Tatr008958.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Thecophora atra
Gene Symbol
Mblk-1
Assembly
GCA_937641085.1
Location
CALMRH010000024.1:2955430-2964052[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.6e-16 3e-12 46.8 0.0 2 45 250 294 249 294 0.96
2 2 7.7e-19 3e-15 56.4 0.0 1 43 767 810 767 812 0.95

Sequence Information

Coding Sequence
ATGCAAAACGAAACGAAACGAAATGAAAAAATCTCCTCTACAAAAAATCTGACGTTGCAATTTCGGGTTGTTTATTCGTGCCTCTTCCCTCTGCGCTCTCCTGCTGCTGCTGGGACGCTCTCCTGCTCCAACAAAAGCGCGCTCCAACCCACATACAAACACACGCAGCGTGGGTCTCGCAATGAGCATAGAGAGTCGCTGGAAAGAGAAGAGAAGGCTTCAGTTCGCCGGTTGAGGATTGGAAGTGATGGAAGCGGGTTCGGCGTGTGTCGTTCGGTTGTCGGTGAGCCGCTCTACTCACCACAGCCGCTCGCCCACCACTCGCAGATGTTCGCTGAATCATGCTCCCCACTCTCCGAAGTTTGCGTTGGTACGAATCAAAGGCTTGAGCGCTGTCAGCAGTTTCTGCAATACGTGTGCTATCTGCCGATTGACTCTGGGTGGGAAAAATCCGGCCTCAATCCGACCTCCGACCGAAATTTGAGACAACACACGAAGCTGAACGAACTCAGAGCTGACAAAACGCTACCAAGGACACTTCTACACACACCGAACTCACCGCACTTCCCTAACCCCCAACCCCCACTCCTGCGACGTCCTCCTTTTTCCGGGTTGGCGATAAAACTGAATCATGTCGAGGATGAAGCGGCGTCCATCGACGACGAGAAGCGTGCCTCCCTAGGAAATTGTGAAAACAAAACGTCATCGCGAAGCACGCCGCTTCCGCCTTCTCGGCGCACGTACAGCGACGACGACCTGAACTGCGCGCTGCAGGACGTTATCAGCGGCAAGCTGGGCACCCGCAAGGCCGCCGTGCAGTACAACATACCGCGCTCCACCCTCCGCAACAAATTCTACAAGTTGACGATGGATAAGAAGCGCCTGCACGCGCCCGCGCCGCCCGACGTCCTACAGCAGCTGCACCGGGAGCTCGAACTGGACAGGGACGCGCTCTCCGCCGACGACGACAGCTGCGACTCGACGACGCACGTGCCGCCCCCGCAGCCGCTGCTCGACGATCTTGCCAGCCGCATTGCAGCCTCCGCCTCGCTGCGCGAACTCTGCGAGGCCAACAGCAGCGAGGAGGCCGTCGCCTCGCCGAAGTCCGTCGCCGCCAATGCAGCCTCTGCAGCAGCGACGGTGCTGGAGCAGCTGAAGCGGCAGTCGAGCACCCCGCATTCGGTCGCCAGTCTGCCGCAAACATCGCCGCAGCCGCAGCCGCAGCAGCAGCCGCAGCTGGCGCCGATCTTGATCGATCCCAACGTGCTGCTGCAAACGCTGCTGCTGTCGGCCGGCGCCCTGCAGAACTCGGCGCTGCAGCCGAAGCTCGACGAGAGCGTCACGCTGCGCGATCTCTTCGGCGCGATTCTCTTCAACTCCGGCGTCAACCTGAAGGACGCGCTGGCGGCCACGCAGGCTGCCGCGCCGGAACCTGCGAAGAACGACAGCGGCAAGCAGCCGAACCTCATCGAGCAGCGGCTGCTCCTGCAACAGCTGCAGCAGCCGACGCACGCGCACTTCGCACACCGATTGCCAAAGTCAGACACGCCCGAGACCAGCTCGTCGCTGGACCCGAACGAGGCGAGCGACGACCCGTCGGTCATTCTGAAAATTCCGTCCTACAAGCCCGTAGCTGGATCTTCCACGTCGGCCGCCGTCACCGCTCCAACATCGGCCGCCGCGCTGGCCTCCTCCGCCGGCGCCCTGCACGCCAGCAACAACTGCAGCGGAAGTCGCGCCGTCGACAGCCCGCATTCGCAGAGCTCCGCGCCGTCACCGCACATCGCTTCGTCCTTGCTGGGCGCCGCAGGCAACGCAGCCGCCACGCATCATCAGCCCAACAACATATCCGTCATTTCGCCGCCGCTGATGCGCCACAGCCTGAGCGCGGACTCGCAGTCGCCGCCCGCGTTCTCGCTGCGCGACGTCATCGCCAACAGCATCCACCGCACGATGAACGAGCAGGCGAACAAGGACGCCCACGCGGCGGCCGCTTCGATGCTGGGCCTCGGCTCCGGCGCGGACGCGGAGCGCAGTGCTGCCGGCGACTACAAGACGCCCAGCATCTCGGTGGTGAAGAACATCGGTGGCACCGACACCACGCGCTTCGGCAAGGCGCCCAACCTGCTCGCTGGGGGCAGCGTCGCCAGCAGCCACAACTCGCACCACCACCACCACCACCCTCACCACCACCTGCAGCACGCCCACCACTCGGCGCACCATCTGAGTCGCCAGGAAGCAGCCGCCCTGGCCGCCGGCAAGGGCACGCGCCCGAAGCGCGGCAAGTACCGCAACTACGACCGCGACAGCCTCGTGGAGGCGGTGAAGGCCGTGCAGCGCGGTGAGATGTCCGTGCACCGGGCTGGCAGCTACTACGGCGTGCCGCACTCGACGCTGGAGTACAAGGTCAAAGAACGTCACCTGATGCGGCCGCGCAAACGCGAGCCGAAGCCGCAACCGCTCGACGGCGGCGGCAGCGGCAACGCCGCCATCGCTTCCTCCTCCAAAGCGAACTCCAACATTCCAAGCCACTCGACGGCCAACAACCTGGACAAGCTGAAGGCGGGCAACGCAGCCGCCGCCAGCTCCAAGCTCAGCACCGCGCTGAAGAACAACAGCAGCGCCGCGGCGTTCCCCAACACGTCGCCGAACGGCATCAAGCTGCCGCTGTTCGACCCGAACGTGGCCGCCGCGCAGCTGCAGTACGCGCCGCACCTCTTCTGGTCGCACTCCGCAGCCGCCTTCGCACCCCTGCAAATGGACTTCAACCGCTCGGGGCCACAAGGTGCCAGTGGCGGCACAAACGCACCTGCAGCGCCCAGCGCCAACGCGCCGCCCTACGTCAACGCAGACATCCTCAAGTCGCACATCCAACGCTATCAGGAGGAGTCGATGCGTAGCGTCGGCGGCCCTGCGCACACGCCCAGCCCCGTCGCCAGCCCCATGGCGGGCCAGAACCACCACGCGTTGCACTACAAGAGCGCCCGCGACCTGGCCGACAACCTCTACGACGGCGGCGGCAGCGCCAACGGCTCCGCGTCGTCCTCCTTCCTGGACGGCATCATCCGCAAGTCGCTCGACCGCAAAAGCAACGACGTGGCGCCCAGCAGCGGCGCGCTGCTCGACCAGCTGCTGGTGAAGAAGATGCCGCGCCCCTTCGCCAACAACCGCAGCAGCGACTACGCGATGTCGGCGGCGCCGTTGAAGCGCTCCGGCAGTCCGCTGCCGCCGCAATATTCCAGCGTCGACATCAAACGCGAGCGCAGCAGTCCGCCGCACAGCGACGCCGAGGAAGCCTCCAACAGCGAAGCCGACGAGCGCCACAACAACAACAACGGCAGCAACCGGATGGCGGCCAGCAACTTGGCGCGTCTGTCGCAGCTGCAGCATCAGCAGCAACGCGGCCGCATCACTTCGCGCGACTCGGACACGGACGGCAGCAGCGGCAGCTTGAAGAGCGGCATGACGGCCGAGCTGCTCTCTTCTAGTCAGCACTACAACAACAACATGAGCGAGCTCAACGGCGGTGGCGGCAACAAACTGGAGTTGGGCAGCGTCGCCACGTCGATCCTGCAGGAGAAACTGGTTCAAATCAAGTCGGAGCGTGGCGCGGAGGAGAATTTATAG
Protein Sequence
MQNETKRNEKISSTKNLTLQFRVVYSCLFPLRSPAAAGTLSCSNKSALQPTYKHTQRGSRNEHRESLEREEKASVRRLRIGSDGSGFGVCRSVVGEPLYSPQPLAHHSQMFAESCSPLSEVCVGTNQRLERCQQFLQYVCYLPIDSGWEKSGLNPTSDRNLRQHTKLNELRADKTLPRTLLHTPNSPHFPNPQPPLLRRPPFSGLAIKLNHVEDEAASIDDEKRASLGNCENKTSSRSTPLPPSRRTYSDDDLNCALQDVISGKLGTRKAAVQYNIPRSTLRNKFYKLTMDKKRLHAPAPPDVLQQLHRELELDRDALSADDDSCDSTTHVPPPQPLLDDLASRIAASASLRELCEANSSEEAVASPKSVAANAASAAATVLEQLKRQSSTPHSVASLPQTSPQPQPQQQPQLAPILIDPNVLLQTLLLSAGALQNSALQPKLDESVTLRDLFGAILFNSGVNLKDALAATQAAAPEPAKNDSGKQPNLIEQRLLLQQLQQPTHAHFAHRLPKSDTPETSSSLDPNEASDDPSVILKIPSYKPVAGSSTSAAVTAPTSAAALASSAGALHASNNCSGSRAVDSPHSQSSAPSPHIASSLLGAAGNAAATHHQPNNISVISPPLMRHSLSADSQSPPAFSLRDVIANSIHRTMNEQANKDAHAAAASMLGLGSGADAERSAAGDYKTPSISVVKNIGGTDTTRFGKAPNLLAGGSVASSHNSHHHHHHPHHHLQHAHHSAHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDGGGSGNAAIASSSKANSNIPSHSTANNLDKLKAGNAAAASSKLSTALKNNSSAAAFPNTSPNGIKLPLFDPNVAAAQLQYAPHLFWSHSAAAFAPLQMDFNRSGPQGASGGTNAPAAPSANAPPYVNADILKSHIQRYQEESMRSVGGPAHTPSPVASPMAGQNHHALHYKSARDLADNLYDGGGSANGSASSSFLDGIIRKSLDRKSNDVAPSSGALLDQLLVKKMPRPFANNRSSDYAMSAAPLKRSGSPLPPQYSSVDIKRERSSPPHSDAEEASNSEADERHNNNNGSNRMAASNLARLSQLQHQQQRGRITSRDSDTDGSSGSLKSGMTAELLSSSQHYNNNMSELNGGGGNKLELGSVATSILQEKLVQIKSERGAEENL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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