Tsol000681.1
Basic Information
- Insect
- Thelaira solivaga
- Gene Symbol
- retn
- Assembly
- GCA_947397855.1
- Location
- OX377614.1:2799559-2817171[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-20 2e-16 60.4 0.0 16 89 21 92 13 92 0.93 2 2 4.1 1.1e+04 -2.9 0.0 44 61 121 138 118 157 0.63
Sequence Information
- Coding Sequence
- ATGGCTAAGAATAATAGGGACGGTGCAAATATGGACCATAATGACAATAAGAATAATATGAAAGGCTCACCAATTAATCGTTTGCCAATCATGGCTAAGTCAGTGCTGGATCTGTACGAATTGTACAACTTAGTAATTGCTCGGGGAGGTCTCGTTGATGTCATTAACAAAAAGCTGTGGCAAGAAATAATTAAAGGTCTCCATTTGCCATCCAGTATAACAAGTGCAGCATTTACATTACGAACGCAATATATGAAGTACTTGTACCCATATGAGTGTGAAAAGAGAAACTTGAGTACCCCAGCGGAATTACAAGCGGCAATTGATGGCAATCGTCGTGAAGGCCGACGTTCCAGTTATGGCCAATATGAGGCAATGCACAATCAAATGCAAATGCCCCAAATTGCTCATCAAAGTCTTCCGGGTAATATACAACAAATGTCTCCTTTAGCTTTGGTTACACATGCAGCAAACAAGCAGCAAGTACAAGCGGCAGCTGTAGCTGCCGCTGCACATCAGAGACTGATTGCACCTTCATTTGGCCAGGTGCCAAATTTGGTAACACAGGAATTTGAACAGCGTATGATTGAGTATTTGAAATTGATTCAAGTGAAAAAAGAACAAAATTCTATGAGTAATAGTTCGGGTCCTATGAATTTTTCACCTCAACACCAACAGCAGCTTCTACAACAAAAACGTCATAGAACGCAAAATCCTGAGATAAGCACAAGAGATGCTATAAATGCACTTGAAATGTCACGTGTCGCATTGTGGCAAATTTACCATAATAACACCAGCCCCACACCAGCTTCTGTAAATACTTCCCCGCATGGTGGTGAGCAATTAGATTGTATTGGAAATCAAGATGATAATAAAGTACAATTtcatgatgcgttatCCTTTCCTGATTCACGACAAAATTTCAATGACATTAAAAGTGAGCAAGAATTAGATCCCAACTCGGAAAATACTGATCATAATGATTTTCAGCAGCATCCTCCTCCAATTAAGCGTTCTCGATTTCCTGAGAATTTTTATTTACCTCCAGGAATGAGCAACCATGCTGCCCCTGAAACGAACTACAAAGGCGATCATCATGATTCCGAAGCTGATCTTGAAGAAGAAAACGATAATAGCGAAGAAAATGTTTCAGAAAACCCTTTACATGATGATAGACATAGTTCAAAAGGTACTTCGGTTCAGCATCATGACTGCAATGGTAGTATGAATGATAAGTCAGATGATTCTGCAATTGAAAGCTCGCCCTCGACCTCAACAGCACTAGTCAGTAGTGCTATAATTTCTCCTCTACTTACAAAAACAAAACAGACGCAACCCTCATCAGACGTAAATAATACTGCTGAAAATTGCGCAGCAAATCTGACCATGGAAAACTTTAAATCACTACGTTTTATGGAGGCATTAAACCTTCTTTCTGGATTACAATTTCGTATAATGCGAATAGCTACCAAATCTAATGGTGAACAAGAGTTAACCGTTGAACTAGAGTTAAGTGGAAATAATTACTCTGGTGTGCTCATTTCCAAGACATCGAATCTTGTGTCGACAGGAGCAACGACGGCGGTGACAACAGTCTCCACCATAGGTAACAAAAGTATAAAACATTTGCACCATACTGGGGGCAATATTACAAACTGCAGCCAAAAAACAGACCAGCTCAACCACATATCCTCTAATATTAGTACTAACAGTAAGAAAACCAGCAATGATTTAGACATTGCTTTAGATGCAGTCGTAGATATAAGTGAACAACAAAGGCACGAAGCTGAAAAACCATCAAATACAACTTCATCAACGGCAGTGACTACAAATTCTGTCATTGTAAATAGTCCCAACAGTAGCACAACCGAACTTGAGGATGCGCCATAG
- Protein Sequence
- MAKNNRDGANMDHNDNKNNMKGSPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMQMPQIAHQSLPGNIQQMSPLALVTHAANKQQVQAAAVAAAAHQRLIAPSFGQVPNLVTQEFEQRMIEYLKLIQVKKEQNSMSNSSGPMNFSPQHQQQLLQQKRHRTQNPEISTRDAINALEMSRVALWQIYHNNTSPTPASVNTSPHGGEQLDCIGNQDDNKVQFHDALSFPDSRQNFNDIKSEQELDPNSENTDHNDFQQHPPPIKRSRFPENFYLPPGMSNHAAPETNYKGDHHDSEADLEEENDNSEENVSENPLHDDRHSSKGTSVQHHDCNGSMNDKSDDSAIESSPSTSTALVSSAIISPLLTKTKQTQPSSDVNNTAENCAANLTMENFKSLRFMEALNLLSGLQFRIMRIATKSNGEQELTVELELSGNNYSGVLISKTSNLVSTGATTAVTTVSTIGNKSIKHLHHTGGNITNCSQKTDQLNHISSNISTNSKKTSNDLDIALDAVVDISEQQRHEAEKPSNTTSSTAVTTNSVIVNSPNSSTTELEDAP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -