Basic Information

Gene Symbol
-
Assembly
GCA_017165845.1
Location
WUAW01001894.1:17021-25482[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.038 47 4.9 0.0 23 44 343 363 336 365 0.88
2 5 0.12 1.5e+02 3.3 0.1 22 43 442 462 420 465 0.83
3 5 5.1e-05 0.062 14.1 0.5 3 45 586 633 585 634 0.88
4 5 1.4e-05 0.018 15.9 0.0 13 45 757 796 753 797 0.87
5 5 0.7 8.6e+02 0.8 1.2 4 15 951 962 948 965 0.88

Sequence Information

Coding Sequence
ATGGAGCAAATAGTTGTAAAAAGCGAGATGCCCAGCAATGGGGAAATATTGCTTTTTTATGTTGATGaAAACGGAGGCAATGAGCAAGGAGTATTAACCACAGTAGAACACTTAGAGAACCAAGCAGTACAGCTACAACAAGATCAATCATATGTCATACAAGACATTAGTGAATTGTCCAATGATATAAACTTTCTTGAATCTAGCAGTCACAATGAAAATTGGACTGATGTTGATATAAAAAGACTGCTGATATTCTACAATGATAATAAACAGTCTTTTATTTCCGGCACCACAAAGAAAATCCACCTATGGACTGTAGCATGCAAAACAATGCTTATCGGAAAGAACCCAAATTCTTGTGAAGCACAACTTGAGAATTTAAAAGCAAAATACAAAGAAATTTATGGACACATGCAAAAAGGGTTGTTAGTAACATGGCCATATTTTGAAATGTGTCATCAAGTATTTCAGGATGTTTCTATGTATTCAATTAACCAAAATGAagacattcaaataaaaatggatattCCTACAGATTCCAATTCTCAACCAAACATACAAAACTTTTTCGTCATGAAGAATGTAAATCGTCCAACAGTAGATGAAAACGTTTTGACAATGCTCAAATTGTACTTAAAGTACAAGAAAAACTTTCAGGAAGATTATTGGAGTCGTGGTTTATGGGAAACTATAGCAATGGAGATTGGAATTGAGGATGGGGAATATTGGCAAAAACGATTTTTGAATTATAAACAGCATTATTTACGGTTGTTTGATAAACGTCGGGAAAATGGCTCAGAAGGCATTAACTGGCCATATTTGGAATTATTTGACAAAATATTTGAAGGAGATGAAAATTTCCGACGAAAATATGTGGCAGAAGATATTAAGCCAAATCCAGTTCCAAATATTGCGTTTCAATCTCCCATTGAATGGGATAACACAGAGAAAACAGTATTAGtcaaatatttctttgattCTTTTGACGAATTTGAAGATCCTACGATACCAAACAGTTTCTTGTGGAATGAAATTGGACGTTTACTTGATAAAACTGCTGACACATGTAAAGAAAAGTATGAAGAACTTAAAAATGCTCATTTAGATAGATTTATTGAAGGAGATTATAATATGCGTATACGAAAACccatagaaattttatttgataacatTATCTCGAAAGAGATTGAAGCACAATTAGTGAAATGTAGCAATAAACCAGAAAAGTTAGAATTATGGAAAACTGCAGAAATAGATGAATTGGTTAAAttcttctatgataatattgaaTTGTTTAAAGATCCATTATGCCATTTTGTGTGTTGGGCTGCTATCTGTAAGAAGCTTAATAAAGAGTTGCAGACATGCAGAAGTGAATGGGAAGACCTTATGACTCTTTACAAGACTATTTTGAATGACAAGAAAGAGGATCCTGATATGCAAATAGATTGGCGATACATAGAGTTGTTTGATAGGATATTTGACTATGGAATGGATGAAATGTTACTATCTGGTTACGAAAAAGTAatgactgaaaataaaaatcagaaTTCTACAAAAGTTGGTGGTGAGTGCTCACATCGATTCAGAAACTTAAAACAAGTCTACACAGCTTATGTTCAAAGAGAGATAAATAAACCAGAGATGCCTATTTTATGGCCTTATTATCATTTGTGCAAGAAAAAAGTATTTGGATACCGAGCTATCAAATCAAAGCTTAAAAACGGCAAATTAGATTCTGATGATATTGAAGAGTGGACAGCAAaggaaataaaacaattaatcaaCTATTTTTCTCAGAATTCCGATGAGATTACAAGAACGGAGAATTGGTCTAATTTTGCTGCGAATATAGGCAAAAGCGAGAATACATGTAAAGAGAAATTTCTGGAACTGAGAAAGTCTTTTAGGAAATTAAAAACAATGAGGACTAGGAACCCAGATGTGAAGATATCTTGgaagtattttaatatgtttgagcAGATTTATGCACAAATAGAAGAGAATAAGAATGCTATGGAGGTGCAGGATGGTCCGAATTATGTCCAGATGCATTTAGAACAAGGTCAAAAGGGTGGACCAGAAGAAGATGATTACCAGTGCATTATCGTAATACCAGAAGGTCAAGATTTATCAGAAAttgaaaattctaaaataattccACATAACTCTTGCATAGAACTAGAAAATGATAATGCTAATGACAATCCTAAACCAGTGAACATGTGGATAAAACGAACTAAAAAGCGCTTACTCATTTCTTACATCAATTACGTAAGATCACATAAAGGAAAGGAGATAATAGCTAAAGATATGTGGGCAGAAATTGCATCGATGTTGCCCGAAAAGACTCCACGGTCTTGCAGAAAAATGTTCCTGAAACTAAAAGCTTATTACAAGGAGCATGAACACGATGTTAACAAGCAAAATTCTCCATACAAAACTTTAATGGAGAAAATAATGCATTTGAAGCCAAAATTTTCTAAGACAGAACAAAATAAATCTTTGACTGACGAAAGGATTTACAAAGATGTTCCTTTGCCTGATTCAAAAGTAGAACAAGCATTAAAGTATTACCTTCAACATATCGAAGATTTTGTCAATCCGAAATTTGGGAAGAAATACCTTTGGACTGAATTAGCTAATTTTATATCGGAGCCAGTAACAAAAGTGTTcaacaaaataaactatttgaAGCAATGTTATGACATTGAGAGAAACGAAGTAGCTGGAACACCAACGCCTTTTGCAGATTTGCTGAAAGACATTTTGGCAAAAGAAATAGCAATCAAACTTGTTATAGAAAATGAGCCCAAACCTTTAATTGATGAATCTGTTACTGAactatggactgatgatgaaactgATCAGCTTTTGGAATGGTATTTGAGTAATTTGGAGAAGTTTAAGAATCCTAAATATGTAAGGAGCTACCTTTGGATGGAGGCTTCCAATATTCTTAATAAAAGCGCTATTGTCTGTTCAAAGAAGATGTCTGAGATTAGAACACAGTACAGGAATATGGTTAGGGAGACGCCAGAAGCATTAAGCAGCTGGAGGTTTTTGGATTTGTGTCAAAAGATTTATGGGATGGGGAAGAAAGGAAATAGTCACAAGGAAATAGTAACATAG
Protein Sequence
MEQIVVKSEMPSNGEILLFYVDENGGNEQGVLTTVEHLENQAVQLQQDQSYVIQDISELSNDINFLESSSHNENWTDVDIKRLLIFYNDNKQSFISGTTKKIHLWTVACKTMLIGKNPNSCEAQLENLKAKYKEIYGHMQKGLLVTWPYFEMCHQVFQDVSMYSINQNEDIQIKMDIPTDSNSQPNIQNFFVMKNVNRPTVDENVLTMLKLYLKYKKNFQEDYWSRGLWETIAMEIGIEDGEYWQKRFLNYKQHYLRLFDKRRENGSEGINWPYLELFDKIFEGDENFRRKYVAEDIKPNPVPNIAFQSPIEWDNTEKTVLVKYFFDSFDEFEDPTIPNSFLWNEIGRLLDKTADTCKEKYEELKNAHLDRFIEGDYNMRIRKPIEILFDNIISKEIEAQLVKCSNKPEKLELWKTAEIDELVKFFYDNIELFKDPLCHFVCWAAICKKLNKELQTCRSEWEDLMTLYKTILNDKKEDPDMQIDWRYIELFDRIFDYGMDEMLLSGYEKVMTENKNQNSTKVGGECSHRFRNLKQVYTAYVQREINKPEMPILWPYYHLCKKKVFGYRAIKSKLKNGKLDSDDIEEWTAKEIKQLINYFSQNSDEITRTENWSNFAANIGKSENTCKEKFLELRKSFRKLKTMRTRNPDVKISWKYFNMFEQIYAQIEENKNAMEVQDGPNYVQMHLEQGQKGGPEEDDYQCIIVIPEGQDLSEIENSKIIPHNSCIELENDNANDNPKPVNMWIKRTKKRLLISYINYVRSHKGKEIIAKDMWAEIASMLPEKTPRSCRKMFLKLKAYYKEHEHDVNKQNSPYKTLMEKIMHLKPKFSKTEQNKSLTDERIYKDVPLPDSKVEQALKYYLQHIEDFVNPKFGKKYLWTELANFISEPVTKVFNKINYLKQCYDIERNEVAGTPTPFADLLKDILAKEIAIKLVIENEPKPLIDESVTELWTDDETDQLLEWYLSNLEKFKNPKYVRSYLWMEASNILNKSAIVCSKKMSEIRTQYRNMVRETPEALSSWRFLDLCQKIYGMGKKGNSHKEIVT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-