Basic Information

Insect: Thecophora atra
Gene Symbol: L
Assembly: GCA_937641085.1
Location: CALMRH010000027.1:726999-737105[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.6e-06 0.00068 20.7 1.7 1 23 191 213 191 213 0.98

2 18 0.39 57 5.2 5.8 1 23 219 241 219 241 0.98

3 18 2e-07 3e-05 25.0 3.1 1 23 247 269 247 269 0.99

4 18 9.3e-06 0.0014 19.8 0.3 1 23 275 297 275 297 0.98

5 18 0.38 55 5.3 0.4 2 23 360 383 359 383 0.87

6 18 0.0029 0.43 11.9 0.6 2 23 406 428 405 428 0.96

7 18 0.087 13 7.3 0.4 1 23 533 555 533 555 0.95

8 18 0.0027 0.4 12.0 0.6 2 23 563 584 562 584 0.96

9 18 0.00043 0.063 14.5 0.3 1 23 592 617 592 617 0.94

10 18 0.7 1e+02 4.4 0.0 1 19 622 640 622 642 0.92

11 18 0.055 8 7.9 0.6 2 23 653 675 652 675 0.95

12 18 0.001 0.15 13.3 1.2 1 23 718 741 718 741 0.98

13 18 0.98 1.4e+02 4.0 0.4 1 23 909 933 909 933 0.88

14 18 0.00088 0.13 13.6 4.6 2 23 942 964 941 964 0.96

15 18 0.1 15 7.1 0.1 1 23 970 992 970 992 0.92

16 18 0.19 28 6.2 0.6 2 23 1124 1145 1124 1145 0.94

17 18 0.0047 0.69 11.3 0.1 1 23 1155 1177 1155 1177 0.96

18 18 0.1 15 7.0 1.2 1 23 1184 1206 1184 1206 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.6e-06	0.00068	20.7	1.7	1	23	191	213	191	213	0.98
2	18	0.39	57	5.2	5.8	1	23	219	241	219	241	0.98
3	18	2e-07	3e-05	25.0	3.1	1	23	247	269	247	269	0.99
4	18	9.3e-06	0.0014	19.8	0.3	1	23	275	297	275	297	0.98
5	18	0.38	55	5.3	0.4	2	23	360	383	359	383	0.87
6	18	0.0029	0.43	11.9	0.6	2	23	406	428	405	428	0.96
7	18	0.087	13	7.3	0.4	1	23	533	555	533	555	0.95
8	18	0.0027	0.4	12.0	0.6	2	23	563	584	562	584	0.96
9	18	0.00043	0.063	14.5	0.3	1	23	592	617	592	617	0.94
10	18	0.7	1e+02	4.4	0.0	1	19	622	640	622	642	0.92
11	18	0.055	8	7.9	0.6	2	23	653	675	652	675	0.95
12	18	0.001	0.15	13.3	1.2	1	23	718	741	718	741	0.98
13	18	0.98	1.4e+02	4.0	0.4	1	23	909	933	909	933	0.88
14	18	0.00088	0.13	13.6	4.6	2	23	942	964	941	964	0.96
15	18	0.1	15	7.1	0.1	1	23	970	992	970	992	0.92
16	18	0.19	28	6.2	0.6	2	23	1124	1145	1124	1145	0.94
17	18	0.0047	0.69	11.3	0.1	1	23	1155	1177	1155	1177	0.96
18	18	0.1	15	7.0	1.2	1	23	1184	1206	1184	1206	0.95

