Basic Information

Insect: Thecophora atra
Gene Symbol: -
Assembly: GCA_937641085.1
Location: CALMRH010000065.1:50223-56549[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.72 1.1e+02 4.4 0.4 2 23 6 27 5 27 0.96

2 14 0.15 22 6.5 1.1 1 23 1458 1481 1458 1481 0.94

3 14 0.16 23 6.5 1.0 1 23 1644 1666 1644 1666 0.95

4 14 0.00032 0.048 14.9 3.5 2 23 1669 1690 1669 1690 0.97

5 14 1.3e-05 0.0019 19.3 0.2 3 23 1698 1718 1696 1718 0.98

6 14 4.2e-06 0.00062 20.8 4.5 2 23 1725 1746 1724 1746 0.97

7 14 4.7 6.9e+02 1.8 0.4 5 23 1759 1777 1757 1777 0.96

8 14 1.2 1.7e+02 3.7 5.4 3 23 1784 1805 1782 1805 0.93

9 14 0.012 1.8 9.9 0.1 2 23 1816 1836 1815 1836 0.96

10 14 1.9e-05 0.0028 18.8 0.6 1 19 1842 1860 1842 1864 0.95

11 14 4.9e-06 0.00073 20.6 1.2 1 23 1872 1894 1872 1894 0.98

12 14 8.9e-05 0.013 16.7 7.6 1 23 1900 1922 1900 1923 0.96

13 14 0.00083 0.12 13.6 6.5 1 23 1928 1950 1928 1950 0.98

14 14 0.0015 0.21 12.9 6.0 1 23 1956 1978 1956 1979 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.72	1.1e+02	4.4	0.4	2	23	6	27	5	27	0.96
2	14	0.15	22	6.5	1.1	1	23	1458	1481	1458	1481	0.94
3	14	0.16	23	6.5	1.0	1	23	1644	1666	1644	1666	0.95
4	14	0.00032	0.048	14.9	3.5	2	23	1669	1690	1669	1690	0.97
5	14	1.3e-05	0.0019	19.3	0.2	3	23	1698	1718	1696	1718	0.98
6	14	4.2e-06	0.00062	20.8	4.5	2	23	1725	1746	1724	1746	0.97
7	14	4.7	6.9e+02	1.8	0.4	5	23	1759	1777	1757	1777	0.96
8	14	1.2	1.7e+02	3.7	5.4	3	23	1784	1805	1782	1805	0.93
9	14	0.012	1.8	9.9	0.1	2	23	1816	1836	1815	1836	0.96
10	14	1.9e-05	0.0028	18.8	0.6	1	19	1842	1860	1842	1864	0.95
11	14	4.9e-06	0.00073	20.6	1.2	1	23	1872	1894	1872	1894	0.98
12	14	8.9e-05	0.013	16.7	7.6	1	23	1900	1922	1900	1923	0.96
13	14	0.00083	0.12	13.6	6.5	1	23	1928	1950	1928	1950	0.98
14	14	0.0015	0.21	12.9	6.0	1	23	1956	1978	1956	1979	0.96

