Tsol008970.1
Basic Information
- Insect
- Thelaira solivaga
- Gene Symbol
- -
- Assembly
- GCA_947397855.1
- Location
- OX377613.1:56486110-56487960[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.2e-09 1.6e-05 24.7 0.0 8 40 396 428 394 429 0.88 2 4 2.8e-14 4.9e-11 42.4 0.0 5 44 447 486 444 487 0.93 3 4 0.014 24 5.0 0.0 27 38 516 527 512 533 0.88 4 4 8.6e-14 1.5e-10 40.8 0.0 5 41 556 592 555 594 0.92
Sequence Information
- Coding Sequence
- ATGAATCACTTAAAGTGGATGGGCCATTCGGCCACAATTTTAGATATACATAAAAACTTAAGAGACGATTTAAATAGCTGTGAAGTTACATTGGTGGCCAAGGGGCACTGCGTTAAAGCCCATCGATTCGTTTTATCTTCATGTAGTGACTTGCTTCGTTGTCTTTTAACAGACATTCCGAATGGACAAGAATGTTGTGTTATGATTCCGGATATAAAAGGTCATTTGCTTGACAATGTTTTAGCTTTTATTTATTTAGGAGAATGTTCTTTATCTTCTACAAATTTGTCCGAGTTCTTGGAAGCTATTAATGTGTTGGGTATTAAAAGTGCCATAAGTTTTGAGTGTAATACGAATGCTTTACAGTCAGCCCAAAGTACTAGTCATAGTACCATAGCTCTAGATAGCAATACAACCATGGCGCCAATAAATAATGCACTGGAAAACACACAAGTAACAGTTGGAGTTTCTAGTGATTCGTTGCATCAAGAAGAAATCATAGAAGCACAAAACGTAATGCATAATGAATCACATACCGCACCTGCGAATGTTGTAAACAATTCTGGTGCAACTAGAGAACTAGACTTTTTGGATGTGTACCACGAACCTCAGCACAAAATTACATATTCAATAGAACATGTCCCTGGATCCACAGCGGGTAATGAATTCATCTTAACTGATAACACAGGCACTTTTACACTAACACACAGTGGTAAATTGGAGCCTAATACATCGCCTGCGGAATCCTCTAATTTAGAAGTAACTGAAGATGATAATTGTGATTCACATATAATAGAGGGATATAGTAGTAGCGATGAACCGCTAATTCAAATAGGTGAGGCAGGACAAGAACAACAAAGTATAACTGTTACGCAATGTTCAACACAACACCAACAGCAAACATCATTGGCTTCAGTAGCAACTACTGCGACCTCAATTATACAAGTCAAATCAAAATTAAAAACTCTGAAGCCTAAAAACACACAGGGAACACAAAGAATAATAGCTAAAATAGAGCAAATTTCAGAGGATTCAGGTGGCGATGATCCTATATCGATACTGCAAACACCAAACGAAAGTTTTACTTTACTTAAAGATGCGTCCATAATGGCTGCAGGAAATACTACTCATGATGAATCAACAGACTTTCCTGCAAATACCTCAGGCTCATCTGCAGCCGAATTAGCGTATCAAGCTATGGTAAACGAAGGTATGTCATTACCAAAGGCTGCTAACAAATTTAATGTATCGAAAGCACAATTGTGGCGAAGAGTAAGAGGTTCTGGAGTTGAACCGGTTAATAAATCAGTCAAATTGGATCCTGATAAAATTGATGTCATAGAATTAGCAAGTAAGGCTGTAATTAACGAGGGTTTGTCACTACAAAAGGCTGCAATACGATATGACATTTCTAAAACGGTGCTTTGGCGCAGGGTGCGCAAACATCCACAATATATGAAGACAGCTAGAGAAAATCCGATTATAACAAAGGCATATGAGCGATTGAAATCTGGTGAATCTCTCAAAAGCATATCACAGGATTTGGATATACCAATGTCAACTTTACACCGGCATAAAGTGCGTCTGTCACAAACTGGTCAATTACCTGAATTTGTCACATGCAAAAAACGTGATAGCATGTCTAAAGATGATCTTAAAATAAAGCTTTCCAAAGCAGTTTACGCTTGCGTACACGAAGGTATGTCACAAAATCATGCTGCCAATTTATTTCAAATTTCTAAGAGCACTTTGTGGCGACATCTACAAAAACGTGTCGCTGAAGCGGAGGCAGCCGAAACCGAGTCAATGGGTGACGAGGATGAAATTAAACAAGAAGTTATTCTTTCCTAA
- Protein Sequence
- MNHLKWMGHSATILDIHKNLRDDLNSCEVTLVAKGHCVKAHRFVLSSCSDLLRCLLTDIPNGQECCVMIPDIKGHLLDNVLAFIYLGECSLSSTNLSEFLEAINVLGIKSAISFECNTNALQSAQSTSHSTIALDSNTTMAPINNALENTQVTVGVSSDSLHQEEIIEAQNVMHNESHTAPANVVNNSGATRELDFLDVYHEPQHKITYSIEHVPGSTAGNEFILTDNTGTFTLTHSGKLEPNTSPAESSNLEVTEDDNCDSHIIEGYSSSDEPLIQIGEAGQEQQSITVTQCSTQHQQQTSLASVATTATSIIQVKSKLKTLKPKNTQGTQRIIAKIEQISEDSGGDDPISILQTPNESFTLLKDASIMAAGNTTHDESTDFPANTSGSSAAELAYQAMVNEGMSLPKAANKFNVSKAQLWRRVRGSGVEPVNKSVKLDPDKIDVIELASKAVINEGLSLQKAAIRYDISKTVLWRRVRKHPQYMKTARENPIITKAYERLKSGESLKSISQDLDIPMSTLHRHKVRLSQTGQLPEFVTCKKRDSMSKDDLKIKLSKAVYACVHEGMSQNHAANLFQISKSTLWRHLQKRVAEAEAAETESMGDEDEIKQEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00199788;
- 90% Identity
- iTF_01427594;
- 80% Identity
- iTF_01427594;