Sequence Information

Coding Sequence: ATGATGGCTATGAAGATGCTCTACCGTGGACCAAGTTCGAGATTAGAGAATCTCATTGAGAAGATTCAAGCTACGAAGGAGGTGGTTAACGGAGATATGTACTCCACACACACTTCCTCCAGTTACTCACCCTCGATTTCGGACGGCACCATGACGCCCAATTCACTGCACATGCACCAGCACCAACACCAGTTCCATCATCCTCATTTGCCACACCATCAACAACAGCAGCAGTTGCAGCAACTTCAAGGAATGCCACACGAAGACGAAGGACTCGGCAGAACGTCACACAGACTTCGGCTTGACAATGGTGAGTTTGGCGCCGACGACGCTGAGGAAAATGTAACCGATGATGGAGCGGAGAAGAAGCACGCCGACGACACTCGCTTAAATGGAGCAGCAACAGCAGCGCTGAGCGCAACGGAGCAGCAACAACGGAATCGGCTGGGACGTTGTCACGCCGCCGTAAAAATGCCCACCAAACTGCGTAAAGTCGATAGAGAAGCGGCAAAGTTTCATAAGATGACAGCTGATGGCATTAAAAGCAGCAGCGCCGCCGCAGACGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGGCTGGGATACTTGAAGAAGCACGAACAGAGTCATGCTGAGCATCTTCCCTTCAAGTGCGACTACTGTGCACGCCTCTTCAAGCACAAACGTTCCCGCGATCGTCACACGAAGCTGCACACCGGCGACAGGCGCTACAGATGTCCCCATTGCGAGGCGGCATTTTCCAGAAGCGATCACCTCAAAATTCACATGAAAACGCATGACAACCAGAAACCTTTCCAGTGCACCATCTGCAACCGCGGCTACAACACCGCCGCTGCGCTGACCTCGCACATGCAGAACCACAAGAAGCAAGCCGCCATCCTTGCCGCTGGCGGGAACCCGCAGGCACTCAACTACAGCCCACGATCCACGGGTTCGGCTTCCAGCAACAGCAGCCTGCACAAGCGACGCTACGCCATCGCCTCGGCGGCATCGGACAGCAGCCCCAGCCGCCTCGACTACCCCAAACGACTGCGGAGCACGTACTTGACCTGCACCTACTGCACCAAGAATGACTTCATGTCCCTGGAGCAACTGAATGCGCACATTCAGTCGATGCATGACAAAGAGTTGATGGCAGTGGCGGCGTCGGCGTCTGCTGGCAGCGACACGCAATCCTTTCAGCTTTCCTGCGAATACTGCACCATGAAGTTCCCGAGTATTCCGACCATGTTCCAGCACATGCGCACCACGCACGTCGACCGCCTGACCAGCCCCAACTCCTACTTCGAGCACTTCAACCGTCTGGCCGCCACGGGCACCTTCAGCCCCCGGCTGTTGGCGTCTTCGAAGACGTCCTTGCAACGCGCTGGTGCTGCCTCTGCGGAGGAACACAGCATTAAGCTGGAACAGAATCCAAGTCCGAAAAGCAGTCAGGAGGCGAAAGAGGAAGAACCGACAGATCTAAGCCAAAACAAGCGTCGTTCACAGACGCCCCTTTCGCCTCCTCCTCACCAGCAGCCGATGCAGCATCAGAGTTCGCCTCAAACGACGGAGAATCCGGGTGTTTTCCTCTGCAATCAGTGCAACGCTGGGCTGCCGGATTTCGACAGCTTCCGCAGCCATCTGAAATCGCATTTGGCACACGGCATGAACATGGTTTGTCATCACTGCGGCCTGACACTTCGCGAACCAGCTGAATACGAGCGCCACGTGATCTCGCACTTCCTCATCACCAACGCGGAGTTCAACTGCACGGCTGCCAACTGCCAGAAGTCGTTCGGGAAGGCCGACGAGCTGCAGAAACACTTGCAAGAGAGCCACGTAGCAACGCTCTACAAATGCGGCTTGTGTTCGGAGATCTTCGAGACGACGGTGGCCGTTCAGGTGCATTTTGCATGCGAACATTCGGCCGAGACGAAGATTCTTCGCTGTTCCGCGTGCATGGAAGTCTTTCGCTCGAATCAGGATTTCAACGTCCACGTCAAAACGCGTCACCAAGTTGTCAATGGGTCTTCGTCGTCGCTGTCTTCGCAATCGAATTCGctgcagtgcatgttctgccgcaccgtctgctcgtcggatctggagatgcacttccatttggccgctcatgcgcgccagttccgctgtccttcgtgtccagaaacctttcacgtggaATTCCTCCTCGACCGTCACATGCAGACTCAACACGCTGGCAACGAGGGCGCCTGCTCTGCTCTGCTGCCGCCCAATAACATTGACCCTCCCGCGGCGTCTGGAGCGATCAGCAATGGCAACCACGTGAATCCCATGAATTCCATCTACGTGAACGCGCTGTTTGGCAAATCGCCGCTCGTGCCGCTTGCCGCACAGAATAACAACAACAACATTCTCGACTACAACGTCGCCTTTGCGGCACAATTCAATAAAGGACTTTTCCCGAACGCCGCTGCCAACGCTGCTGCGAAGTTCTACAGTCCTCTGCAAGTGGACACCGGCGGCCTGAAGCATCCGTCGCTAATGTACGGCTTGGGACAGCGTTATTTCGACACCAATCGCACGCTCATCGACATGTACAACCAACATCAGCAGGACAAAGCAGCGTTCCCCAACGCCAGCAACTTCTTCATCAGTCCGAAGCAGACTTTGCAACAGCCACAGCAGCATCAGGACCAAAACACACCCAGCAAAGCACCGTCCTCTCCACTCGGCTTCAGTTGTGGCATGTGCGAGCGCAACGACTTCCGCACGGAGACGGATCTGCTGTCGCATCGGAAAATAGTGCACAACATGAAGACTGGAGTCAGCCTGCGTTGCGCCTACTGCTCGGGCAACTTCAAGTCCCGCAGCGAGTTGGAACATCACATGAAGACCTGCCACAACTCAACGGGGAAGCACAAGTGCCTCATCTGCGACGAGATCTTCCCTTCGCCCGCTATCCTCGCCGAACACAAGCTGCAGCATTCGAAAGTCGGCCAGTCCGGGAAGTGTTCGCACTGCGCCAAGCCGCTGCTGGACGTGGCTGCCTTCAAGGAGCACTTGCCGGAACACAATGCAGAGGGCCAGATGCCGGTGCAGTGCATCTGCTGTCGACAATCGCTGCACTCGGACTTTGAAGTCGGCCTGCATGCGAAATTCCACATGAAATCGTCGGGTGCGCCGGAAGCTGTTTGTGCGCTCTGCCTTGAGTCCATTCCGAACGCCCCGAAGGAGACGAAAGTTTGTGAGAAATGCTGTCGCAAGCACAACCTTAATAACAAGTTCAACAAGCAACGTGAGGCTTACGAACGCATCAACACCAACGCCGCAGCAGCCACCGGAACCGGCGGCGATCCCTCCCGATCCTACATCGAGAATCGGTGTAACCTCTGCAAAATGGTGCTGCCGCATGCCCGGAAGCTGCAGGAGCACCTGGTCGAGCATACGTTCGCCGGGTGCGAGGAGCGCGGCTTCATATGCTACATTTGCTCGGCGGTGTTCACGGCGTCGGCGGGTCTGCTGAAGCACATGACGGAACACGGAGCGAATGCGCGTCCCTACGATTGTAATCTGTGCACGGAAAAGTATTACTTCCGCGCTGAACTCGATCATCATCTGATCGATCACGAACGAAGGAAGACGCGGCCACCGAATGAGGGTAAAATGCAGACAGCGGAAAAGCGCAGAGACAAGAGTGAGGAGATCCGTGAAAGTATGCAGAACAACGCAGAAGTTCCTATTCCGGCAGCGACAGCGCCGACCACAGTCAAAAAGGAGCTCCGTGAAGAACGTAATAAGCACGAAACAGGCGAGGAGGACGACGAGTACATTGAAGTCGAGAAAGTGGCCGAGTTGAGTCACAGTCGCAGCAGCAAGCAGCGCGAAGAGGAAGCAGGACAGAATGCAGAACACGCACAGTCGATGGAGAAGGAGTAG
Protein Sequence: MMAMKMLYRGPSSRLENLIEKIQATKEVVNGDMYSTHTSSSYSPSISDGTMTPNSLHMHQHQHQFHHPHLPHHQQQQQLQQLQGMPHEDEGLGRTSHRLRLDNGEFGADDAEENVTDDGAEKKHADDTRLNGAATAALSATEQQQRNRLGRCHAAVKMPTKLRKVDREAAKFHKMTADGIKSSSAAADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPQALNYSPRSTGSASSNSSLHKRRYAIASAASDSSPSRLDYPKRLRSTYLTCTYCTKNDFMSLEQLNAHIQSMHDKELMAVAASASAGSDTQSFQLSCEYCTMKFPSIPTMFQHMRTTHVDRLTSPNSYFEHFNRLAATGTFSPRLLASSKTSLQRAGAASAEEHSIKLEQNPSPKSSQEAKEEEPTDLSQNKRRSQTPLSPPPHQQPMQHQSSPQTTENPGVFLCNQCNAGLPDFDSFRSHLKSHLAHGMNMVCHHCGLTLREPAEYERHVISHFLITNAEFNCTAANCQKSFGKADELQKHLQESHVATLYKCGLCSEIFETTVAVQVHFACEHSAETKILRCSACMEVFRSNQDFNVHVKTRHQVVNGSSSSLSSQSNSLQCMFCRTVCSSDLEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTQHAGNEGACSALLPPNNIDPPAASGAISNGNHVNPMNSIYVNALFGKSPLVPLAAQNNNNNILDYNVAFAAQFNKGLFPNAAANAAAKFYSPLQVDTGGLKHPSLMYGLGQRYFDTNRTLIDMYNQHQQDKAAFPNASNFFISPKQTLQQPQQHQDQNTPSKAPSSPLGFSCGMCERNDFRTETDLLSHRKIVHNMKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCAKPLLDVAAFKEHLPEHNAEGQMPVQCICCRQSLHSDFEVGLHAKFHMKSSGAPEAVCALCLESIPNAPKETKVCEKCCRKHNLNNKFNKQREAYERINTNAAAATGTGGDPSRSYIENRCNLCKMVLPHARKLQEHLVEHTFAGCEERGFICYICSAVFTASAGLLKHMTEHGANARPYDCNLCTEKYYFRAELDHHLIDHERRKTRPPNEGKMQTAEKRRDKSEEIRESMQNNAEVPIPAATAPTTVKKELREERNKHETGEEDDEYIEVEKVAELSHSRSSKQREEEAGQNAEHAQSMEKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01023317;
90% Identity: -
80% Identity: -