Sequence Information

Coding Sequence: ATGGTGGAAAAACTGCAGTGTCCTGTGTGCACATTATTCTTGCACACTGGCATGAACCTATCTGATCATCTAGAAACACATCCGAAAGAGCAAGTTATTCAAGCACTTGTGCAGATGACCGTCAAACGAACAGAAAGCGATGTATCAGCTGACAACAAAGAATGCATCTTAGAAGATTTAAAGAAGCGAGATGTTGAGTCGTCTGCTCTAACTGGATCCTTCAATACAGTAAAGGAACCAGAAGTGGATACCAAATCCATTAATGATACTTCGTCTCCTTTGACTTGCGAAATCGACACGCGACAAGTGAAACAGGACCCAAACGCTGCTTCCATTGCCGAACCAGTTTCGCCGTCAAGTAAACACGTTTTCAATAAACAAAACGGTTCTTCTTCGCCTACTTATCTGAAAAATATTGGAGCAGTTAATTTAATAGCTGGTGTTAGCAATAATATTTCTCTGGGCGACAATGAAGCGATATCACAAAAGCCAACAGATTTCAGCACATTCCCAAATCGATATCAAAATCATCAACAATCAGCGAGTCAAAATAATCAGCAACATTTACAACAAAATCATGTTCCAACTACTCAGCGCAGGACCATGAATACTCTACTAGAAGCAACGCAACACATCGAACAGCATACTCCTGGTTTCTACACTAAACATCACCATCAGCACAGGCAACAATTGCAATTGCTCACACCCATCCATGCCCAGCAACACCGAATGCCGCTCCCATTGCCTTTCACACAACAATCAAAATTAAATGTGATTTACTCACCTACGTTGCCATCACAGCCACCCCAATTGCAGCCTTTTAACTACCAAACTTCAACGCAGCTTCATCAGAAACCTCCACCTGCTTATTGTACGGCCATTAGTCAAATCCGATCTCAACATAACCAAAACAAGCACCAACTTATGCAACGCACAGGAGAAGCACAAGCAGCGAAACAATACGTAGAAAAGAAAAGCGTCACTCCTCTGTCCCATGCTGCTTCACCACAGAAACACAATTCGCAACAAAAAAATGAGACTGTTCATCTGCATCAGGAATTTACCAAAAATGTCGTTTCTAATGCTACTTCCACAATATTACCAAAATTTGTAGCATATCATCAAAGTAATGTGCAGCCACAAACACCAGCCGCTCCTCTCCCACCGCCACCACCAACGTGTGAGCCATCAACTTTAATCATACCAGCACAGCCGGTCCACAGCCGTGCTACACATTCACCTTATCCAGCTATACTTTCAGCTGCAGTTGGGGCGTCTCCCTCGTGCTCATCAGTTCTACGTTTTGCTGAATCGCCTGTTACTGCACACTATTTGGAACGCGATAATGGCGACTTCATCGTTCAGGAAACGCCGAAACATATTGTCGAATGCGTGGAAAAGGACAATGGTGAATTCTCAGTTATTGAGCGCATTTATCAGTCTCCACCGAGTGTTTTGCGAATTCATGACGAGGAAGACGATGAAGACGACGATAAGGATAAAGAAGTACTGGAGGTTGCTGGAAAAGATAAGGCAATTGTTAAAGAGAAAAATGCAAAAGAGCAGCCAAATACAAAAAAGAACAACACACATATCGATCCAGATACAGAAGAGGAGTTTATGAGTATTGATGGTGACAGTGATACAGAGGATTCGAGTTCTGGAAAACCTTTGCCGGATGATAGAGAAAGAAAATTGAAGGAATCCACTGCTAAAGATGTATGCGTTGAGAAACCAACCCTTTGTAGCACAGCTGAAGTGGAGTGCAGCCAAAATACGACAAACACAAACGCTGGCGTGAATAGCGTGAATATTGTCCGAAAGAAATCCTCAAAAAACACGATAACTGTTCTCAGCGACGTGCAATTGAATTTAAACGAATACCTTGATTTGGTCGGTAACATTATAGCTTCAAGCAAAATAGCCAAAAATCAAAGCAACGGTGCTGCGATACCTATTCCACTGGTAAAAGTGGAGAAAGTGGAACCCATGGACGAGTATGAATCGGAGGAACAGCAATGTCCAAGTCCCGTTGGAGGCGAAGAGAAACTCACGACTGCTGCTGAGACTAAGAAGCCATCAGCGGCATCTTTACGAGAACCACCAATCGAAACTACCACCAACAAAGATAACATTACTGAGACTGATGAATTGGTTGCAAATATTAATAGTGATAAGCCAGCTGCAACTGAAAATCCTTCAACAAATAAAACAGAAATCGATAGCAACTTGAATAAGCAGCGCAATGTCGTAAATGCAACTTACTCAAGTCATGCAACAACAAGCGTTATACGTATGGCGACCACCATAACTAGTCAGCAACACCCACAGCAACACCCAGCTGAGAAGCAACCAGTTAACAATGACCACAGCTCGGATGATTTAGAACTGACGAAAGCATCCGATCGACTGAAAAATGTTGTCTTAAACTCGTCTGATGCCGGAGATTCATCCTCGGAAACCCAAATAATACATGAAGTAGTTTCTAATCAGTCTGTTAGTGTGACCTCCCTGCAACCACAACTGAAAAAGGGACCAAAGAAGCTTATAATAAAGCCAAAAGCAACTGCAAATGAAGCCAAGATCGTAAAAGATTCACAAGCGTTTTGCGAAGAGAAACCGACAACATGTGGCAGAGCCAAAAAATTCGAAAACGACCAGGACAAACATGGCCCAACGCATAAAAACGTTGTTATAAAAAATGAGCCCAACATCACCATCGAAGCGACAAGAATTCTGGAGCAGCATTTAAACTTTTCTACACACACGTTCGAGCCGAAACAAGAAAAGTCTTCGCGCCACGATACTTTGGCTGAGTTCAAGCAGGAGATTATGAAATTCAATATAAAGCGGGAAAACGATGAACCCAATCATTCTTCGAAAGTAACTGCTGAAGCGAGAATCACCAAATCCACGCCTTTGCTTCTCGATGAGGAAACACGTGTTCTAATGGAATTTGCTGACTCTAACAAAAAGGAAGTGCCAGATATTCCCTCTAGCGCAAATACTAGTTTCCTTTCGGCCAACTCAATTTTTGGGGTCGCATCTGCAGAGAAAATGCTCCTTAGTTCTACTTCTAATTCAACGTCTTCGTTAGCGACGGCTACCTCCATAACGTCTTGCAATGCTCTGGCGACATTGCGTTGCGAGGACGAGTTCATTGTTCCTGACGCAACAGATGAGGTGCAGGAAATCATCATATCCTCGTGCTATTCTTCACAGTCAGCGTCAGATGTTGCGCTGAACAACTGTAACAATGTCGCAGATGCATCCGATTCCCATCATCAGCAGCACCACCACAATTTTTCCGATTATCCATTCAGTTTTCTGTATGGTGGTGGTAGCGTTGCACAAGAAGTCGCCGCAAAAAGCCACTTCTCGCCAATATATCAGCAGCAGCAACACGACGCTACGACAGCTGCCACCCTTGCCTCGGGAAGCAACTCTGCTACAATAGATGAATTCACTTTGGATCATCCGCATCGGAATCCAACGCCCAGTCGGTACCATCATCACAATGCTCCACCAGCCAGACAATGGTATCAATCTGTTTCCACCTCCAACACTGACTTCGACACTGCATTAGCTGTGGATTGTGGTGGCATTGAAGGTGGTGATGCCGGCAACTATTTGGATTTGGATTCATACAAACGGGTCAACATGAATGGGGGAGCCCAAACAGTAGTAGGGCCATCATCTTCGCTGTCGTCCTTCACGGCGGCCACAGAAAGTAGCTTGGCTGGCTGTACAGCAGATGCTTTGAATATACGCACGGACGAGAAGATGCCAGCAAAGGGAGAGATCTCAGAACAAGAAAGCAATTGTGATATTGAAAATTCTTGGAGTCAATCCATGTATGGCGATATTCCTGTGCGATTTTTTAAGTCGTCCTTTCCTGGGTTATTTCCGCCGGAGAATTGTTGGAACAACGACGAGTACTTCACAGTTCAGGATTTAAGCGCTTCTACAGGAACCACGAACATTAGCAACAGAGCGACTAAGAGTTTTGATTTCCGTCTTCCTTTGGACAATGCTGGAACATCGTCATCAACTGCTGGCTCCAACACACTCCAGCAACACAGCGACGCTGTACCATCTACATCGTCCAAAAAGAAAAGAAAACGGGATTCAAATATAGCGAAAAACTCCGTATTAACAAAACCAATCGCTGCAACAGTAACATCACACGATTTGCTACTACAAGAGCCACAACAGCAGCAGCCGCTGCCACAACAACAAGGACAGCAGCTACATGTGTATCACGACGAACCCTCTACAACATCCGCAGCAATATTGGCTGGTCCATCAACTGCTGCTGCCGCTGCTTCTAAAGTTGCTACTACACAGCCTCAGAGCCGAGTGGGAAAGGTATTTTCCTGTGTCCACTGTTTAGCCAAGTTCTCCAGGCTCAAGGATCGTAACGTACACATGATTGCGCAACATAACTATGTCCTTCGCAACTATCGACTAGTTCCTATGCAGAAAGTGGTGACAGCTACGGCAACGATGGCTAAAACAACTTTCGTGCCTGCTACTATTGCTGATATGGATGTTAGCTCTGCTGGAGCCAGTTGCAGCTCGAAAATACTTTTAGATCAACATCAAAATCTTGAACAGCAAGAGGATTCGAAACAAGGCATTGTAAAAATAGAATTGGAGGCAGCCGAAAATGCTATTTCCAACAGAATTCCTCCTGCCGTCGATGGTGTCGGGCATATTTTGGCCAAGTCCGAGCTGGACGAAAACCAAGGCTTAGCTCTGGCCAATAATGTAGTGGCTGCTGTTAATGAATCTGCGGATCCTGTTTTTCTGCCTTCGCTGACCAGACTTTACAATCTATATCACATGTTGGTTTCATTTAATATTGCAGCCCTGAAGCAAAATCAAACTCTTACAGAAGCAGACGAAAAACTCATGCTCACTTCAATATTTTTCTGCTTTATTTGCCGTCAAAAATTCGCCACCGTAAAATTGTACGACGCTCACATGACTGAACACCCAGCTGAGTGTTATACATGCGGAAAAAAATTCCATCGCTGGCAAAATCTGTCGTTGCATTTAAAGCGCCATTTAGGTTGGAAGGAGTTCGGCTGCAGTATTTGCGATAAGAAGTTTGTAGTTCGCAGCGCTTTGGTGGAACATATGAGAATGCACACAGGACAAAAACCGCTGAAGTGTAATATATGTGGAAAGCACTTTAAGCGCTTCTCTAATCTTGCTCAGCATCGGAAGAGACATGGAAAACAAATTATACGTAAGAAGGAGTTCGTTTGCCATTGCGGCGAAGTTTTGCCATCAAAAGCCCGTTTCCTATGGCATAAGGAGACCCATGACGCCAAGCCAAAGTGTTGTCCCTATTGTTGTGACCGTTTCGTGCACGCGAACTCCTTGCGGCGGCACATTCGCCTAGCTCACTCCGACAAATTCGATTACACCGAGCCAATGGAGTGTCCCATGTGCAAGCAGGTCTTCGCTAAGTCATCCATACGCGCACATATGGCAACGCATTCAATGGACATGCAACACGTCTGCCCAATATGCAGCAAGTCCTTCTCGACCAAATGGAATCTAAAAATTCACTCCTGGGTGCACGCCAATCGAACTGCGAAACCTTTCAAGTGCGAACATTGCCCGAAGGCATTCGTGCGTGAAGTGGACTTCAAGAACCACATGAACGCACATAAACAGATCAAGCCGTATACTTGCGAATATTGCGGTTGCAAATTTATTCGCAAGTACAATTACATGCGCCACCGTCGTGAACATCATGGCAACAAGAAATTCACCTGCGACCTTTGCAAGAAATCGTTTCACCGACACTACTATCTGATTGAGCACAGACGCATCCACACCGGCGAGCGACCATTCCAGTGTACAATTTGTGGCAAGAGTTCAACTACAAAGACTAATCACAACAAACATCTTAAGATACATCATTCTCGCGATCCATTTACTGTTGAAGCCTAA
