Tsol008974.1
Basic Information
- Insect
- Thelaira solivaga
- Gene Symbol
- ttk_1
- Assembly
- GCA_947397855.1
- Location
- OX377613.1:56500198-56505298[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-19 5e-16 58.4 0.0 2 45 563 607 562 607 0.97 2 2 4.6 8e+03 -3.1 0.7 3 11 640 648 640 651 0.82
Sequence Information
- Coding Sequence
- ATGTCAGTGCaacaattctgtttacgctggaataatcatcaaccaaattttatatcagtctgctcttctctactgcataatggcacgctggtagatgttacactggctgcagaggggaggcagttgcaggcccataaaattgtattatcagcatgtagttcatattttcagacactgtttacaacaaatccatgccaacatccgattgttatactaaaagatgtgcagtatgacgatcttaaaacaatggttgactttatgtactatggagaggtgaatgtatcacaagagcaactgcctcatatactcaagacggcagaaatgcttaaaattaaaggtctcgcagaaatgcCCACTGACCCTGCCAATTTAACAAAATCTGATAGCAAATCATCAAATGATGGTACAGAGTTGGTGGGAAGTGGAGGCAATAATGGACAATTaggaggtggcaatggtggtagcagtggtggtagcgttggtaattcgagtagtggtggtatgggtaacagtaccggcagtggcaatgtaaacgattcaatatggggtagtaacgaatcacaatatcaacaacaacaacaacaacaacaacagcaacaacaacagcaacatcaaacacatcatcaacaattgcaacagcaacaacatcatcatcagcaacaacagcagcaacagcaattacacactcaattgcaaaacagtcaaacgcaaacctcacagcaacagcagcagcaacaacatcatcagcaacaactacgacgcacaccttctccattaggcactggTGCCTCACCAGCCACCAGACGAAAACGATTGAGGAAATCTTCGAATAATGGATCTGGTGAACGAACTAACTCCGAAGATCATAATACATCTTTGGATGCCGCCACAGCTGGTGGTCTTACCTTGTCCCAAATGAGTCAAATGTCATTTAGTGGGGGTCCTGCAAATAGTGCTCTAAGTGGTTTAGCTGCACATTCTTTACACACAGCTAAATTACTTAAAGAAACATCTAATAATGACTTGGAAACAAATCCTCAAGATTCAGACAGCTTAGATGATACACATGGACATGTACATATGCAAATTAAGCCGGAAGTCGATATGAGCGGAGTACCACAGACTATGCCACTGGATATATCAGGACCCACAACGCCATCAGAGCATGATGCCCCCAATTCACAATCTGCACATTCAGGTTTACAATGGACGGTTGTTGAACCAAATTATTCACGCTTTTCGCTGTCATCatgtcccaccaatttaattggcaataacaacaatcaaaacacaaacaccaacaataacaacagttcaagtagcgatcagcaacagcatcgccagcaacaggaagctgttgcaaatcaacaacagcaacaacaacagcaacaacatttacagcaattacaatatcaacaccagcagaattctgcatattcaccacaaattataacggtcagtggttataacaatgcaacagcagcagcagtagcagccgcccaaaatttgtcaccgcCTTCTCCTAGCGATGGTAATATGGTTCAAACAGTGTACAGCCAAGGGCCAACCCCCACCCAATCACCTGTGGGCAACGCCTCAAGTTTAGGCGGTGGCAGCAATATGTCTGGCGGTAATTCGGCAAATAACGCCAATATAAAGCGTAAGCGGTCGGTTAATCCACAAGGCGATGAAAATTTTATACGGGCTTTGGAGGCAGTACGTTCAGGAGGTATTGGTTTCTGTAAAGCGGCCCGATTGTATGGCGTAAACAATCGTACATTATGGTTAGAGTATAAAAAACGGGGTTATCCTGTGTCCAGGCCCAGTATAAAATCACGGGTGGTCAAACAAGAACCGAATCTCTCCCCCTCCCCGACACCACCTGCTACCGCCGCAGACGATACGAATGAGAACTATGACCATATGGCAGCGGCTGTGGCAGCTGCACAAACAGCTGCTCTCAATATGCAAATACCACCGACTTCTGACACACCGACGCCTTCGTTGATGTGTACACCTCATCATACTGGTACAGCCACTGGTGCTACTACACATCCTACAATGGGCGTTATGAGTTTCTTGGATACCCGCCACATGGATTTCCCAGCCAGTCTGCATTCAATGTCACGGCAGCGTTATATTGATGCTGGTGCTGGCAGTGGTGCAGGAGCGGGTACAATTAATGTTAATCCGGCAGCAGCAATGAACTTGCAGAGTATTAATTTTAACTCAATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSNDGTELVGSGGNNGQLGGGNGGSSGGSVGNSSSGGMGNSTGSGNVNDSIWGSNESQYQQQQQQQQQQQQQQHQTHHQQLQQQQHHHQQQQQQQQLHTQLQNSQTQTSQQQQQQQHHQQQLRRTPSPLGTGASPATRRKRLRKSSNNGSGERTNSEDHNTSLDAATAGGLTLSQMSQMSFSGGPANSALSGLAAHSLHTAKLLKETSNNDLETNPQDSDSLDDTHGHVHMQIKPEVDMSGVPQTMPLDISGPTTPSEHDAPNSQSAHSGLQWTVVEPNYSRFSLSSCPTNLIGNNNNQNTNTNNNNSSSSDQQQHRQQQEAVANQQQQQQQQQHLQQLQYQHQQNSAYSPQIITVSGYNNATAAAVAAAQNLSPPSPSDGNMVQTVYSQGPTPTQSPVGNASSLGGGSNMSGGNSANNANIKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKSRVVKQEPNLSPSPTPPATAADDTNENYDHMAAAVAAAQTAALNMQIPPTSDTPTPSLMCTPHHTGTATGATTHPTMGVMSFLDTRHMDFPASLHSMSRQRYIDAGAGSGAGAGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01397556;
- 90% Identity
- iTF_01236810;
- 80% Identity
- iTF_01427558;