Tsol018902.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Thelaira solivaga
Gene Symbol
-
Assembly
GCA_947397855.1
Location
OX377612.1:51557124-51561986[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.0021 0.13 13.0 1.2 1 23 216 239 216 239 0.94
2 23 0.11 6.9 7.6 5.3 1 23 245 268 245 268 0.97
3 23 0.0013 0.077 13.7 1.5 2 23 299 320 298 320 0.96
4 23 4.1e-06 0.00025 21.5 0.5 1 23 397 420 397 420 0.97
5 23 0.079 4.8 8.0 2.2 2 23 428 449 427 449 0.97
6 23 8.1 4.9e+02 1.7 4.2 2 21 458 477 457 478 0.90
7 23 0.062 3.8 8.4 0.8 2 20 506 524 505 527 0.94
8 23 4.8e-05 0.0029 18.2 2.2 1 23 606 629 606 629 0.98
9 23 0.13 7.7 7.4 2.9 1 22 637 658 637 658 0.95
10 23 0.22 13 6.7 0.8 2 23 670 692 669 692 0.94
11 23 0.0084 0.51 11.1 4.3 3 23 713 733 712 733 0.96
12 23 0.045 2.7 8.8 0.3 2 19 760 777 759 779 0.95
13 23 0.00017 0.01 16.5 4.6 1 23 831 854 831 854 0.97
14 23 0.45 27 5.7 0.7 1 23 891 914 891 914 0.91
15 23 0.025 1.6 9.6 0.8 2 23 996 1017 995 1017 0.97
16 23 6.4e-06 0.00039 20.9 0.8 1 23 1023 1045 1023 1045 0.98
17 23 1.5e-06 8.8e-05 23.0 2.3 1 23 1051 1073 1051 1073 0.98
18 23 0.00028 0.017 15.8 1.1 1 21 1079 1099 1079 1103 0.92
19 23 0.00044 0.027 15.1 0.3 3 23 1123 1143 1122 1143 0.99
20 23 0.0007 0.042 14.5 3.6 1 23 1149 1171 1149 1171 0.99
21 23 2.7e-07 1.6e-05 25.3 1.1 1 23 1177 1199 1177 1199 0.99
22 23 4.1e-05 0.0025 18.4 3.5 1 23 1205 1227 1205 1227 0.99
23 23 0.28 17 6.3 3.9 1 19 1233 1251 1233 1252 0.94

Sequence Information

Coding Sequence
ATGAGCAATAACGTTAAAAAATGTTTTATCAACGGAGTTCAGTACAAATGTCGTACATGCTTTGATCCGGGTGAAACATTTTACTCTCTTGATGATGAATGTAGCGATTCAAAAACTTGGCGTGATTTATTTAATTATGTTGCAGAGTTAAAGACTAATGATGACAAGCTTCTCCCAAATACTGTTTGCTGCAAATGCTTAGATAAAATTATAAGCTATTACGATTTTATACTCTATATTAAAAATGTAAACAACAAATATTTGCAACTATTGGCCAATGGTGATGGTCCTGTGCAAGATGGGGTATTAAGCGTATTTAACAACTTTACTGACTGTTTGGCTGAATCTGCTATTGCTTTGCCGATGGCTCAATTTGTATCGGAAATCAAGTTTGAAGAGGAATCGGTAGGTTCATATGATATCGTTGATAATAACATAAAAGAAGACGATAGTGTAGAAAAAGATACTTATGATCCGTTCCAAGAAACTTGTGATGAGGATGTTAAATTACCATTAAATGAGCTACATGACCAGCAAAGTTCTTCATCGTCAAACGAAAGCGAGTATACCCCATTTCTAAGTCAAGAATTGGATAAGGACAAATTTACATCAACAAATTTTCAAATCAAAAAAGCTAACGGTCGTTTCGTATGTCCCATATGTACGAAGTCATTTACTGCAAAAGTATATTGTCGACGACATATAAATGCAATTCATGGTCAAGAACAAGAATTTATTTGTGGGTTCTGTGGGCACCGTTATAGATGTAAAAGGTATTTAACGGCGCACATCAGACGAATGCATCCTGGAGAATCTTTTATTACTAATATGAAAAAACTTGTTTTGCTATATGGAGATCGCTTGTATAGCAAGCCTGTTCCTTGGATTTTTGTTGAATGTAAACTGTGTGAAACTTCTGTTAGAACATCGTATGAACTTCGTCATCACTTGCAAAATCACAGTAATCCTTATACTCTTGAAAATTTAGAACTTAACAGCAGAATTGTTCAGCACTGGTTTTCGGATATACATGATTTGAACGTTATCAAGGAAAAAATATGCAACGATATTCGTGAAAATGATTGGTTTAAATATTATACAGTATTAAACGAAAATTCCTTTGAAATGTCTGTTAGTGATACGGAGGTAGAAGATTTAGAGGATGGCCCTGCTGATCGTATATGTAAATACAAATGTGAATTATGTGGCAAAGCATTTTCATATAAATACGAAGTGTTTGCTCATATGAAAGAAGATCATATTAAGGATGATATTGCTTTGAAATGCAAACGTTGTAAATTAGAATTTGTATCCATAAAGATGTACGAAAATCATAAAAAAACCCACTGCCGAAATAAATATAAAAATTGTCATTGTTCTTATTGCCCGGGCAAATTTGTTAGCACCGAAAGTATGAATAATCACAAGTGTATACAGAGTATTCCAGATAACTCTAAAGCTGTAAAAAATGTGATGACAGGCAATGAAAAATTATTGGCATCAACAATTATAATTCAATGCTGTCTTTGTGAAATGGTATTTGAAAAGCTTCGAGATTTACGCCAACATATGCCATTACATGAAGATGGTAAAACTGGAATTGACTTTAAAAATTGCATGTATGTAAAGCAATTTTTAAACGCTGATTCTATTGACTTTGGAATGCTGCAGCAACAAATAAAAGAGGCATTTATTAAACGCCAAATTAGTTATTTTTATCAAGCCATCGATAAACATGGTAATGAAATGGATATTTCAGATTCGGATTCGGATAGCTCTACAGAGAATGTTGTAACTAAAAATGAAAGAAAGATTTACACGTGTGACCTTTGTAAAGAAATATTCAGAAGACGAAAACTTTTATTAAACCATCAACGAAAGCAGCATTCTGAAAATGATCAAATGCCACATACATGCGAGCATTGCAGTCAGCAATACATTAGCATCCATTTGCTGCAACAGCACTTGAAAAGGGAATGCTGGAATGAACAACGCCGAATAGCTACAAAGTGCGATCAATGTAATGCACGTTTTATATGGAAAAGTAATATGTTAAAACATAAAGAAATTCAGCATCAAAGCTCGGAGAGGAGTATAAAAAGGCAAGGTTCTTACTCCGGTGTTCAGCTTCGTTACTGTTTCTTATGCCCGAAAACATTTTTTAGCACTAAACAACTAAACCACCACTTAAGTCGGCATCAGTTGAACCCATCCGCTATTAAAACAGTTGAAAGTATAGTGCATTCCACATGGTGGCCAAATGGTAGAAAAATAATAAAATGCAAAGTATGTGATCTTGAATTTAGAAGCATGGCCAAATTGAGAGAACATTTTTTTGAACCTTGCTGTGGAAAACAGCATTCGCTGGTTAATTACTCAATTGTTAATCAAAAAGGCTTTGAACTACATTTAGAACTGGATTCTGAAACAGATGATGAAGAGAGTGCAGAAACTAAAAATAATGACAGAAATATAAAATCTTTACTTCCATATGATTGTTGCATGTGCGGCAGGTCGTTTAAGAGGAAATATCAAATTTCTCAGCATCAACGGTCTATGCACAATTACGAAATGTTGGAGCTCAAATGCGAACGTTGTTTTTATAGGACTGTCTCACAGaaagtcctggattatcatagaaatactcaatgtttcaatattgaaaagaaatacaaatgtgatcagtgtaattttaaatttatgtgggaagaaaatctagataatcatgttgcaaagtttcatagtgcaaaaggttatgaaaaagTTATGAACACCTTAACCATGGAAATATCTGGTCCGGATGAGGTGTCAGTAAATAATTCACAATCAATGTCTGATAAAAACATTTTGAATTTGGATAGTTGCAAACAGTCCACGTCAACAGGAAAAAAATTTAAAAAGGGTTTACTTAACAATTGTGACGTGCCCACTACTTCttcatatcttgaagaacgtgttaagagaaacaagattaaagaatctttaaaatgtaattcatgcgaaatcacatttctatcgtcagctgatcaaaagaagcacatacgtacccacactctggaaagtaactttaaatgtgatatttgcggtaaatcatttacgggaaatcgcaaattaactattcacaaacttatacataccggagaacgacctttccattgtaaaatttgtcagaaatcatttaataacccagctaatttgaaacaacatgagcgcattcataaacctgaaaacccctacaaatgcaatgtatgtcagaaaactttcaagatagactcatatctaaaagcacatagaaaagctacaggacatagtgataatgctgatttaaatgacacccagcaacctttgcttaaagagataaccttgtgccccatatgcggtaccgctttgtctagcaaaacaaatcttaaatttcatatgagaatccatacaggtgagagaccatacaagtgcgatctctgcgaaaaaacttgtgccagaaaatttgatttagatcttcacaaacgaacacattttactgatcgtccctttaaatgtacaatgtgtgaaaaatcctttattaggccgggcaaattaaaggatcacatgcgaatgcatactggcgaacgtccctttcaatgcaccatctgtcagaaaaaatttaatagaaagttgtatatgcaacgtcatttacttactcacaaagatgtaaaacccttcacgtgtgagatttgcgatcggagatttacgtgtgctgcatatttgaaaacacattgtgtCAAACAAGGCCATTTCATGAAAAATGATTGA
Protein Sequence
MSNNVKKCFINGVQYKCRTCFDPGETFYSLDDECSDSKTWRDLFNYVAELKTNDDKLLPNTVCCKCLDKIISYYDFILYIKNVNNKYLQLLANGDGPVQDGVLSVFNNFTDCLAESAIALPMAQFVSEIKFEEESVGSYDIVDNNIKEDDSVEKDTYDPFQETCDEDVKLPLNELHDQQSSSSSNESEYTPFLSQELDKDKFTSTNFQIKKANGRFVCPICTKSFTAKVYCRRHINAIHGQEQEFICGFCGHRYRCKRYLTAHIRRMHPGESFITNMKKLVLLYGDRLYSKPVPWIFVECKLCETSVRTSYELRHHLQNHSNPYTLENLELNSRIVQHWFSDIHDLNVIKEKICNDIRENDWFKYYTVLNENSFEMSVSDTEVEDLEDGPADRICKYKCELCGKAFSYKYEVFAHMKEDHIKDDIALKCKRCKLEFVSIKMYENHKKTHCRNKYKNCHCSYCPGKFVSTESMNNHKCIQSIPDNSKAVKNVMTGNEKLLASTIIIQCCLCEMVFEKLRDLRQHMPLHEDGKTGIDFKNCMYVKQFLNADSIDFGMLQQQIKEAFIKRQISYFYQAIDKHGNEMDISDSDSDSSTENVVTKNERKIYTCDLCKEIFRRRKLLLNHQRKQHSENDQMPHTCEHCSQQYISIHLLQQHLKRECWNEQRRIATKCDQCNARFIWKSNMLKHKEIQHQSSERSIKRQGSYSGVQLRYCFLCPKTFFSTKQLNHHLSRHQLNPSAIKTVESIVHSTWWPNGRKIIKCKVCDLEFRSMAKLREHFFEPCCGKQHSLVNYSIVNQKGFELHLELDSETDDEESAETKNNDRNIKSLLPYDCCMCGRSFKRKYQISQHQRSMHNYEMLELKCERCFYRTVSQKVLDYHRNTQCFNIEKKYKCDQCNFKFMWEENLDNHVAKFHSAKGYEKVMNTLTMEISGPDEVSVNNSQSMSDKNILNLDSCKQSTSTGKKFKKGLLNNCDVPTTSSYLEERVKRNKIKESLKCNSCEITFLSSADQKKHIRTHTLESNFKCDICGKSFTGNRKLTIHKLIHTGERPFHCKICQKSFNNPANLKQHERIHKPENPYKCNVCQKTFKIDSYLKAHRKATGHSDNADLNDTQQPLLKEITLCPICGTALSSKTNLKFHMRIHTGERPYKCDLCEKTCARKFDLDLHKRTHFTDRPFKCTMCEKSFIRPGKLKDHMRMHTGERPFQCTICQKKFNRKLYMQRHLLTHKDVKPFTCEICDRRFTCAAYLKTHCVKQGHFMKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-