTACACATGAAGATGCATAAAAAACAAGCAGTTAAAACTATACAGGAAGCTTTACCAGTTGGAGCTCAAGAAGAATATAATGAATTAAATAAATTCTTTTGTGAAATATGCAATAAAAGTTTTGATCAAAAACTTTTGGTTATCCACAAGAATATGCATCAAAATTTAAAGGAATACACTTGTGGTAAATGCAATAAACAATTTGATAATTTATCAAATTACGAGATACATTTGCAAATGCATGTAGATAATGAGACGAAGGGCAAAAAAATAAATAACTCCAAAAAGTTAATAGAAATAAACAATTTTGAAAAAGAGCCTGCCGCACATGGTGCAGGTAAAAAAAAGCATGCCTGTCAATATTGTGGTAAAGAATTTTTGCGCCCATATGAAAAAGTAAAACATGAACGTATACACACCGGTGAAAAACCCTACGAATGTGAAGTATGTGGTAAAACATTTAGAGTATCATATTCTTTGACACTACACTTAAGGACACACACAGACATTAGACCGTATGTTTGTGCAACCTGTAATAAACGTTTCAAGCAACAATCTGTTTATGTGCATCATCTAAAAACGCATGAAATTGAGCGTGCCTACAAATGTGAAGTGTGTGGCAAAACTTTTCGTACTTCTGTTCAATTAAGTGGACATAAAAATATTCATAGTAAACCCTATAATTGTCCTGACTGTAGACGACCATTTTCATCTTTGTATGCTGTCAAAATTCATATGAAGACACACAATAAATGCTACAAGTCGAATAAAAATGCCAAAAATAGCTGCAACATTTGTGGTGCGTCATATACCCGTGTATTTGCTTTACGTTATCATATGAAGGAACAACATGACATTGATATAGAACTTAAGGAAATGTTCACAAACAGCAATACTGATACAAATACAAATACGGACAATGAAATTGATGCCGAAACGGAATTATTAATGAATGTCGCCAATGAAGCCAGTAATCAACAATTGGATTCTATAAATACTGATGATTTGGAATACAATGAAAACGATAATGATAATATATTTACTAATCAAGTAGATCATGAAGAAAATATACAAAATACTCTACCAAATAATATCTATTTGAGTGAAACTGAAGCGGCAACGCAAACAATTTTAAATACGGAAGAGATTATTGTTGATCATTTGCCCGCTGAAGAAATTATAACTGATTGGCTATCTAAATAG
Protein Sequence: MHLYIVHQACITCAKYIHIFLRTEETKNELRNWIYYTNEPKADHCNDLNTFNDETGQQLLYIDSTTLIENDNEQSFQYDSDDLICNEAEDQDLQNNDKQMVKQGEETLNDNDDASQHILILREAINENGQMVEEYFCQLCKVPFNSIEDFLHYHPSIELLDNNLDQEIDLRVSEGKLWDLVENVDEVQNEVEDIIEIKPNISPTEENYGSSDHNNVELEDERYFCCICQQVFTNIIAAENHGCIDQLQHSEEFTETESTLLVNNVDNNAYRCDLCDKEYTSLRSFTNHQRWHTKSQSLVGYNKTLLHEEPAICDICNTIFASEKNLKLHMKMHKKQAVKTIQEALPVGAQEEYNELNKFFCEICNKSFDQKLLVIHKNMHQNLKEYTCGKCNKQFDNLSNYEIHLQMHVDNETKGKKINNSKKLIEINNFEKEPAAHGAGKKKHACQYCGKEFLRPYEKVKHERIHTGEKPYECEVCGKTFRVSYSLTLHLRTHTDIRPYVCATCNKRFKQQSVYVHHLKTHEIERAYKCEVCGKTFRTSVQLSGHKNIHSKPYNCPDCRRPFSSLYAVKIHMKTHNKCYKSNKNAKNSCNICGASYTRVFALRYHMKEQHDIDIELKEMFTNSNTDTNTNTDNEIDAETELLMNVANEASNQQLDSINTDDLEYNENDNDNIFTNQVDHEENIQNTLPNNIYLSETEAATQTILNTEEIIVDHLPAEEIITDWLSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -