Tatr007139.1
Basic Information
- Insect
- Thecophora atra
- Gene Symbol
- retn_1
- Assembly
- GCA_937641085.1
- Location
- CALMRH010000022.1:1833566-1837173[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-14 1.5e-10 42.1 0.0 18 79 107 166 102 167 0.91
Sequence Information
- Coding Sequence
- ATGTTTTTGGTGAAGCGTGGAGCTGCACCGAGCACCGATGCGAACTCCGACGTCGAAGGAAAACGTACAAATGTCGTCAAGTCAAGCTTAAAACGGAGCGAAGAAAGAGTTAAAAGACCCTTATATGAACTCATCTCTACTCCCCTCACCTTATCGCTAGCCCCCTCTCCATTCCAAATGCACTTCGTTGAAAATGGACAAGGAAATAAACGGCATCATTTGATTGAGGTTTTTTATCAAGGGGGCAGCGGTGCAGGCGACCGCCCGAGGTGGGAAATCAAAAGATGTGCATGTGACGTGGACACGCAATTGTTATGCACGCCCATCAACCGTCTGCCAATTATGGCCAAAGCGGTGTTGGACCTGTACGAACTGTACAATTTGGTGGTGGCTCGCGGTGGCCTCGTCGACGTCATCAACAAGAAACTCTGGCAGGAAATCATCAAAGGACTTCGTCTGCCTTCGAGCATTACAAGTGCCGCGTTCACACTTCGAACACAGTAA
- Protein Sequence
- MFLVKRGAAPSTDANSDVEGKRTNVVKSSLKRSEERVKRPLYELISTPLTLSLAPSPFQMHFVENGQGNKRHHLIEVFYQGGSGAGDRPRWEIKRCACDVDTQLLCTPINRLPIMAKAVLDLYELYNLVVARGGLVDVINKKLWQEIIKGLRLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -