Tsol018705.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Thelaira solivaga
Gene Symbol
-
Assembly
GCA_947397855.1
Location
OX377612.1:44665499-44673421[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.19 12 6.8 0.7 1 23 205 228 205 228 0.97
2 22 0.015 0.89 10.4 1.1 2 23 288 309 287 309 0.96
3 22 1.9e-05 0.0011 19.5 1.1 1 23 386 409 386 409 0.97
4 22 0.089 5.4 7.9 1.9 2 23 417 438 416 438 0.97
5 22 0.059 3.6 8.5 0.7 2 20 495 513 494 516 0.92
6 22 7.4e-05 0.0045 17.6 1.9 1 23 595 618 595 618 0.98
7 22 0.028 1.7 9.5 1.9 1 22 626 647 626 647 0.95
8 22 0.043 2.6 8.9 0.6 2 23 659 681 658 681 0.94
9 22 0.015 0.92 10.3 0.8 2 23 705 726 704 726 0.95
10 22 0.034 2.1 9.2 0.2 2 19 753 770 752 772 0.94
11 22 0.00063 0.038 14.7 3.1 1 23 828 851 828 851 0.96
12 22 0.092 5.6 7.8 0.6 1 23 888 911 888 911 0.96
13 22 0.022 1.4 9.8 0.3 2 23 964 984 963 984 0.90
14 22 1.2e-06 7.1e-05 23.3 0.9 1 23 990 1012 990 1012 0.99
15 22 1.9e-05 0.0012 19.4 3.8 1 23 1018 1040 1018 1040 0.98
16 22 2.4e-07 1.5e-05 25.4 1.4 1 23 1046 1068 1046 1068 0.98
17 22 6.3e-06 0.00038 21.0 1.1 1 21 1074 1094 1074 1095 0.96
18 22 0.00015 0.0091 16.6 0.4 3 23 1121 1141 1120 1141 0.98
19 22 1.4e-05 0.00085 19.9 6.1 1 23 1147 1169 1147 1169 0.99
20 22 4.8e-06 0.00029 21.3 0.8 1 23 1175 1197 1175 1197 0.99
21 22 2.6e-05 0.0016 19.0 4.5 1 23 1203 1225 1203 1225 0.98
22 22 0.65 39 5.2 3.2 1 19 1231 1249 1231 1252 0.96

Sequence Information

Coding Sequence
ATGAGCAATAGTGATAAATGTTTTATCAACGGAGTTCAGTACAAATGTCGAACATGCTTTGATCCGGGTGAAATACTTTACTCTCTTGATAATGAATGTAGCGATTCAAAAACTTGGCGTGATTTAATTAATTATGTTGCGGAGTTAAAGACAAATGATGACAAGTTTCTCCCAAATACTGTTTGCTGCAAATGCTTAGATAAAATTATAAATTATTACGATTTTATACTCCATATTAAAAATGTAAATAACAAATATTTGCAACTATTGGCAAAAAGTGATGATTCCGTGCAAGACGGAGTATTAACGGTATTTAACAACTTTACTGACTGCTTGTCTGAATCTACTATTGATTTGCCAATAGCTGAATTTGTATCGGAAATCAAGGTTGAAGAGGAATCGGTAGCTTCATATGATATAGTTCATAACATAAAAGAAGGCGATAGTATAGAAAAAGATACTTATGATCCGTTTCAAGAAACCTGTGATGAGGATTTGAAATTACCATTAAATGAGCTACATGACCAGCAAAGGTGCATAACATTGAAATGTCAAGAATCCGATAACAAATTTACATCAACAAATTTTCACATCGAAAAAGCTAACAGTAGTTTCGTATGTCCCATATGTATGAAGTTATTTACTGCAAAAATAAATTGCCAACGGCATATAAATATAATTCATGGCCAAAAACAAGAATTTATTTGTGGGTTCTGTGGACACCGTTGCCGGTGTAAATATTATATGACGAAGCACCTGAAACGAATGCATCCTGGAGAATCATTAAACACGAATATGAAACAACTTGTTTTACTATATGGATATCGTTTATATAGCAAGCCTGTTCCTTGGCTTTCTGTGGAATGTAAACTGTGTGACACTCTTGTTAGAACAGCGAAAGAACTTCGTCATCACTTGCAAAATCACAGTAATCTTTATACTCTTGAAAGTTTAGAACTTAATAGCAGAATTGTTCAGCACTGGTTTTCGGATATGAATGATTTGAACGTTATCAAGGATAAAATATGCAAAGACATTATTAAACATGATTGGTTCAAGTATTATACAGTATTAAACGAATATTCCTTTGAAATGTCTGTTAGTGATACAGAGGCAGAAGATTTAGAGGATGAACCTATAGATCGTATAGGCAAATACAAATGCGAATTATGTGGCAAAGAGTTTTCATATAAATACAAAGTTTTTGCTCATATGAAAGAAGAGCATATTAAGGACGATATTGCTTTGAAATGCAAACGTTGTAAATTAGAATTTGTGTCCATAAAGATGTACGAAAATCATAAACAAACTCATTGCCGAAATAAATATAAAAATTGTCATTGTTCTTATTGCCCGGGCAAATTTGTTAACACCGAAAATAAGAATAATCATAATTGTATACAGAGTATATCAGATAACTCCAAAATTCTACAAAATTTAGTGACAGCCAATGATAAATTATTAGTATCAACAACTTTTATTCGATGTTGTCTTTGCGAAATGGTATTTGAAAAGCTTCGAGATTTACGCCAACATATGCCAGTACATGAAGATGGTAAAACTGGAATTGACTTTAAAAATTGTATATATAAAAAACAATTTTGGGACTCTGATTCAATTGACTTTGGAATGCTGCAGCAACAAATAAAAGAGGCATTTATTACACGCCAAATTAGTTATTTTTATCAAGCCATCGATAAGCATGGCAATGAAATGGATATTTCAGATTCGGATTCGGATAGCTCTACAGAGAATGTTGTTACTAAAAATGGAAGAAAGACTTACAAGTGTGACCTTTGTAAAGAAATATTCAGAAGACGAAAACTTTTATTAAATCATCAACAAAAGCTGCATTCTGAAAATGATCAAATGCCATACACATGCGAGCACTGCAGTCAGCAATATATTAGCATCCATTTGTTGCAACAGCACTTGAAAAGGGAATGTTTAAATGAACAACGGCGAATAGCTACAAAGTGCGATCAATGTAATGCACGTTTTATATGGAACAGTAATTTGTTAAAACATAAAGAAATTCAGCATCAACGCTCTGTAGCAGATATTTCCACAAGTGTAAAACTACAACGTCCTTACAAAGAGGTGCAACTTCTTTACTGTTTCTTATGCCCGCAAACATTTTTTAGTACGGAATACCTAAACGTACACTTATATCGCCATCAGCTGAGTACATCCGCTATTAAAACAATTGAAAGTATAGTGCATTCCACATGGTGGCCAAATGGTAGAAAAATAATAAAATGCAAAGTATGTGATCTTGAATTTAGTAGCATGGCCAAATTGAGAGAACATTTTTCTTGCAAGGACATTGAACTTTGCTGTGGTAGGCAACATTCGCAGGTTAATTACTCGATTATTAATCGAAAAGGTTTTGAGCTACATTTAGAACTGGATTCTGAAACCGAAGATGACGACAATGCAGAAGCTAAAAATAATGAAGGAAATATAAAGTCTTTACTTCCATATGATTGTTGCATATGCAGTAGGTCGTTTAAGAGGAAATATCAAATTGCTCAGCATCAACGGGCTATGCACGATTATGAAATGTTGGATCTCAAATGCGAACGTTGTTTCTATAGGACTGTCTCACAGaaagtcttggattatcatagaagtacccaatgttttaatattgaaaagaaatacagctgtgatcagtgtaattttaaattcatgtggcaagagaatctagataatcatatctcagtatttcatactgcaaaatgtttcgaaaaagttacggatgccataaatgtggaaacttttaatgagtcagaaagtataaacagtatagattcacaatcaatgctgaataacaactcgtatggttacattcagtccacatcaaaaataacaaaagataaaaaagtttcatgtaagatttgcggagtattcactaccaccgcaaatcttagagtgcatttaatgagacacaaaggtgagaaaccgttcaaatgtaatttttgtgaaaaagcattttcagcatcatccgatctaaaggaacacatacgtacgcacactggagaacgtcccttcaaatgtgatatatgcgataaatcatttaggcgaaattgcaaattaactattcataaactcatacacactggcgaacggccttttcaatgtaaaatttgtaacaaatcattcattaatccagactatttaaaacttcatcagcgcaatcatggtcctgaaaacccctacaggtgcaacatttgtcaaaaaagtttcattactagcgcatatctaaaaaaacatcggaaacttgagttatgttcaatgcctggggaaggaagcaacgctagtagctccaaagagcacttatcaaaagagagaaatttatgtccaatgtgtggtgtctctttatccagtaagacaagtctcacatatcatatgaggtaccatacgggtgaaaaaccctaccaatgtgatctttgtgaaagggcttgtaccacaaaagatcatttacgtcgtcatagacgtacgcactttactgatcgtccttttaagtgttcgtcctgcgaaaaatcgtttgtcactcagaccttgttaaaagctcacgtacgaatccacactggtgaacgaccctatcaatgcacgatttgcaaaaaaaaattcgtgagacagtgtaatttgaaactacatttgcttaatcacaaaggtgaaaaacccttcaggtgtgaggtttgtgatcgaggatttatatgtagagcatatctcaaaaaacattgCGCCAAACAGGGACATTTCGTAAAAAATAATTGA
Protein Sequence
MSNSDKCFINGVQYKCRTCFDPGEILYSLDNECSDSKTWRDLINYVAELKTNDDKFLPNTVCCKCLDKIINYYDFILHIKNVNNKYLQLLAKSDDSVQDGVLTVFNNFTDCLSESTIDLPIAEFVSEIKVEEESVASYDIVHNIKEGDSIEKDTYDPFQETCDEDLKLPLNELHDQQRCITLKCQESDNKFTSTNFHIEKANSSFVCPICMKLFTAKINCQRHINIIHGQKQEFICGFCGHRCRCKYYMTKHLKRMHPGESLNTNMKQLVLLYGYRLYSKPVPWLSVECKLCDTLVRTAKELRHHLQNHSNLYTLESLELNSRIVQHWFSDMNDLNVIKDKICKDIIKHDWFKYYTVLNEYSFEMSVSDTEAEDLEDEPIDRIGKYKCELCGKEFSYKYKVFAHMKEEHIKDDIALKCKRCKLEFVSIKMYENHKQTHCRNKYKNCHCSYCPGKFVNTENKNNHNCIQSISDNSKILQNLVTANDKLLVSTTFIRCCLCEMVFEKLRDLRQHMPVHEDGKTGIDFKNCIYKKQFWDSDSIDFGMLQQQIKEAFITRQISYFYQAIDKHGNEMDISDSDSDSSTENVVTKNGRKTYKCDLCKEIFRRRKLLLNHQQKLHSENDQMPYTCEHCSQQYISIHLLQQHLKRECLNEQRRIATKCDQCNARFIWNSNLLKHKEIQHQRSVADISTSVKLQRPYKEVQLLYCFLCPQTFFSTEYLNVHLYRHQLSTSAIKTIESIVHSTWWPNGRKIIKCKVCDLEFSSMAKLREHFSCKDIELCCGRQHSQVNYSIINRKGFELHLELDSETEDDDNAEAKNNEGNIKSLLPYDCCICSRSFKRKYQIAQHQRAMHDYEMLDLKCERCFYRTVSQKVLDYHRSTQCFNIEKKYSCDQCNFKFMWQENLDNHISVFHTAKCFEKVTDAINVETFNESESINSIDSQSMLNNNSYGYIQSTSKITKDKKVSCKICGVFTTTANLRVHLMRHKGEKPFKCNFCEKAFSASSDLKEHIRTHTGERPFKCDICDKSFRRNCKLTIHKLIHTGERPFQCKICNKSFINPDYLKLHQRNHGPENPYRCNICQKSFITSAYLKKHRKLELCSMPGEGSNASSSKEHLSKERNLCPMCGVSLSSKTSLTYHMRYHTGEKPYQCDLCERACTTKDHLRRHRRTHFTDRPFKCSSCEKSFVTQTLLKAHVRIHTGERPYQCTICKKKFVRQCNLKLHLLNHKGEKPFRCEVCDRGFICRAYLKKHCAKQGHFVKNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-