Tsol003527.1
Basic Information
- Insect
- Thelaira solivaga
- Gene Symbol
- lola
- Assembly
- GCA_947397855.1
- Location
- OX377614.1:66582091-66584372[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-12 1.3e-08 34.6 0.0 1 45 419 463 419 463 0.94 2 2 1.6 2.8e+03 -1.6 0.2 4 20 557 572 556 573 0.87
Sequence Information
- Coding Sequence
- ATGGGTGGCCCAGCGGCGCCTACCTCCTCAAATGGTCCCCCTGAGGGTCAAACGTATTGCTTGCGCTGGAATAATCACAAATCGAATCTGGTAGAAATATTGGATTCACTTATTAAAGTTGAAAGTTACGTTGACTGCACCATAGTGGTAGATGATCAAGTGCAATTCAAGGCGCATCGCGTGGTTTTGGCTGCCAATTCACCATACTTTCAATCAATTTTACAGGATTTACCCATGGATCATTGTAGTATTATATTTCCGGGTGTTAAGGCGTTTGAGATGCGTGCTTTATTAGAATACATGTACACGGGTGAGGTAAATGTTACCCAAAGTCAAATACCCAAAATAATGCGCATAGCTGAAGAGCTAGAGGTGAAGGGTCTGTTCGATATGGCCGATTTAAAAGAGAAATTCAATAAATTAAGTGAAGAGCATGCTGAAAGATCGGCCAGTAATCCATATGCCAGCAGCACAGCACCCTCGAATCCTTATTCCTCTGTCAGTACCACATCCTCACCACCAGCAGCCATAACTAGCCAGAAACCCAGTCCTAAGGATGCTGGCGATAATTATCGTAATAATTCCTCTTATGTGATTTCTACCTCAACAAATATCTCACCTTCAGCTGCTCCCACCAGCAGCTCTTCACCACCCTACAACAATTATAAATCACCCTATTCCAGTTTATATGCAAAATCTCCCGGTCCCCCAGCAGTTCCATCTCCCACGATTCAACCAGGTAACTGTCAACAAGCTGTCAGCAATTTAACACCCACTAGTGAACGTACTGCTCAATGGCCCATGTCACCTTCCGCAGCAGCCGCAGCTGTTATGTTGAGTTCTGTTTATGAGTCGGCTCCTGATATGAATCCCCTCAAAAGAAAAAAGCTCTCCTCCATGTCGAGTATGTTAATGAATCGCGATACGCCCATATTGCGCAACGTTTTAGCTCAAACAAATCCTGCAGATTCCTCACAGCAGTTGCCTCTGTTGTTGCCTAATGCCGTGGGCAATATTAAGTCGGACAAATCTTCACATGCAGAAAAAAATTTGAGTGGTAACAACAACAACAACAACCCGAGTTTTAATGGTTCAGATTACAGTGACAAGAAATACCTTGATGAGCCACATTCCCCCTATACTGATCGCTCTTTTGAAGATGATGGTTTTGATCCCAAGGGCGCCAGCAGTTTTGGTGGGAGTTTTAGCAGCAGTGCCAATCAAAAACCTGAATGGAAACGTTACAAACAATATACCCGCACTGATATCATGTCGGCCATACAATGTGTGCGTGATGGCATGAGCGCTTTGCAGGCTTCTAGAAAATTCGGTGTGCCTTCTCGTACTTTGTATGATAAAGTCAAGAAGCTGGGCATTACTACCGGTCGTCCCATGAATCGCACCCTAAAACGCAGCCCTAGCAATGTAGAAACATCGGCTGCCTTTCCTTATGCCCATGGTTATGGTGCAGCTGCCGCTGCTGCTGCTCTACCCGAAGCTGCTACTCGTGAGGAACGTGAATTTAAAGAACATCATGCAAATGATCATCATCACTTGCCACCCAACCTTTCACATCCTTTACTGGAGCATCATGCTTTTCTGCAACAGGCTTTGGAAAATCATGGTAGCGGAGATATGGCTAGACCTGAGGCATTGCATGCAATTCACGCTTTAGCAGCAGCTGCTCATGCAGCTGCCAATCGTATGTCAACTAGCCCGGGTGCCAATGGCAATGCTGGGCGTACACCTAGTCCTACAAATTTCTCTTTGAAATATGGTAATTTACGCAATGCTgagcaagagcttatggaacgacatgaaatggaacgagaacgagaacgcgagagagaacgggaatatgcggaaagggaaagagagcgtgaacgcgaacaggaacgtgattttgaaagggaacgtgagcgtgaacgtgatgaagatgaTAATCATGTTGAAGATTTATCAATTACACGCAAAGAAAGCATTCATTCCAGTTTAGAGGGCAGAGAAAGACCTGAATCTCCCTACTCACCGGACGTGCCAGTCAATGATGATTATGAGAAACCTGTTATTATGAACACTAAAATACCTACAAATGCCAGTCATGATCCATTCATTGGTGAAGCCAATATGAAACGTGAGGTTGTAATAGATGACATCAGAGCCGATTGA
- Protein Sequence
- MGGPAAPTSSNGPPEGQTYCLRWNNHKSNLVEILDSLIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDLPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFNKLSEEHAERSASNPYASSTAPSNPYSSVSTTSSPPAAITSQKPSPKDAGDNYRNNSSYVISTSTNISPSAAPTSSSSPPYNNYKSPYSSLYAKSPGPPAVPSPTIQPGNCQQAVSNLTPTSERTAQWPMSPSAAAAAVMLSSVYESAPDMNPLKRKKLSSMSSMLMNRDTPILRNVLAQTNPADSSQQLPLLLPNAVGNIKSDKSSHAEKNLSGNNNNNNPSFNGSDYSDKKYLDEPHSPYTDRSFEDDGFDPKGASSFGGSFSSSANQKPEWKRYKQYTRTDIMSAIQCVRDGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTLKRSPSNVETSAAFPYAHGYGAAAAAAALPEAATREEREFKEHHANDHHHLPPNLSHPLLEHHAFLQQALENHGSGDMARPEALHAIHALAAAAHAAANRMSTSPGANGNAGRTPSPTNFSLKYGNLRNAEQELMERHEMEREREREREREYAEREREREREQERDFERERERERDEDDNHVEDLSITRKESIHSSLEGRERPESPYSPDVPVNDDYEKPVIMNTKIPTNASHDPFIGEANMKREVVIDDIRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00258994;
- 90% Identity
- iTF_01427568;
- 80% Identity
- iTF_01427568;