Basic Information

Insect: Thecophora atra
Gene Symbol: -
Assembly: GCA_937641085.1
Location: CALMRH010000065.1:1033539-1037841[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00024 0.035 15.3 1.0 1 23 201 223 201 223 0.95

2 15 0.0011 0.17 13.2 2.3 3 23 231 251 229 251 0.95

3 15 1.4e-05 0.002 19.2 0.1 1 23 402 424 402 424 0.98

4 15 0.00027 0.04 15.2 0.7 1 23 430 452 430 452 0.99

5 15 5.3e-05 0.0078 17.4 2.5 1 23 482 504 482 504 0.98

6 15 0.0076 1.1 10.6 0.4 1 23 515 537 515 537 0.94

7 15 0.045 6.7 8.2 3.1 1 23 543 566 543 566 0.96

8 15 0.23 33 6.0 0.4 5 19 577 591 574 592 0.91

9 15 0.00014 0.02 16.1 5.6 1 23 601 623 601 623 0.97

10 15 0.026 3.9 8.9 2.4 3 23 630 650 628 650 0.96

11 15 1e-05 0.0015 19.6 0.3 1 23 659 681 659 681 0.98

12 15 0.0009 0.13 13.5 0.1 3 23 689 709 687 709 0.97

13 15 5.5e-05 0.008 17.3 0.3 1 23 715 737 715 738 0.95

14 15 0.028 4.1 8.8 0.1 1 23 748 770 748 770 0.97

15 15 0.0031 0.45 11.8 0.0 1 20 1305 1324 1305 1327 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00024	0.035	15.3	1.0	1	23	201	223	201	223	0.95
2	15	0.0011	0.17	13.2	2.3	3	23	231	251	229	251	0.95
3	15	1.4e-05	0.002	19.2	0.1	1	23	402	424	402	424	0.98
4	15	0.00027	0.04	15.2	0.7	1	23	430	452	430	452	0.99
5	15	5.3e-05	0.0078	17.4	2.5	1	23	482	504	482	504	0.98
6	15	0.0076	1.1	10.6	0.4	1	23	515	537	515	537	0.94
7	15	0.045	6.7	8.2	3.1	1	23	543	566	543	566	0.96
8	15	0.23	33	6.0	0.4	5	19	577	591	574	592	0.91
9	15	0.00014	0.02	16.1	5.6	1	23	601	623	601	623	0.97
10	15	0.026	3.9	8.9	2.4	3	23	630	650	628	650	0.96
11	15	1e-05	0.0015	19.6	0.3	1	23	659	681	659	681	0.98
12	15	0.0009	0.13	13.5	0.1	3	23	689	709	687	709	0.97
13	15	5.5e-05	0.008	17.3	0.3	1	23	715	737	715	738	0.95
14	15	0.028	4.1	8.8	0.1	1	23	748	770	748	770	0.97
15	15	0.0031	0.45	11.8	0.0	1	20	1305	1324	1305	1327	0.93