Protein Sequence: MVEKLQCPVCTLFLHTGMNLSDHLETHPKEQVIQALVQMTVKRTESDVSADNKECILEDLKKRDVESSALTGSFNTVKEPEVDTKSINDTSSPLTCEIDTRQVKQDPNAASIAEPVSPSSKHVFNKQNGSSSPTYLKNIGAVNLIAGVSNNISLGDNEAISQKPTDFSTFPNRYQNHQQSASQNNQQHLQQNHVPTTQRRTMNTLLEATQHIEQHTPGFYTKHHHQHRQQLQLLTPIHAQQHRMPLPLPFTQQSKLNVIYSPTLPSQPPQLQPFNYQTSTQLHQKPPPAYCTAISQIRSQHNQNKHQLMQRTGEAQAAKQYVEKKSVTPLSHAASPQKHNSQQKNETVHLHQEFTKNVVSNATSTILPKFVAYHQSNVQPQTPAAPLPPPPPTCEPSTLIIPAQPVHSRATHSPYPAILSAAVGASPSCSSVLRFAESPVTAHYLERDNGDFIVQETPKHIVECVEKDNGEFSVIERIYQSPPSVLRIHDEEDDEDDDKDKEVLEVAGKDKAIVKEKNAKEQPNTKKNNTHIDPDTEEEFMSIDGDSDTEDSSSGKPLPDDRERKLKESTAKDVCVEKPTLCSTAEVECSQNTTNTNAGVNSVNIVRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKIAKNQSNGAAIPIPLVKVEKVEPMDEYESEEQQCPSPVGGEEKLTTAAETKKPSAASLREPPIETTTNKDNITETDELVANINSDKPAATENPSTNKTEIDSNLNKQRNVVNATYSSHATTSVIRMATTITSQQHPQQHPAEKQPVNNDHSSDDLELTKASDRLKNVVLNSSDAGDSSSETQIIHEVVSNQSVSVTSLQPQLKKGPKKLIIKPKATANEAKIVKDSQAFCEEKPTTCGRAKKFENDQDKHGPTHKNVVIKNEPNITIEATRILEQHLNFSTHTFEPKQEKSSRHDTLAEFKQEIMKFNIKRENDEPNHSSKVTAEARITKSTPLLLDEETRVLMEFADSNKKEVPDIPSSANTSFLSANSIFGVASAEKMLLSSTSNSTSSLATATSITSCNALATLRCEDEFIVPDATDEVQEIIISSCYSSQSASDVALNNCNNVADASDSHHQQHHHNFSDYPFSFLYGGGSVAQEVAAKSHFSPIYQQQQHDATTAATLASGSNSATIDEFTLDHPHRNPTPSRYHHHNAPPARQWYQSVSTSNTDFDTALAVDCGGIEGGDAGNYLDLDSYKRVNMNGGAQTVVGPSSSLSSFTAATESSLAGCTADALNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDIPVRFFKSSFPGLFPPENCWNNDEYFTVQDLSASTGTTNISNRATKSFDFRLPLDNAGTSSSTAGSNTLQQHSDAVPSTSSKKKRKRDSNIAKNSVLTKPIAATVTSHDLLLQEPQQQQPLPQQQGQQLHVYHDEPSTTSAAILAGPSTAAAAASKVATTQPQSRVGKVFSCVHCLAKFSRLKDRNVHMIAQHNYVLRNYRLVPMQKVVTATATMAKTTFVPATIADMDVSSAGASCSSKILLDQHQNLEQQEDSKQGIVKIELEAAENAISNRIPPAVDGVGHILAKSELDENQGLALANNVVAAVNESADPVFLPSLTRLYNLYHMLVSFNIAALKQNQTLTEADEKLMLTSIFFCFICRQKFATVKLYDAHMTEHPAECYTCGKKFHRWQNLSLHLKRHLGWKEFGCSICDKKFVVRSALVEHMRMHTGQKPLKCNICGKHFKRFSNLAQHRKRHGKQIIRKKEFVCHCGEVLPSKARFLWHKETHDAKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYTEPMECPMCKQVFAKSSIRAHMATHSMDMQHVCPICSKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -