Tpit012837.1
Basic Information
- Insect
- Thaumetopoea pityocampa
- Gene Symbol
- nfxl1
- Assembly
- GCA_017165845.1
- Location
- WUAW01013365.1:1873-4347[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 2.9e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 18 0.019 2.7e+02 2.4 0.6 4 10 169 175 168 175 0.97 3 18 3.1e-07 0.0046 17.6 15.5 3 19 186 202 185 202 0.95 4 18 8.6e-09 0.00013 22.6 13.7 3 19 239 255 237 255 0.92 5 18 1.1 1.6e+04 -3.3 1.2 6 10 280 284 279 284 0.89 6 18 7.7e-10 1.1e-05 26.0 12.6 1 19 290 308 290 308 0.99 7 18 5.9e-06 0.087 13.6 15.8 3 19 345 361 344 361 0.93 8 18 2 2.9e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 18 6e-06 0.088 13.5 18.3 1 18 395 412 395 413 0.97 10 18 8.1e-09 0.00012 22.7 16.9 1 19 422 440 422 440 0.99 11 18 0.0002 2.9 8.7 7.9 9 19 488 498 486 498 0.90 12 18 0.0068 1e+02 3.8 7.3 3 12 509 518 508 518 0.87 13 18 0.41 6e+03 -1.9 3.4 14 18 547 551 547 552 0.85 14 18 0.095 1.4e+03 0.1 0.5 7 12 567 572 567 579 0.83 15 18 4.1e-06 0.061 14.1 3.3 1 11 588 598 588 602 0.93 16 18 5.4e-05 0.79 10.5 12.6 4 18 630 645 628 646 0.84 17 18 2 2.9e+04 -6.4 3.0 9 13 652 656 652 656 0.70 18 18 0.00079 12 6.8 15.5 1 18 687 705 687 706 0.89
Sequence Information
- Coding Sequence
- atggCTCGACGATATCGAGACGCGGCTGCAAAATTACAGCAAAATGTACAGAAACATTTAAAAGAAATGAAAGAGCTTTCATCATCGGAAGACGAAGAACCCTACGAGCCCAGTGTTTTAGAGGGTGTCTTCCAGAGCTATTGGCGAGGTGGTGGAGACACGAAGCTTTTGAACAGGACCAAGAATCTTCTAGAAGAAGCCATTAGTGGCCGTACCGTGACGTGTCTTATTTGCATAGGCTCTATCAAGAGAACTGACGCTATTTGGACATGTGAACACTGTTATTCTTATTTTCATCTGTCCTGTATTCAAAAATGGTCGAACGATAGCATTAGCTTACGAAGTGAAGAGAATCAAGGCTCAATATCTGTCTTCAAACCACAAAAAACGGAATGGTGTTGTCCAAAATGTCGAAATTCATATTCCAAGGAACAGAtcccgcgtaaatatcgatgTTTTTGTGGTAAATTGGATGATCCGCCGTATCATCCTTGGCTGATACCTCATACCTGTGGTGAATTGTGTGAAAAAAGATTATCAGTTGGTGACAATTGCAAACACAGATGTTTGCTTTTATGTCATCCTGGTCCATGCCCACCATGTCCGCAGACTGTGAATGGTATTTGTTATTGTCAGAAAGAACGCAAGAAAGTTAGGTGCAGTGCAGCAAAATGGTCTTGTGGTCAACAGTGTAACAAGACTTTATTGTGTAAAACacataaatgtgaaaatgtatGCCATGAAGGTGACTGCCCTCCATGCAGTTATACAAGCATACAAAACTGTCAGTGTGGTGCTGAAAAAGCTAAAAGACCTTGTAATGATCCATTGTGGCAGTGTAATAAGGTATGCAACAAAACATATTCTTGTGGCTTTCATAAATGTGATGAGATATGTCATTCAGGCAACTGCGGTCCCTGTCCTAATTCTGGGATCAAAACATGCCCTTGTGGTGCAAACGAATCCTTTGTCCAGTGTCCAGATGTTATGGAAACATGCCTAGGTACATGTAATAAGAAACATGATAATTGTGAACATAATTGCCCTGAAAAATGTCATAGAGGACTGTGCCCCCCTTGTCAAGTTTTGATACAGAAAAAATGTCTGTGTTCAACTCATACAAGATCATTACCATGCAGCAAGGAATTTAAATGTGAAACAAAATGCCGTGGTACAAGACCTTGTGGGAAACATGGATGTGCAAGAAAATGCTGCAATGGAAACTGTCCGCCATGTGAAAAAATTTGTGACAAGCCTCTGCAGTGCGGCAGACATAAATGCACTAATATTTGCCACCATGGTCCATGTTACCCTTGCCCTCTTGAATCAAAAGTGACTTGTAGATGCAAAGAGACATATATAACAGTGCCCTGTGGTAGAGAGAGGCACACAAAGCCCCCTAAATGCGGGTTATTGTGTAAGCTTAAATACAAATGTGGGCATAGTGAGGAGAATAAACATCCTTGCCATTTTGGTGATTGTCCTCCATGCAAAGCaatttgcaataaaacatatcaGAAATGTACCCACAAATGTAAAGCAATTTGCCATGAGTATGTAGCGGTTGTCTTTAAACAAGTAGAAAAGCCTGCAACACCATGGGAAGTGCAGCCACCAAAGACTAAAATAATGACTTTAGAATGTCCTCCGTGTGACACACCGGTACCAGTGGTTTGTTTTGGTGAACATGAAACAGATCAACAACCTTGCCATTCAGCTGCAAGAAGGCCCTGTGGAAGGGAATGTGGCCGTCCCTTAGTTTGTGGCAACCATAATTGTACTTTACTTTGTCATTTGTATGGCCCCGATCCAAATTATCCAAATGTACCAATTAGTTGTAAGCAGTGTGACAGAGAATGCTTAGCTCCTCGTCCACCAAAATGTGTTCACAGGTGTTTACTTAGAGCTTGCCACCCTGGCCCATGTCCTCCTTGTGATATACTCGAAAGATTAACATGCCATTGTGGTTTAACAGAAGTTTATCTTCATTGTCGTGAGATAGCTTCAGCAACTGAAGAAGTTTTATCTTGCAAGCAACAATGTCCAAAAAATTTGGAATGTGGGCATAGATGCCGTAACCAATGCCACTCTGGGCATTGTGGTAATCAGGTGTGTACGAAGAAGACTAAAATACATTGTCCATGTGGAAACCTTAAGAAGGAGGCTCCATGTAATATGGTTAAGAATGGAGAGGCTAACATAACATGTGATTCCTCATGTGAAGCTAAAAAATTAGCAGCAAAACTAGAAACCGAGAAAGAAAAACAGAGATTAAAGGAGTTAGAAGAGGAGAAAAACAGAAGAGAATTAGCAGAGTATGAATGGAAGCTTACTGgcaaaaagaagaaatataaaGAGAAGAAAATGATTGTGAATAAAGATGATCAAGGTTTTCTCAAGAGACACTGGGCACCAATATTGACTGTTACAGTAGTTTTTCTAGCAGGgttttattacataatgtatATAGATTAG
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKEMKELSSSEDEEPYEPSVLEGVFQSYWRGGGDTKLLNRTKNLLEEAISGRTVTCLICIGSIKRTDAIWTCEHCYSYFHLSCIQKWSNDSISLRSEENQGSISVFKPQKTEWCCPKCRNSYSKEQIPRKYRCFCGKLDDPPYHPWLIPHTCGELCEKRLSVGDNCKHRCLLLCHPGPCPPCPQTVNGICYCQKERKKVRCSAAKWSCGQQCNKTLLCKTHKCENVCHEGDCPPCSYTSIQNCQCGAEKAKRPCNDPLWQCNKVCNKTYSCGFHKCDEICHSGNCGPCPNSGIKTCPCGANESFVQCPDVMETCLGTCNKKHDNCEHNCPEKCHRGLCPPCQVLIQKKCLCSTHTRSLPCSKEFKCETKCRGTRPCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTNICHHGPCYPCPLESKVTCRCKETYITVPCGRERHTKPPKCGLLCKLKYKCGHSEENKHPCHFGDCPPCKAICNKTYQKCTHKCKAICHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCDTPVPVVCFGEHETDQQPCHSAARRPCGRECGRPLVCGNHNCTLLCHLYGPDPNYPNVPISCKQCDRECLAPRPPKCVHRCLLRACHPGPCPPCDILERLTCHCGLTEVYLHCREIASATEEVLSCKQQCPKNLECGHRCRNQCHSGHCGNQVCTKKTKIHCPCGNLKKEAPCNMVKNGEANITCDSSCEAKKLAAKLETEKEKQRLKELEEEKNRRELAEYEWKLTGKKKKYKEKKMIVNKDDQGFLKRHWAPILTVTVVFLAGFYYIMYID*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- -
- 80% Identity
- -