Sequence Information

Coding Sequence: ATGGACTCTCAGTCGTACGATATACAGTGGATACACCATGCGGTCGGCGATATGAAGGATACTCAGCAGCTCAGCATCTCTGACGACCCTCCAGAAGATGAGCACGACTTGATAAATGAACAAAGTGGAAATGGACTAGATGGCCAACACAGTCATCAAGATTATTTGGTACATGAGGTGCCCACTGAAGAGGACATCGACCAAATAGCAGCAGAGAATCTGATATTTATGGCCCACGATGGCCAGATGGTTGCTGAGATTATTAATACATCAAGTGGAGCAAACAACGACGTTGTGGAGCCCAGAAAAGAAACATCCATTGACTGTAACCTGTTGGAAACATCTTCAACAGGTGACTGCGTTAACAACATGGAAGAACAAGAAATAGCGGATGGCAGCCACTTGGTGGAATTCAATGAAGAATATGCTGAAACGCAGATGGTGACAGAGGAAGTCATTACAGATGATTGGGTGCAACCGCAGGGCGAGGAACGTGTTGAAATTCCGGTAGATCAGATAATTTGTTCGAGTTCGTTTCAACCTATGGACAACGAAGTGCCGCTGCCCACGGTACAGGATGAGTACACAGCATTGCGTCCGTATCCGTGCGATTTTTGCAGTCGTCGATTTCGCAAAAAGACCAGCCTCATGAATCACATTGTTGCGCATCAAAACGATCGTCCCCATCTATGCAAATTATGTGGATCACGCTTTTTCCGACGTTCCGATCTGATTAATCACTTAAAGGCTCATGCTGAAATGCCAGATCCAGAGTTTGATGATGTAGAGTTTATGAATTTTGTGGAGCAAACTAGGGGCAATCAACAACATCAGCAAAACCACTCGATTGATCACTATTACGACCAAGGTCGTAACAACCGATCACACTGTACCTCTAAAACAGTCAGACAAAATCGCAAGTCAAATCCTGGCATTCGCAGTGGGTACAGTAGCTCTTCCTCTCATAATTCGCGTGTCCGCCCAAGGCTTATGTACCTCAAAGAAGAGAACAATTATACTATAGATGAGTCTCTCAATCAAAAAAGAGACAGCAACGACGCTGCACATGGAACTCAGTACGATTTTATGGAGCGTCATGAAGTCGAAGCTACCACTGCTACTGTGAAGTTCACACAGAGGAATAATCAGGGGCAGCGAGCTGATAAACCAAATAAGTTTCCTGTTACTGATGAAAAGAAACCCTTCGTATGCCAGGAATGCGGGCTTGCTTTCGCACGTGAGAAAGCGTTGATGTCGCATATAAAGAGTCACCGGACGGATTCGCCCTACGAATGCAAGCAATGCAACGAAATGTTTTGGGACACGTCCAGTTTACAAGATCATCTGAAGACACATCAGTTCGAAGACAGTAACTCTGAGTATGAACCCGCTGAAGCTGACGAAACACAATCCGACTCAGAGTCTGAATACTTGTATGGTGAATTTTATTGTTCTAGCTGCGGAATGGCTTTCCACCGACAGGATCTGCTGAAGAGACATGTGAAAATGCATGTTAAGAATGAAGACGACGACATTGGTGGCCACTGCTGCAACACCTGCGGTGAAACCTTTGTCGAAGCGCTAGATTTGCTAGCCCACGCCGAGATACATGCGCGATATCCGCCGTTTAAGTGTGTGCTCTGTGGGGAATGCTTCTTTGAAGAAGCAACGATTAAACGCCATCTACACAGCATGCACGCACATGAAATGACGCCGAACTCATGTATCTTATGTGGCAAGGAATGTCGGGATCGCAAGGCGCTCATGAAACACGCCTGGGATCACTCGCGCGAAAAATGCCACTCTTGTTCCAAGTGCGGCAAGAACTTTCATAATAAAGCTCGTTTAAAGCGGCACATGGCGTCACATCGCGACAAATCAGTTAACTGCGATGTTTGCCACGAGGAGTTTTCCGATGGACGCTCCCTCTCAAATCACCGACACTCACACAGTGCCACTTCGTCTGGGAAGCTATTTCCTtgcaccgagtgcggcaaaacatttggctctcgcagctcccagcaaatacacgttcgcattcatacaggcgagcgtccatatggatgccgttattgctggaaagctttcgccgacggcggcacgttgcgtaaacacgaacgaatccacactggcgaaaaaccttacgcttgtgctgtatgtccgcgagccttcaatcaacgcgttgttcttcgtgaacacattcggacacacCATTCACGGCTCGACATCAAACGGGGCACGTATTATTGCTCCGTTTGCGGCGCCGAAATGGATTCGTCCAACAATTTAATCCAGCATCTGATACAGCACAGTGACACGAACACCGCAATGCATCGTCAACCAGCTACTGGGCCTCGTAAATACAAGAGACGTCGCAAGTTAAAACCTCATGAACTGGCTCACCTTCGTTCAGAGCACAAAGCTAACGGAAAGGTCGATGTATCTGGCAGCGACATCGATATATCGGACCTCGATATGGATAACGTGGAGGACTTCTTGGGCATTACGGAATCAAACTCCATGGGGTCTAACTCTGCTAGAGGAAAACTGAGCCAAAAAGGTCCTCTTGTGGCGGAATACGTGAGCGCAGGAAACTCTTCCTTCCTTGAGCAGAATCATGACTCCTCCTCCGTACAGCAAACAGATACGACTTCCTACGGGAAGGAACGCTGCAACTCAGTCGGCAGCAACTCTGATAGCAAGTTGAACAGCTGGCAAAGCAGGCTTATGAATACGAACTCCAAAGATGAAACGTACAAATCACTGCTCTCAAATTTGGAAAACACGTTGCAAAGCATCGATACGTTAGTTGTTGGCAGCAAAGGCAACGTCGATAATGCTCCAAAAAGTCCTGAAGTAACGTACATCAGTGATCGGCATCTCCTCAGCCCGGTCAAAACGGAACCTTACTCAAGTAGACCTGGTCAACAGGCGGCCAGCACAGCTGCTCGTGTACGAAGCAATAAGAAAGTTCCCAATAGCAAATATACTAAGTCTACGCGTCCTCGCATGATACACACAGAACGCTCAGTATCTCGAACGTCTGCAGAATCCGCTGCTGCCAAACGCCAACGCAGGACACCTAAACGATCTGGAACCAAAATGGTGCAACCTGCCAAACAGAATTCCCATGATAGTAGACTCACAATTGACTATGATATCATTTTACCAGGCATGCAGAGACAAGACAATTCCACTTACAGTCCGGTGGCCAGCATTAAGCATGAATACAACAACCATCAGGAAGGGAACGTTATTAATACCCGACACCAACAAGATACTGACATCTACGATGCCGAGTTGGTGCTAGAAGCCTCGGCGCTGCGAAAAGATGTATACGAAAAGTACAATCCAAATATAGTGAACGACTTGGAGGAGATGCTGCGCTCTCCAGACAAGTCCTCGGATAAAAGCCGACATCGATTCGCCAGCGAGTCGTCGACGGGGAACTACCTTGTGGAGCAGTCAGAGGAAGAGCTGAATATAATCAAAATCGAGCCCACTTCGCCAAACATACATGACATCGTCGTCGGCGCTAGCAACTCAACTGAACAACAAATAAGTCAACGCAGCACCCGCCGGCAAGTAGCTTTGAGTCGCAAGTACTTGGATTTTGAAACAGAGTCCAGCAAAAGAAGTCGTGCTCCAAAAGCATGTCGTCAGCAAAATGTCAACAAGCTGCCGGCGTCGAGCTCGGCCAACAGTACCAAGAATTTCATGGGTTACGTTTCGCAAGAATCTGTCAATGCAAATAGCGTTCCTGCAGGAGACGTAGGAGGCGGTACTGCAGCCGTATTCACGTCGATGCCTTCAGTTGAAGCCGTAGCTTTGTCGAGTAACGTTGCCCAAGCGGCAAATGCGGAAGGTCCAGTTTCATCGAGCCACTCTGTCGGCGAACGGAAGCAACGCTATTACGAGTGCGAAATGTGCTCAGCTGTGTTTTCCGACCGTGCTCAGCTACTAGATCATGTGCCAATCCATATCTAA
Protein Sequence: MDSQSYDIQWIHHAVGDMKDTQQLSISDDPPEDEHDLINEQSGNGLDGQHSHQDYLVHEVPTEEDIDQIAAENLIFMAHDGQMVAEIINTSSGANNDVVEPRKETSIDCNLLETSSTGDCVNNMEEQEIADGSHLVEFNEEYAETQMVTEEVITDDWVQPQGEERVEIPVDQIICSSSFQPMDNEVPLPTVQDEYTALRPYPCDFCSRRFRKKTSLMNHIVAHQNDRPHLCKLCGSRFFRRSDLINHLKAHAEMPDPEFDDVEFMNFVEQTRGNQQHQQNHSIDHYYDQGRNNRSHCTSKTVRQNRKSNPGIRSGYSSSSSHNSRVRPRLMYLKEENNYTIDESLNQKRDSNDAAHGTQYDFMERHEVEATTATVKFTQRNNQGQRADKPNKFPVTDEKKPFVCQECGLAFAREKALMSHIKSHRTDSPYECKQCNEMFWDTSSLQDHLKTHQFEDSNSEYEPAEADETQSDSESEYLYGEFYCSSCGMAFHRQDLLKRHVKMHVKNEDDDIGGHCCNTCGETFVEALDLLAHAEIHARYPPFKCVLCGECFFEEATIKRHLHSMHAHEMTPNSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVNCDVCHEEFSDGRSLSNHRHSHSATSSGKLFPCTECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRTHHSRLDIKRGTYYCSVCGAEMDSSNNLIQHLIQHSDTNTAMHRQPATGPRKYKRRRKLKPHELAHLRSEHKANGKVDVSGSDIDISDLDMDNVEDFLGITESNSMGSNSARGKLSQKGPLVAEYVSAGNSSFLEQNHDSSSVQQTDTTSYGKERCNSVGSNSDSKLNSWQSRLMNTNSKDETYKSLLSNLENTLQSIDTLVVGSKGNVDNAPKSPEVTYISDRHLLSPVKTEPYSSRPGQQAASTAARVRSNKKVPNSKYTKSTRPRMIHTERSVSRTSAESAAAKRQRRTPKRSGTKMVQPAKQNSHDSRLTIDYDIILPGMQRQDNSTYSPVASIKHEYNNHQEGNVINTRHQQDTDIYDAELVLEASALRKDVYEKYNPNIVNDLEEMLRSPDKSSDKSRHRFASESSTGNYLVEQSEEELNIIKIEPTSPNIHDIVVGASNSTEQQISQRSTRRQVALSRKYLDFETESSKRSRAPKACRQQNVNKLPASSSANSTKNFMGYVSQESVNANSVPAGDVGGGTAAVFTSMPSVEAVALSSNVAQAANAEGPVSSSHSVGERKQRYYECEMCSAVFSDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -