Basic Information

Gene Symbol
osa
Assembly
GCA_937641085.1
Location
CALMRH010000089.1:349825-360206[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.9e-25 2.6e-21 76.6 0.0 2 89 594 681 593 681 0.92

Sequence Information

Coding Sequence
ATGAATAAAATACTACCTTGGGAGCATTTCGAAAATTTATATAAAGAGTTGATTGGGCAGAATAGCAATGATAGTTCGAGTGGGGGCGGTCACAGTGGGATGGGTTCCGGGCCGCCGGGTACGCCGAACCCGCAGCAAGTGATGCGGCCGACACCTTCGCCCACGGGTTCATCAGGATCGCGCTCAATGTCGCCGGCTGTTGCACAAAGTCACCCGATTTCGCGACCATCCAGCAACCAGTCGAGCAGCGGTCCGATGCAGCAGCCCGGAATACCGCCGCATATGGGTCAAAGTCTCGGCGGCGGTGGCCCGCCATCGGCTCAAcagcaacagcagcagcagcagcagcagtcgcagttgtctggcGTGGGCGGCGGACTGCAAAATTCGTCCTCCTCCTCAAGCAACTCACCACAACAACCGCCGTCGGGAGCTTCGGGCGGCGGCAGCGGCGTTTCTGCCAACTCTCAGCAAGCGCAACCGCCGCCAACGCAGTCTGTGAACAGCATGCCAACTCAGCCGCCGCCAGGCAGCGCTGGAGGCGGATATCCACCCCAGTCGCATATGCACGGTGCTTACAAAATGGGCCCGAGTGGAGGTCCCAGCCCTGGACCCGGCCCACAAGGCATGACACCAGGCTACCCACCACCACCACAACAAACGCAACAATACACGCAAGgaagctacccgccgcggccacagtatccaccaagtagttacgctcctaccgttccacctccctcgaaccagtccacgtctgccaacaacatgccgcccggcggcccgcagcaatactccgggcgcccgatgccgaaccacagcggcggcggcgcaggtggtcccagtccgcacactcagtttccgccgtatcagaactgggtgccgccctcgccgcaggggcattccggcgctgctggtcctgtcgccccgcccgggagcatggtgggcaaccatatccagagcaaggccacaccgccgcccggcagccctctcccgttgcacagccagggaagcagcgcttcgccgcgtccactgaactacttgaaacagcatttacagcacaagggcagcggaggcgctggcggcgcttgtagtgggtatggagccagtcccgcgccgccgcaaggctacggcaatggaccgggaatgcatcctggaatgccgatgggcccaccgcatcacatgggtccgccgcacggtctgactaccatgggtccacccacgagtaccccgccacagggcggcggcggcggcatgctcagtggcaacataccacccggcggcggcggcggcggtattgccgacgttaacgcggtcaatcagccagagcatttgtcgcaagataacggcatcagctcatcgggatcctcggcgtcgggcggcggtctcgctggacctcatgcggtcacgtcgataataacgactggacccgatggcacgcccatagatgacgtcagccaacaaagcacactctcgaacgcttctgcagcttccggtgaagaccatcaatgtaccacaccgaaatcacgcaaaaacgatccctacagccaaagccatctcgcgccgccgagcacatcgcccggcgccggtccacaccctccgcatccgggcatcgtcagcgaagaatacgaaatgaattcgccaccaaattggacacgaactccagccagcccggtattcaatagccatgttgtgccgccgcaagaaaccttccgcaccacaacaacaaaaaagtcggacagcctgtgcaaattgtacgaaatggatgacaatccagaacggcgcggttggctggacaagttgcgttcattcatggaggagcgacgaactccgatcacggcgtgtccgaccatttccaagcaaccgctcgatttgtataggttatatatttatgttaaagaacgtggaggattcgtcgaggtatgcaaggttacgaagagtaaaacgtggaaggacatcgcaggtttgctgggcattggcgctagcagcagcgctgcctacacgctacggaaacattacacgaagaatctattggccttcgaatgccatttcgatcgcggcgacatcgatccaataccaatcattcaacaagtcgaagcgggcaccaagaagaaatcgaccaaagcagcgtctgttccatcgccagcaggttcgtcgaattctcaagactcatttcctggacctggtgctgcgccgaatgcggctatcgacggttaccccggctacccgggtgcctatcccggttctggcgctcagccagattacacgggagcgggacaaattcagcggccgccttcgcagagcaacacacaaacgccacacgcagGCAACAATACTCAAGCAGCAACCGTCGCTGGTGATAATATTAATGTGAGCAATCCTTTTGATGACCCGGTTGGCGCACCGCCCCGTGCGCCCCCTTATCAACAGGGTGGTCCTTATGCGCCGGTGTCTAGAGCACAAGgttcgccatatccaggccagccaggtgcttatggacaatacggtgctactgatcagtacaattctgcggcaccacctgccgggcaattcagtcaaaatcaaggacagttccagccacagaatcgcaacatgtaccctccctatgggccagagggagaagctcctcagcctggttccaatacgtatgcgccgtatggcagtcgcccgtacagtcagcctccgccaggcagcacgcagtcgccaacaccgccgggagcgaatgttgccagtgcctccggcgtccctccagcgacaggtccaggctctgcagcttccagtccatatccaccggcgacaccgggccagcaagactactacaggcctccagatcaatctcctcagccacgtcggcatccggattttgtcaaagactctcagccgtacccgggctataacacaaggccacaaatgtacggtggttggcaaagcagctcaaatcaataccgcggtcaatacccgtcgtcgccctcgccacaaggctgggtagcagcaccgcagcgaacgactgcaccggggccggctggaccgctggggccgcccaatcagcaggctgctgcagctgctcaatgggaacagcatcggtatgcgcctcagcaagcgccgccactacagcagcagcagcagcagcaggcgccctaccagcaacaaccgcagcaacaacagcccaaccagcagcagcagcaaacgcctcccccgcaatgggcgcagatgggagcgcctggtggcagcgcacagtcagcacaagccgtggtcggacccggttcacctctgcggccaccgccaaacagtcaacagcaacaacaacagccgcagcagcaacGCATGCCCAGCATCGGTGGGCCAGGAATGCCTCCCGGAGGTCCTCAGCAGCAGGTGATCCCGCCAACGGTTGCCAGCGGCGGTCCGGGTAACCTGCCGCCCATGCCTGGCAGCATGACGAAGCAGCCTCCTTTCGTAATGCCGCCGCCGCAGAACAGCTCCGTCGGATCGGCGTGTGGCGCAGCAGTCAGTGGACCGCCCGGTCCACCATCCAGTCCCATGCTGAGCGGCAACAACAGTGGCGCCGTCGCCGGAGTTCCACCGAGCAACATCGGACTGGCGCCAAAGCCGCCGGTACCTCACGTGCAGCCACAGCAACCGGTTTCTGGCAGCCATCAACAGGCGGCCTTTGCAACGCCTCCAACGGCGcagctgcagaaaaaggagatcaacttcccggcagatagcgtcgaagctatcactcccgttctttatcgccggaagcgactggtgaaaagcgacatgtgtcccattgatccctggcgactgtttatggccctgcgctcgggtctgctggctgaatgcacctgggcgctcgacgtcctgaacgtgctgctgttcgacgacacgactgtgcagtacttcggcctgcagcatttgcctggcttgctgacgctgctgctcgagcacttccagaagcagctcgccgaaatgttcaacgacggcgacgatgtggaCGACACCGTTCAGGAAACCATCGCGAAGAATGCGCGCTCCATGAAGCGCATTTGCAAGCGTCACTACGACAGCAGCAGCAACGAGTCGGACGCGAAGGCAACCAAGGCGGGCGTCAGTggcaacatcaccgacggtgccgactgttcggatgatgaaggcatcgatttgggacaagtgcgcgccgcagtgaatccggaggaacgcgttctgatgctctccagtactccgaactacacgatgctctctcgcaaagggaccccagtgcgcatacaggccgccgaggcggacatcttcgtcacggacgggcaaagagtttgggacatcgagacgaacaggctctacgaggaaacttcgcccattggcagcaatgcctggacctacggctcgtcggagcgggagcgacacgaaggcatcatcgaggtgttcaagtccgagttcgtagacattccatttgcacgctctgtGAACAACGGCCGAAGCAATGGCAGCAAAACGCGCGAGGAGAAGCAGCGCCTAATAAATACATTGCACAAAAAAGGCCATCCCAGGTGCCAGGAGGTGATCGCTGAGGGCGAGGAGGAGGAGAGCCACAACGATGTAGATACGACGAAACTCCAGCAGACGTTCAACAAGAAGCGACGGATATTTAATAACACCAGCAGCATTAAAGCCACTGACAGCACCACCACCTCCCACACCGCAGCCAAAAAGTCAAAAATCTACGACGCCGGCGACGAATTCGTGCAGCCGGACACGCTGAAGAAGGACGCGCTGCTGCTGCCAAGCGCTGAACGCGACGCGCCAGCAGCAGCAGCTGTTGTCATCGCTGGAGCGACGACGCTGGACAGCGATTGCCGCGAGGTCGACATGGAACTTGAGCCCGCACAACGACTCGCGAACGGCTACCAGGCTGTGGTCAGCGGCAGCAGCAGCAAAACGTTCGATCCTAGATCAACGCTGCGCGACCCCGCGTTGGTGATACAGCGGCGCCGCGACTCCAGCTACGAGGACGAGTGCTACACACGCGACGAGGCTAGCCTGTACCTGGTGAACGAGAGCCAGGACGCTTTGGCGCGACGCTGCATCTGCCTGTCGAACATCTTCCGCAACTTGACGTTCGTGCCCGGCAACGAAACCATCCTCGCCAAGTCGGCGCGCTTCTTAGCCGTCCTCGGTCGGCTGCTGCTGCTCAACCACGAGCATCTGCAGCGCACGCCGAAGACGCGCAACTACGACCGCGAGGAGGACACGGACTTCACGGACTCGTGCAGCTCGCTGCAAGGGGAGCGCGAGTGGTGGTGGGACTACCTGATCAGCATTCGCGAGAACATGCTGGTGGCCATGGCGAACATTGCCGGCCACCTGGAGCTGTCGCGCTACGAGGAGCTCATCGCACGCCCGCTGATCGACGGCCTCCTGCACTGGGCGGTCTGTCCCAGTGCCCACGGCCAGGATCCGTTCCCCTCGTGCGGCCCCAACACGGCGCTGTCGCCCCAACGTCTGGCGCTGGAGTCGCTGTGCAAGTTGTGCGTGACGGATGCGAACGTGGACCTGGTCATAGCCACGCCGCCACACTCACGCCTCGAGAAGCTGTGCGCCGTCCTGACACGGCATCTCTGCCGCAACGAAGATCAGGTGTTGCGCGAATTCAGCGTCAATCTGCTGCACTACTTGGCGGCCGCCGACAGCGCCATGGCACGCACGGTGGCGCTGCAGAGCCCCTGCATCTCCTACCTGGTGGCGTTCATTGAGCAGGCCGAGCAGACGGCGCTCGGCGTCGCCAATCAGCACGGCATCAACTATTTGCGCGAGAACCCCGACTCCATGGGCACGAGCTTGGACATGCTGCGGCGAGCGGCCGGCACCCTGCTGCATCTGGCGAAGCACCCGGACAACCGGTCGCTGTTCATGCAGCAGGAGCAGCGGCTGCTGGGGCTCGTCATGTCGCACATACTCGATCAGCAGGTGGCTCTGATTATATCGCGCGTGTTGTTCCAAGTGTCGCGCGGGCCTGGGCCCATGCCGTCGATGGAGTACCGCATgcagcaccggcagcagcagcaccagaacgacgctgacaagaagtcgccgccgccgccttcagccagagcagcgaacgagaaaagcagcgaagcagtgaaaactgccgaactccaagcagaaacttctgcagccagtcatcatcatcagcaacagcagcagcagcagcagcagcatcagcagcagcagcagcaacaacaacacgagctgaccaacaacagcaacagcaactgcagcacgagcagcaacgcgagcagctgtaagccagcagcggcggccagtaacgatgagaacagcaacagcaatctgccgcccgtggcgacgctcaacgacgtcagcaacagcagcaccaacagcagcagttgcggcgccgcgagcagcacgagcagtcattacggcggagcagcggtcaacaatgcaaacatgtgcggcgcacgcgaacagcagcagcagcagcagcaccatcaccagcaacatgcaatgagtggcaataagaataatattagtacaacagcaacaataacaggaaatcttagcagtagttttagcagtagttgtagcaatagcaatagcattaataatagcattagtagtaacaatagtaatctgttaaatgttgccgccaacgctgctccggccaccgccgccgccgctgctgctgctgcttctgtccaccagctgccagtagcagtgacgtcggcagcagacgcaacatcgccagccgcacagaactcgacgacggcagcagttgcgtag
