Tatr016588.1
Basic Information
- Insect
- Thecophora atra
- Gene Symbol
- pnr
- Assembly
- GCA_937641085.1
- Location
- CALMRH010000043.1:2347987-2351678[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.8 1.5e+04 -3.5 0.1 8 17 496 505 495 508 0.81 2 3 1.8 7.1e+03 -2.5 0.6 5 16 520 531 518 541 0.55 3 3 1.4e-17 5.7e-14 52.2 7.3 1 34 572 604 572 606 0.97
Sequence Information
- Coding Sequence
- ATGTTGACGCAATTTGTTGAAGGCGTTGTTGGAGCAACAACAACAACAGCAGCAAGACTCATTACGATCCCGAACAGAACGAATGTCAGCGAAAAGTTGCTGCTGACTGACGAAAGACGTAAATTTGTTTTATTTTCGCCGCGAACGCATGCGCAGCCGAACGTCATGCGACGCGTGTTCGTCATACTCAGCGTCGGACGGAAACTCATGACGACGCCGATGTCGGTCATGTGGACACTGAAGCACTTGCCAATACGTAGTGTTTACTTGTTGatggaagctcagtccctgcagcaattgcagcagcagcaacagcaacaagctttggctaagcagcagcagcagctgctcgagaagatcaaaagcgaccccagcgagcagcaacacgaccgccaactgcacgccgccaacagcctggaggagcagcagaagcagcagaaggagaagcgccagcaacagtctaaccaaggatctgcacaatctcctctcagcagcgtcgtggtgcagcagcagcaatcgcccagTGAAGAGTTGCTACGCTTGGATCCCTCGGCTTGTGGCGCCGTGCCTCTAGTGCGCACGCAGCAGCGCCGCATCCTGACCACGGCCGGAACTCTCGAGGTGAGTGATCAGCGTGACGAAGACCCGCCCAACTCGCAGGGCGACTTTCACCACTCCGCCGCTGAATACGTTCACATGGCGCCCCGTGACGGCGACCAGCCGCAGCCTGGAACCGTCTACACCTACGCCACCACCGAGAACGGCCAACAGATTCTGTGCgccgacagcgtggccggcattaaaatcgagaccattgacaaggactccggcgccacggaacagcaacagcagcagcagcagctacagcgacagcagcagcaggaccagcaactccatcacccacatcagaatcagcatccgcagcagtgcccaacaccgaactgcgccttccccgaatcgctggtgatgtcgccggccgcgctgcaccagcagcacaacggcaacgcagtgCTCGGCGCCCACTCCGGCGCGCAAGGCAGCCACAACAACACGCCGCTCCGGTTCGAGGAGAACGAGCGGTTCAGCATCATCGATGCGGGCAACCAGCCTCCGTCTACGATTTACTACGACTCGCCGGTCGTCGACGCCAGCACCCATGCCAACGAGTCCAAGACGTTCACGGACCTCGGCACCGTGCCCGCCTTCATTAACTACCCGCAAGCCTCGGCCTACGCCCTGAGCCAGAGCAACGCCATCTACAGCGTGCCCGTGTCGGCGCCGCCGCTCCTCTGCAAGTCGGACCCCAACATGGGCGCCGTCCGCCAACAGAACCAGTACCCGCCCATCCCGCTGTACGAGTCAGTGACCTCTTCGGCTTCGGAGCACGCGCTGTGGGCTGCAGCGGCGTCTAGCGTGGAGTTCCAGAATGTCGGCTACAATCCCTATCACCACCAGGTTGTGGATGATTACAACCCAAACAACATGTCGACCACCCATTGGAGCAGCAACCCGTACGACCCGAGCGTCGGCAACCCCATGGGCGACACGCTCAAGTGCGAATACTGCAACACGCCGTACATTCGCAAGGGCAAGGACATCTTCTGCCCCAACTGCACGGTGATGCAGCATGCGCGCCAAAGCGTGCGACTGCCGTCGCGTCAGGCGAAGCCCAAAGCAGCCGTAGCGGCCAGCAATCGGCGAAACGGGATCAACTGCGCCAACTGCTCGACCACCGCGACCACGCTGTGGCGCCGCAACAACGAAGGCAACCCGGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACATGAATCGTCCGCTGACGATGAAAAAGGACGGCATCCAGACGCGTAAACGGAAGCCGAAGAGCAACGGAAGCCTGCCGATGCGTTCGACTGCGCAGTTGCCAAGTATGCAGCAGTGCGTTAGTTTGATGGTGGCCAATGGAGCGCCACTCTACCCTTCGCAGGTGCAGAGCCTCGCTGTGGGACAACTCAATGGTCAACAGAACGGCATCGGCGAATTGCAGGATATGTCGACGACGTCAGGAGCGCGAAACATGCAGCTGCACTCTGCGGTCAGTGCGATGAATGCGTCCCGTCACCACGGATCGGCTGACAACAACACGTCGCCATACAGCAATCCGCCATCGCAGAGCCAATCGCCGCACTTGCCGAATGCAGCAACGTTAAATCGACAAATCTCGCAATCGTCGTCGCCGATCGATGGGAGCCGATCGGGCATCGCAGAGATTCCAATCAGCGTCATAACGCGAACCGGTTTGCCCGAAAGGACATCGAATAATTGA
- Protein Sequence
- MLTQFVEGVVGATTTTAARLITIPNRTNVSEKLLLTDERRKFVLFSPRTHAQPNVMRRVFVILSVGRKLMTTPMSVMWTLKHLPIRSVYLLMEAQSLQQLQQQQQQQALAKQQQQLLEKIKSDPSEQQHDRQLHAANSLEEQQKQQKEKRQQQSNQGSAQSPLSSVVVQQQQSPSEELLRLDPSACGAVPLVRTQQRRILTTAGTLEVSDQRDEDPPNSQGDFHHSAAEYVHMAPRDGDQPQPGTVYTYATTENGQQILCADSVAGIKIETIDKDSGATEQQQQQQQLQRQQQQDQQLHHPHQNQHPQQCPTPNCAFPESLVMSPAALHQQHNGNAVLGAHSGAQGSHNNTPLRFEENERFSIIDAGNQPPSTIYYDSPVVDASTHANESKTFTDLGTVPAFINYPQASAYALSQSNAIYSVPVSAPPLLCKSDPNMGAVRQQNQYPPIPLYESVTSSASEHALWAAAASSVEFQNVGYNPYHHQVVDDYNPNNMSTTHWSSNPYDPSVGNPMGDTLKCEYCNTPYIRKGKDIFCPNCTVMQHARQSVRLPSRQAKPKAAVAASNRRNGINCANCSTTATTLWRRNNEGNPVCNACGLYYKLHNMNRPLTMKKDGIQTRKRKPKSNGSLPMRSTAQLPSMQQCVSLMVANGAPLYPSQVQSLAVGQLNGQQNGIGELQDMSTTSGARNMQLHSAVSAMNASRHHGSADNNTSPYSNPPSQSQSPHLPNAATLNRQISQSSSPIDGSRSGIAEIPISVITRTGLPERTSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01023512;
- 90% Identity
- -
- 80% Identity
- -