Basic Information

Insect: Thaumetopoea pityocampa
Gene Symbol: BCL11A
Assembly: GCA_017165845.1
Location: WUAW01015605.1:27381-29276[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 3.7e-05 0.0034 18.4 3.8 1 23 260 282 260 282 0.97

2 5 2.4e-07 2.2e-05 25.3 1.5 1 23 288 310 288 310 0.99

3 5 6.1e-07 5.7e-05 24.0 3.2 2 23 528 549 527 549 0.97

4 5 8e-06 0.00074 20.5 3.3 1 23 555 577 555 577 0.99

5 5 5.2e-05 0.0048 18.0 0.4 1 22 585 606 585 606 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	3.7e-05	0.0034	18.4	3.8	1	23	260	282	260	282	0.97
2	5	2.4e-07	2.2e-05	25.3	1.5	1	23	288	310	288	310	0.99
3	5	6.1e-07	5.7e-05	24.0	3.2	2	23	528	549	527	549	0.97
4	5	8e-06	0.00074	20.5	3.3	1	23	555	577	555	577	0.99
5	5	5.2e-05	0.0048	18.0	0.4	1	22	585	606	585	606	0.97

Sequence Information

Coding Sequence: ATGCCACAGCAACTACCCAGTAAACAAAATCACTCGTCTTCGAGCACCTCGTCAACTAGTTCCGGATGTTCATCAGCTGGAGCACCTCTTCCCCCGCCAACTTTACGTCATCATCCATTGCTACCACCGCCAGATATGCACTCAGCCTTTGGTGTTAGTGGACTCCTAAGAATGCCTCTACCGGGCAGTCTTCCACCATTAGCTCATCCTTCTGTTCCATCTGCGCCTTTATTTGCGAGGCCAAGCCACCATGATCATCGTTTCAGAATGGAGCAGCTCGTTTCAGAACAGTTTCGTCATCATGGATTAAACTTAGCAGCTGCAGCGGCCGCTGTAGCTGCAAACTCTTTACCTCCTCATCAAGCATTCCCTTCGCCGGCGGACAGACCTCCGGTAATTCCCAATTCGGGTTCGGGCCGAGATAGAGTACCACCACCAGTAACTCAGCCTCTTTCACTTGAACCCCAGCTGGATTTTTACTCGCAGCGCTTGCGGCAACTGGCCGGTACGACCAGTCCAGGGGCGGCCACAGGCAATTCGAGCTCTCCTAGCCCCAGGAAGCATTCTCCTCCGTTCGCTTCCCCGTCGCCCTCCCGAGTCGGCCAGACTCCACCGGCGGGCGCCGGACCCGGAACGGTGGACACGCCTCGTGAGGCGACGAGGCCTCACAGTTCAACATCACCAGAACAACGAACTGAACCGCTGGCGGCGGATGCACCGCCCACAGAGCGCCCATCTTCGACACCACTTGTCAAGCGCAACAATGAGGAAGCAATCCACTCCTGTGAATTCTGTGGCAAGAAATTCCGCTTTGAAAACAATCTGATGGTCCATCGACGTTCACATACCCGTGAGAAGCCTTTCAAGTGCACAGAATGTGATGAAACATTCGAAAAagcatccaaattaaaaaagcaCATGAAGATTCATAAAGCTGGAGACACCAATACCGAAGAAAATGATTCAGGTGGTGACACAGGAGATGACGATTCTGATGACGAATTAGATGATGAAGATCTTGATGGTGAGGAAGAAGAAGATAATGAGGATGGAGACGATGTTGAAGAGGCCGAAGATTTAACAGTTTCAAACAGCAGTGCCCCTTCGGTGCCTCCAAGAAAACAAACACCTGCTATGCCAAATAATGCACCGACTGCATCAGTGGTTGGTGAATTAATGGATAAATTTGGACTCTCGAATATTGCTCAATACAGCGAAGCTTTCAAACAAGCTTTGCAAGAATCTGGAAATTCTCTGAAATGGCAACTCGCTAAGGacagagataataataatggccCTCCAAGCGATAAACCAAATGGTATGCCACCGACTGCAGCATTGCGGTTAAAAGAAGAATTTGCGAAGATGCCACCACAGCCACATCCTCTCTTCAACCCTTTTGAAAATCCTTTCGAAGCGTCAAAACGCATGAAATTAGATATGGAACGTGGGGAAGGTTGGTGGTTGCCAACCTTGCATGCTCAGAGACCCCCCGAAAACCTATTCGACGGTCTGAAAAACACCAGCAATGGACTATTACAGAATCCTTTGTTGAAATCAAAAGAGGGTCGTCGTAATGACACGTGTGAATTTTGTGGGAAAGTGTTTAAGAACTGCTCTAACCTGACCGTGCACCGACGGTCTCATACAGGAGAAAAGCCCTATAAATGTGAACTTTGTTCTTATGCGTGCGCGCAGAGTTCCAAGCTGACGAGGCACATGAAGACCCATGGCCGACTCGGTAAGGATGTGTACCGCTGCCGATTTTGTGAaatgcccttctctgtaccttCGACTCTCGAGAAACATATGCGTAAGTGCGTTGTGAATCAAAGTAATGGTGCTCCCTTAGCTCTGTCTGATGACTCTAACGCGTGCCGTGATGAGGCGTCGTGA
Protein Sequence: MPQQLPSKQNHSSSSTSSTSSGCSSAGAPLPPPTLRHHPLLPPPDMHSAFGVSGLLRMPLPGSLPPLAHPSVPSAPLFARPSHHDHRFRMEQLVSEQFRHHGLNLAAAAAAVAANSLPPHQAFPSPADRPPVIPNSGSGRDRVPPPVTQPLSLEPQLDFYSQRLRQLAGTTSPGAATGNSSSPSPRKHSPPFASPSPSRVGQTPPAGAGPGTVDTPREATRPHSSTSPEQRTEPLAADAPPTERPSSTPLVKRNNEEAIHSCEFCGKKFRFENNLMVHRRSHTREKPFKCTECDETFEKASKLKKHMKIHKAGDTNTEENDSGGDTGDDDSDDELDDEDLDGEEEEDNEDGDDVEEAEDLTVSNSSAPSVPPRKQTPAMPNNAPTASVVGELMDKFGLSNIAQYSEAFKQALQESGNSLKWQLAKDRDNNNGPPSDKPNGMPPTAALRLKEEFAKMPPQPHPLFNPFENPFEASKRMKLDMERGEGWWLPTLHAQRPPENLFDGLKNTSNGLLQNPLLKSKEGRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQSNGAPLALSDDSNACRDEAS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00040232;
90% Identity: iTF_01173628;
80% Identity: -