Protein Sequence
MNKILPWEHFENLYKELIGQNSNDSSSGGGHSGMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQSHPISRPSSNQSSSGPMQQPGIPPHMGQSLGGGGPPSAQQQQQQQQQQSQLSGVGGGLQNSSSSSSNSPQQPPSGASGGGSGVSANSQQAQPPPTQSVNSMPTQPPPGSAGGGYPPQSHMHGAYKMGPSGGPSPGPGPQGMTPGYPPPPQQTQQYTQGSYPPRPQYPPSSYAPTVPPPSNQSTSANNMPPGGPQQYSGRPMPNHSGGGAGGPSPHTQFPPYQNWVPPSPQGHSGAAGPVAPPGSMVGNHIQSKATPPPGSPLPLHSQGSSASPRPLNYLKQHLQHKGSGGAGGACSGYGASPAPPQGYGNGPGMHPGMPMGPPHHMGPPHGLTTMGPPTSTPPQGGGGGMLSGNIPPGGGGGGIADVNAVNQPEHLSQDNGISSSGSSASGGGLAGPHAVTSIITTGPDGTPIDDVSQQSTLSNASAASGEDHQCTTPKSRKNDPYSQSHLAPPSTSPGAGPHPPHPGIVSEEYEMNSPPNWTRTPASPVFNSHVVPPQETFRTTTTKKSDSLCKLYEMDDNPERRGWLDKLRSFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPIPIIQQVEAGTKKKSTKAASVPSPAGSSNSQDSFPGPGAAPNAAIDGYPGYPGAYPGSGAQPDYTGAGQIQRPPSQSNTQTPHAGNNTQAATVAGDNINVSNPFDDPVGAPPRAPPYQQGGPYAPVSRAQGSPYPGQPGAYGQYGATDQYNSAAPPAGQFSQNQGQFQPQNRNMYPPYGPEGEAPQPGSNTYAPYGSRPYSQPPPGSTQSPTPPGANVASASGVPPATGPGSAASSPYPPATPGQQDYYRPPDQSPQPRRHPDFVKDSQPYPGYNTRPQMYGGWQSSSNQYRGQYPSSPSPQGWVAAPQRTTAPGPAGPLGPPNQQAAAAAQWEQHRYAPQQAPPLQQQQQQQAPYQQQPQQQQPNQQQQQTPPPQWAQMGAPGGSAQSAQAVVGPGSPLRPPPNSQQQQQQPQQQRMPSIGGPGMPPGGPQQQVIPPTVASGGPGNLPPMPGSMTKQPPFVMPPPQNSSVGSACGAAVSGPPGPPSSPMLSGNNSGAVAGVPPSNIGLAPKPPVPHVQPQQPVSGSHQQAAFATPPTAQLQKKEINFPADSVEAITPVLYRRKRLVKSDMCPIDPWRLFMALRSGLLAECTWALDVLNVLLFDDTTVQYFGLQHLPGLLTLLLEHFQKQLAEMFNDGDDVDDTVQETIAKNARSMKRICKRHYDSSSNESDAKATKAGVSGNITDGADCSDDEGIDLGQVRAAVNPEERVLMLSSTPNYTMLSRKGTPVRIQAAEADIFVTDGQRVWDIETNRLYEETSPIGSNAWTYGSSERERHEGIIEVFKSEFVDIPFARSVNNGRSNGSKTREEKQRLINTLHKKGHPRCQEVIAEGEEEESHNDVDTTKLQQTFNKKRRIFNNTSSIKATDSTTTSHTAAKKSKIYDAGDEFVQPDTLKKDALLLPSAERDAPAAAAVVIAGATTLDSDCREVDMELEPAQRLANGYQAVVSGSSSKTFDPRSTLRDPALVIQRRRDSSYEDECYTRDEASLYLVNESQDALARRCICLSNIFRNLTFVPGNETILAKSARFLAVLGRLLLLNHEHLQRTPKTRNYDREEDTDFTDSCSSLQGEREWWWDYLISIRENMLVAMANIAGHLELSRYEELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNTALSPQRLALESLCKLCVTDANVDLVIATPPHSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLFQVSRGPGPMPSMEYRMQHRQQQHQNDADKKSPPPPSARAANEKSSEAVKTAELQAETSAASHHHQQQQQQQQQHQQQQQQQQHELTNNSNSNCSTSSNASSCKPAAAASNDENSNSNLPPVATLNDVSNSSTNSSSCGAASSTSSHYGGAAVNNANMCGAREQQQQQQHHHQQHAMSGNKNNISTTATITGNLSSSFSSSCSNSNSINNSISSNNSNLLNVAANAAPATAAAAAAAASVHQLPVAVTSAADATSPAAQNSTTAAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-