Tatr016594.2
Basic Information
- Insect
- Thecophora atra
- Gene Symbol
- pnr
- Assembly
- GCA_937641085.1
- Location
- CALMRH010000043.1:2377612-2379323[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-18 2.2e-14 53.5 3.2 1 34 123 155 123 157 0.97 2 2 8.6e-19 3.4e-15 56.1 6.2 1 35 180 213 180 214 0.98
Sequence Information
- Coding Sequence
- ATGTACCACTCGAGCGGCGGTTATCCCGATCTAACGGGCGGCTCGGGTGGCTCGGGCGTCGCCTCGTACCACCAGCAAGCGGCGGCCGCCGCCGTAGCCGTCAATGCGCCCGTCTACGTGCCCTCGAACCGCGCCCTCACCAGCAGCCAGTACAACCACGTCGCCGCCCACTTCGGCACGGCGGCGGCGCAGAACGCGTGGACGACGGACAGCTTCGGGTCCGCCCACGCGCACGCCCAGCTGCCGGCACAGTTCTACACGCAGAACGTGATGATGGGCTCGTGGCGGGCCTACGACCCGACGGGCTTCCAGCGCAGCTCGCCGTACGACAGCGCCATGGACTTCCAGTTCGGCGAGGGGCGCGAGTGCGTCAACTGCGGCGCCATCAGCACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCCTGCGGCCTGTACCACAAGATGAACGGCATGAACCGGCCGCTGATCAAGCCGAGCAAGCGACTGGTGAGTGTAACAGCGACGCGCCGCTTGGGCCTCTGCTGCACCAACTGCGGCACGCGCACTACGACGCTGTGGCGCCGCAACAACGAAGGGGAACCCGTCTGCAACGCCTGCGGGCTGTACTTCAAGCTGCACGGCGTCAACCGGCCGCTGGCGATGCGTAAGGACGGCATCCAGACGCGCAAGCGGAAGCCGAAGAAGGCCAACAGCAGCGGCAGCGGCAGCGGCATCGACCCACTCAAGGACGCGAAGGATGAAGAAATGAAGCCTTCGTTGTCGCTGGAGCATCGCCACAGCCTGCCGAGCAACCTCGGCTCCTCTGCGCTGGCTGCCAAGCTGCAGGCGGACCTCGGCCTCAAGACCAGCCACGCCCACAATCACCACATGCATCTGCCGGCCTCCGCGACGCAGCACAGCCGCCACTCCACTTCGAGCCACTCCAACGCCTCCGCATCCGCCGGCGCCACGCCGAACTCCACCAGCGCCTCCTCCTCGCTCAACGCCCACCTCTACTCACCgcagccggcgcatccgcactcggcgcaggcggccgcgcagcagacttcgcagcaccaccaacagctccagcttcagcagcagcagcagcaactgacgcagcagagtttctccagccacacctctgccAAGTACGAGCACCTCCTCGCTACTTCGTCGCCCTGCGGAGGCGGAGGGGCAGGCGGTGGTATCGGTGGCAACTCCAACTCCGCGGCGCTGCTCTCGAACGGCGCTCCGAGCCCCAACTACCATCACTCGGCTGCGGCTGCCGCGATGCACCTGCACCATCACCACCATCACATGGCGCACCACGCCCACCACTCGGCAGCCGCCGCCGCCGCAGCCGCCGCAGCGCATCACTCGAGCCAGCATTCGGGCGTCGGCGGCAGCGGCGGCAGCTACGCCGTCAAATCGGAGCTCAACGCCACCAACTACGACTACGTGAATAACTGTTACTTCGGCGGGTCGTTCGGCGTGCTGGGCGCCTCGGGGGCGGGCGGCGGCGTGCACGGCGCGGCCAGCGAGTTGGCCGGCTACCATCACCAACACAACGTCATCCAAGCGGCAAAACTCATGGCTTCGTCTTAA
- Protein Sequence
- MYHSSGGYPDLTGGSGGSGVASYHQQAAAAAVAVNAPVYVPSNRALTSSQYNHVAAHFGTAAAQNAWTTDSFGSAHAHAQLPAQFYTQNVMMGSWRAYDPTGFQRSSPYDSAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSVTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKANSSGSGSGIDPLKDAKDEEMKPSLSLEHRHSLPSNLGSSALAAKLQADLGLKTSHAHNHHMHLPASATQHSRHSTSSHSNASASAGATPNSTSASSSLNAHLYSPQPAHPHSAQAAAQQTSQHHQQLQLQQQQQQLTQQSFSSHTSAKYEHLLATSSPCGGGGAGGGIGGNSNSAALLSNGAPSPNYHHSAAAAAMHLHHHHHHMAHHAHHSAAAAAAAAAAHHSSQHSGVGGSGGSYAVKSELNATNYDYVNNCYFGGSFGVLGASGAGGGVHGAASELAGYHHQHNVIQAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01023509;
- 90% Identity
- -
- 80% Identity
- -