Basic Information

Gene Symbol
JARID2
Assembly
GCA_947397855.1
Location
OX377613.1:65369648-65378901[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-22 1e-18 67.7 0.0 6 89 1917 1998 1912 1998 0.92

Sequence Information

Coding Sequence
ATGGTAGTCTCAAAAGACTCCAAGCGTAAACGTAAGGAGTCGTCTCCGCCGTCGACACCACAGCAACAATCATCTACTGCAGTGGAGTCATCACCAGAAATGCCCAAAAGGACAAAGGTTCAAGCTCAACGCAAGTTTGCCCAGGGCCAAAGTGCACCACAACCATCTTATGGTTCTATAATAGCAGCATCCTCCTCCTCAAATACTGGACCAAGTACTTCATCAGAGAGTCGTGAACCACCTACAGAAATTTTGCCTAATAAAAGGCCAAAGACGGAAGATTTTCTAACATTTCTGTGTTTTCGTGGTACTTCAGCTCTACCACCACATTTAGATTTTCTTAATCAGGGTAAAAGCAAAGAGCCTGAAAGGCCAGCAAAGAAGCCAATTGTAAAAGCAGTGGCTAAAAAGAAAGGAAAAAAGGGCCGACCGCCAAAAAATGCGAAACAAAAGGAAGAAGCTATGTCTGCCAAAGAAGAAAGTGAAGGTAATAAAGAAATTGTAGCATCAGAAGAGAACAAAAAAAATGCAAGTAAAATAGGAGAAAACAATAAAAATTCGGAAAAAGTGCAAGCTAACAACGAAGAAAAAGAGGAGAAGGAAGAAGAAGATGAAGACTTACCTACTTTTGCTGTGCGCAAAAGGGCAGAAGTTGTAGCTGACGGTAATCGCCGCAGTAATCGTAGTAACATAGACGAAAAGTGCAATAATTCTACAGAAACTACAAAAAGGCGATCGAATCGTGGATGTATTAAAGGATCAAAAGCTACGCTTGATCATCTATCTGAAGAAGAAGATGATGCATATTTGTCAACAGTCGATGATAATAGCAAAGCGGTTAACTCTGATATGGACGGCAAAGAGCGAAAGGCAAAAACACCAGTAAATTCTGAACGGAAGTCTGAAACTCCATCAAAAGAAAGTGAAACTACAGGAAAATCTCGAAAAGGCAGACCTCCTTCAACCAACAAGAAAAAAGCAGTTGAAAGCGCTAAAGATAATGACAAAGAAGAATCTGTTAAATCAGACATAAAGGAAAAGGGTCCCGTTAAACGTCCAAGACAAAAAGAGTCCCCTATTTTTATACCTTCTCCAGAGCCATCGGGCCGGATGACGAGACAAAGAGCATTTTTTGAACCTGTTAAGGTACCTAACAGAAATAACGATGATACTGAAGATGAGATTAAAAAATCTGGTACTGAAGAAATAGATAGAGAAACCAAATGCAAGCACATAGAACCTATTACCAAGCTCAATGAAGCTATAAAGGTTAAAGGTGATGACAAAATCACAGCTAATGAGGCAGTTGTCAATGAAGATAAAAACAAACAAACCCAGTTGGATGTTTTTGATTTTTCATCTGATGATGAACAGCCCTTAGCTAAAACAATAAAATTAAAAAAGACTGGGTCTAGTAAATCAAGTCCCAAGAAAAATTCTCGAGGAAAAAAGAACTCACCCAAAAAGGAAAATATTGACGAAGCTAATAAAATAAATGAAAAAGAATGCACTAAATCGGAACCAATGGAAAGTATTAAGAAAGTAGCAGCAGATTTAAATGTTTTAACGCCAGAAATTGATGAAGATTCTTCAAAAATAAAAAGTAAACGTCCAAGTGTTCCAACTGCAAAAAATTCAAAGAGAAAAGAACACGATGAAAGCTTCAATGAGACCGATAGAGAATCAACTTTGCATTCACCGAAAAAAACGTCAAACGCAAGACAATCTCGCAAAAAAACCAAAGTTGAAAATAAGGATAACACTGCACTTGAAAACGATGCAGAAGACAAGCAAAGTGGTCCTACAAAAAACAAAAGGCCATCACGTAAAACAAAGGAAGCAGCCACCATATATATGGGCATTATTGGTCATCGTTTGCAAATGGCAGAAGATGACGATGATGACATATCTTTAAGTAGCTTTGATCGTCCAAACGTTCGCGAAATGGAAAAAATGGAAAATGAACTAAAACGTAACAGTGCGTCAATAGGGAAAGGATCACCACCGCCAAAGCAATCGAAATCAGTTGAAATGCCACAACCGACTATTGTTCCTACTGTAGCTCCAGTTGCTACAGAAACAAAACCTACAACAGGTCGCCGAGGTCGTCCACCGAAAAATTCTAAAATGCCCCCTGCACCAAAACGTGAGATTGAGGGAATGCTTGTTAAAAAAGGTGTCATTGCAAAATTGTCGCAATCTACTGAAAACTTAGCTGAGGCTAAAGACTCTAAAACAGATCCATCAAAAGCAGGAACCGAGGATGATGAAGATTTTTTGCTCAATGAAGAACTGAACGAAGCAAAACGTAAACTTGAAAAAAGTTTTAGTGATTCTGATGATGAGCCACTTGCAATTAAAGCCCATGTAAAGGGTGGTGACAATGATGCAGATGATTCTCCTAAATCTGTAAGTGGTGTTGATTGTGTGCTTCCATCTATGGCAGCAGTAAATGCTTCTAACACAACCAGCGGAGGGTTAACAAGTCTGTCTATACTACCCATAACCACGAAAGCTTTAACGACAGCCACACAAATACAACCAATCCCACCAACACTACCACCACCACCGCCGACGCAGCAAACAGCCGTAGTAACATGTGTTACAACTCCAGCAGCAACACATCCCCCCATGACTGGCTCAATGGGTAATATACCATCGCCAATAAGTTGTAATATTCAGCCACCAGCTCCAGTGACTGTTACGTCACAATCTCCTTTTAAAAGTATTGAAAAGAAATCCCCAGTTCCAACTTCTAAAATTTTAAATGTGCCTGCTACTTACGGCATTCCACCAGCCTCCCCTACAGGTAATATTACTGCTGGTATAAATACAAATTTTGGAAAATCGCCCTTGTATATACCACAATCTCCAGTCTATCATTCTCCTCATCCATCACATATAAGGCCTTCAGCAAATCTGCAACAATTTCCTGTGCAAACTGCGAAGAATCCCTCGCTTGTGGCACCTCAACCCAATACGATAACCTCTCATTTGACGACTCCTCCATCACAAATGACAACCCAATCGCCAATAAAATATCAAACTCCTCCAACAACATATCCGCCACCAATCGAGGCATATCCGTCGCCAAAAATTAATCCCAATTTTTTAACGCCCAAATTTGATCGCAATACTTTGTCTCGCCCAGGAAATGGTACTGGAAACAATGCTTTTCCATCACCTTCTCCGGTTAAGTTCGATATGTCAGGTTCAAATAGTGGTCTTTTGAAGAACTCTTCACTTTCGGCACCGAATGTGACCATGAGCCCTAAAACTTTGATATCGAGTAATATGAATTTTTTGGGCAATAATCAAGCAGCTTCAACGTCGGTTTCCGGGCAGGTAAGCAATGATCCTCTAAAGGATGAAATTGGCAGTATTCTTGCTGCCAATTTAATGCCAAGCAAAGAAGAATCTGGAAAAATTTTTGGTATCGCAAGTGTTAGCTTGGCGCAAAGTTCGGGTCCTGATAATACGAAATGCACTTTAGGAAAGTGTGGTTCAATTCATAAGCCTGTTCTAGGCCCGGTAGTTCCAACCGAAAGTTACATTGGTGACCAACTGTCCGGTAAAGAGCGTCGTAAAGCCAAAGTAAATATGACTCATGAACAAATACACAAATGGCTTATTGAATGTTCTTCGAATCCGGATGAAATTCAAGACGATCTTGATGATGATTTTGATTCAGATTTGAGACCAAACAACTTTAGTTCAACACCACCACCAACTCGTGATGATAAGGAAAGTACGTCATTTAGTTCGTCTTCCAAAGCCACTCGTGATTTAGGTAAAAGTGAAAGTGCTTGGTCTGCCAAAGGACCTTCACTTAAAGCTACTCCTGTTGTTGCTACAAGTAGCACAATAAATAATAGAAGAGAAGATATCAAACCTATCGAACCTACAAGTCCCCGGCTGGATGAGGAAGTTGAAAAGAATTCTCCCGTCATGAATTTAATGTACGATAAAGTTCTTGCAAATAAACAGTCTCCAGCTCCTGGCAGTGTGGATGAAAAACTTACACAATCTGATAAATCTGAGAAACACAATGAGAAAAAAACTAAAGAAGAAAAACATACAACAAAAGTTGGAGTTTCTGAAACAAAACAAGCGACTGAGAAAGAACTTTCAACGACAAATAAATCTTCTTCAGGTGGAAAACATAACTCAACCTTAAAGTCATCAAATCAAAGGAAAATTTCACCATCTCCTGTTACAACTCCCACTACTTCTATTCATAAACAAGGTCGCAAAAAAACTGCAGTTGAGTTGACGGAAGAGAAACAAATAAATACTAATCAGAAAGAATCTGTAAATCTTCCAGAAGTTGCGGCTACTGCTACTACTAATGCTACATCAAATTCAAATGTTAATCGTACGCCTAAGCGTACGCTGGTCTATCaacaaaaacaaactttaaaacagcaacagcaacaacaacaattgcaacaacagcagcagcttcaaaagcaagataacacagaattgaaaatatctacaacaacaAGTCATAAGCGTTCGACTACAACATATGGAACCGCATTCTCAGTCGATAATGAAAAATCGATTTATTCGTTTGACAAAGACGATACAGAGGATCAGGAAAAAGCAAACAAACCATCTACTTATCGACGACAAAGCAGAAAAGATTCAAATATCGATAGCGGAATCAATACTACACCAATTGCAGTACAGCCTGCACCACCTACGAAACCAAAGCGAAATGCAGCAGCTGTAGCTGAAATTGCTAATAAAGAGTTGGCTGGAGGTAATTCTCAAACCAGTTCAGTATCATTGACTCTAAGTCCATCTGAGAAAACTAAATTGGTTAAAGTGAGCCTTGATTCTGATAAAACAATAAAGGCAACAAAAGGCGGTAAAGGTGGGAAAAAAAATCTGCAGACCGAATCAAAGCCACCACCTGCAAAAGAAGCTGAATCTGATTCAGGAGATGGTCATACATTTTATATACCATTGCAAAGCACTGGGGCTAGTGGTGACGGTGACGGTGGCATCCAAGGAGTAGCTGTAAAATTGGGCCGTGAAGGTCCTGATGGCCCTAATCAAAAAGTTATCATGCATGCCACTCTTGTAACTAAGGCTCAAATGGGATCTAACACCAAGCCACTGCCCGAGAGTATGAACGTCTCTGATATTGTAAAAAATTTAATGTCAAACGATAAGAAAGGATCTGGTGCATCAACGTCTGCAGCTGCTGCAGCAGGTACAAATTCGTGTTCAAACAGTTTGAAAAATGTACCAATTGGAACAGTACAACCACGATTCAAAGGTGATTCAGCTGTCCCGGGTCCATCCACGTCTTGCGCTGGTGGTGCTTTACAACGTGTCAACTCCAATTCATCTTTATTTTCGGGTTCAGTAAAATCGCGTAATGCGGTTGCTGCTGCAAATACTTCAGGAGGCGGAATGGCAGGTGGTCATAGCTCAAATAAAAAGTTTAAAGACGATACACCCATCAAAATGTCAAACAACACAGCTTTTCCTCGTCATGATGACCCAACACAAATGGTTGAAGCTCCCATATTTCGACCTTCTGAAAAAGAGTTTTCAGATCCTATAGAATTTATAGAACGTATAACGCCAATTGCTGCCAGATTTGGCATTTGTAAAATTATACCCCCTGCTTCCTTTAAACCCGAATGTCGTATATCTGATGAAATGCGTTTTACTGCTTATAATCAATATGTCCACAAATTGTTGCACCGCTGGGGTCCTAGTGCAAAAGAGCTAAGTGCTATTAAAAAGTACTTGGCTACTCAAAGTATCGTGATGAATCATCCACCTTGGATAGGTGGCATGGAAGTAGATTTACCACGTCTCTATCATACAGTCCAAGAGCTGGGCGGATTAAAAGAAGTAATTGAGAAAAAGAAATGGGCTCGCGTTGCTGAGGAGATGTGCATTCCGAAATTGGCACAGGATCGTGTGACAAAATTAGACGACATTTATTGCAAATACTTGCTTCCATATGACACACTCTCTCCAGTTGAGCGTCAAAAGCTTTTTGATGAGGTTGAAGCGGATTGGGCGAAACGAGAAGCTCGTGCCAGACGCAATGCAGATCGTTTTGTAAACACTGAAAGTGTATCGAATGAAGAAGATGATGTAACTTCAGAAAATGATGAAGAAGAGTCTGAAGAAGAAGTTGATGGTGTGTCTATGGAATGCATTGTAAAGGGTCGCAGTATGCCATTAAGTCAATTCTATCGTATTGCAAGAAATACAATGGCGCTTTGGTTTAAAAATACCGAACCAACTGTGAATGAAGTTGAGGCAGAGTTTTGGCGCCATGTTGCCGTACGTGATAGTCATGTTTGTGTACATTCCGGTTCCATAGATTCTTCGGGTTGGGGCTTCGGCTTTCCAAGTCCTGGACCTAAAGGCAAAGGATCCAATTATGCGAGACATCCGTGGAATTTGAAAGTTTTAACAAACAACACTGGATCTGTGTTACGTTCATTGGGACCTGTCATGGGTGTAACAGTACCAACCCTACATGTGGGTATGCTTTTCTCTGCATGTTGTTGGTACCGTGACCCTCACGGCTTATCATGGATCGAATATTTACATACCGGTGCCTCCAAACTGTGGTATGGCATACCAGATGATCAAAGTGCCAATTTTAGGGCTGCTCTGACTTCTCTCATTCCTACACATTGTCAAAATAAAACCATTTGGTTACCCTGTGATACTGTTATGGTACCTCCACATATGCTTACCGATCGGGGCGTATCGTTATGTCGTATTGAGCAGAAGCCTGGAGAATTTATCGTTGTATTTCCTCGAGCTTATACATCAAGTTTAGCTACTGGTTATGTGGTATCAGAAAGTGTTTATTTCGCAACATCGTCATGGTTAGACTTGGCCAAAGATGACTTTAGAGATATCCACGACAGCTGTGAACCTGCTATGTTCTCTTTGGAACAATTATTATTTGCCTTAGGTTATGATCAACGTGTTACCCCTGATACCTTACAACAGATGCTACCAATGTTGCAGGAAGTCTTTGAAAAAGAAACAGCTGCCAGAGAACAACTTAAGGCTGCTGGTGTGACTTCGACTGAAAAGATTTCAAATGAAAAAAGTGGCAAAAGCAAAAAACAACAGCAACCTCCTCATAAGTCCATTGAAAGTGAATGTGATCTTTGCCGTGCAAATCTTTATATTTCAATGGTACGCACCGACGAAGGCAATGTCTATTGCCTGCAACATGCTTTGAAAAATCTCAACAATGGGAATATTCAAGCTAAACAGTGCAAGCTTATTTATGCCTACAACATCGATGACATTGAGAACCTCATAAAGAATCAGAAAGAAAAAATTCAACAAAAGCGTGCGGTAACTGGTAAAAAACAAAAATAG
Protein Sequence
MVVSKDSKRKRKESSPPSTPQQQSSTAVESSPEMPKRTKVQAQRKFAQGQSAPQPSYGSIIAASSSSNTGPSTSSESREPPTEILPNKRPKTEDFLTFLCFRGTSALPPHLDFLNQGKSKEPERPAKKPIVKAVAKKKGKKGRPPKNAKQKEEAMSAKEESEGNKEIVASEENKKNASKIGENNKNSEKVQANNEEKEEKEEEDEDLPTFAVRKRAEVVADGNRRSNRSNIDEKCNNSTETTKRRSNRGCIKGSKATLDHLSEEEDDAYLSTVDDNSKAVNSDMDGKERKAKTPVNSERKSETPSKESETTGKSRKGRPPSTNKKKAVESAKDNDKEESVKSDIKEKGPVKRPRQKESPIFIPSPEPSGRMTRQRAFFEPVKVPNRNNDDTEDEIKKSGTEEIDRETKCKHIEPITKLNEAIKVKGDDKITANEAVVNEDKNKQTQLDVFDFSSDDEQPLAKTIKLKKTGSSKSSPKKNSRGKKNSPKKENIDEANKINEKECTKSEPMESIKKVAADLNVLTPEIDEDSSKIKSKRPSVPTAKNSKRKEHDESFNETDRESTLHSPKKTSNARQSRKKTKVENKDNTALENDAEDKQSGPTKNKRPSRKTKEAATIYMGIIGHRLQMAEDDDDDISLSSFDRPNVREMEKMENELKRNSASIGKGSPPPKQSKSVEMPQPTIVPTVAPVATETKPTTGRRGRPPKNSKMPPAPKREIEGMLVKKGVIAKLSQSTENLAEAKDSKTDPSKAGTEDDEDFLLNEELNEAKRKLEKSFSDSDDEPLAIKAHVKGGDNDADDSPKSVSGVDCVLPSMAAVNASNTTSGGLTSLSILPITTKALTTATQIQPIPPTLPPPPPTQQTAVVTCVTTPAATHPPMTGSMGNIPSPISCNIQPPAPVTVTSQSPFKSIEKKSPVPTSKILNVPATYGIPPASPTGNITAGINTNFGKSPLYIPQSPVYHSPHPSHIRPSANLQQFPVQTAKNPSLVAPQPNTITSHLTTPPSQMTTQSPIKYQTPPTTYPPPIEAYPSPKINPNFLTPKFDRNTLSRPGNGTGNNAFPSPSPVKFDMSGSNSGLLKNSSLSAPNVTMSPKTLISSNMNFLGNNQAASTSVSGQVSNDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTESYIGDQLSGKERRKAKVNMTHEQIHKWLIECSSNPDEIQDDLDDDFDSDLRPNNFSSTPPPTRDDKESTSFSSSSKATRDLGKSESAWSAKGPSLKATPVVATSSTINNRREDIKPIEPTSPRLDEEVEKNSPVMNLMYDKVLANKQSPAPGSVDEKLTQSDKSEKHNEKKTKEEKHTTKVGVSETKQATEKELSTTNKSSSGGKHNSTLKSSNQRKISPSPVTTPTTSIHKQGRKKTAVELTEEKQINTNQKESVNLPEVAATATTNATSNSNVNRTPKRTLVYQQKQTLKQQQQQQQLQQQQQLQKQDNTELKISTTTSHKRSTTTYGTAFSVDNEKSIYSFDKDDTEDQEKANKPSTYRRQSRKDSNIDSGINTTPIAVQPAPPTKPKRNAAAVAEIANKELAGGNSQTSSVSLTLSPSEKTKLVKVSLDSDKTIKATKGGKGGKKNLQTESKPPPAKEAESDSGDGHTFYIPLQSTGASGDGDGGIQGVAVKLGREGPDGPNQKVIMHATLVTKAQMGSNTKPLPESMNVSDIVKNLMSNDKKGSGASTSAAAAAGTNSCSNSLKNVPIGTVQPRFKGDSAVPGPSTSCAGGALQRVNSNSSLFSGSVKSRNAVAAANTSGGGMAGGHSSNKKFKDDTPIKMSNNTAFPRHDDPTQMVEAPIFRPSEKEFSDPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKLLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPVERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDVTSENDEEESEEEVDGVSMECIVKGRSMPLSQFYRIARNTMALWFKNTEPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGFGFPSPGPKGKGSNYARHPWNLKVLTNNTGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATSSWLDLAKDDFRDIHDSCEPAMFSLEQLLFALGYDQRVTPDTLQQMLPMLQEVFEKETAAREQLKAAGVTSTEKISNEKSGKSKKQQQPPHKSIESECDLCRANLYISMVRTDEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNIDDIENLIKNQKEKIQQKRAVTGKKQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00741633;
90% Identity
-
80% Identity
-