Tpit009830.1
Basic Information
- Insect
- Thaumetopoea pityocampa
- Gene Symbol
- kn_2
- Assembly
- GCA_017165845.1
- Location
- WUAW01009778.1:38885-55382[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-53 1.4e-48 166.3 0.1 41 137 133 229 110 231 0.95
Sequence Information
- Coding Sequence
- ATGCTCGCAGAGGATGCGTCGTGGAAGGCAGTAACCTGTGAGGACGAGGACCCGTGGTTCTGTGAGGACGTCATGTTCCGGAAGGAGGGTGCGGAGCAAGATCGGAAAAAAGACCGATCCCGCACGTTGCAGGCGCCGAGATTTTACATTCGTATCAAATCTTCTGCTTCTCAGTCGTGCCTTGTTGAAGAACTATTCTTCTGTGCTCGATTCACTATGCTCTTCCATGTATCCCTGTCCCGGTCTTTATATCTTAAGGCTCTCATAGCTAATCGAAGTGGTGACCATTTGAGGAGGCCCATTTACAGCAGTGAACGGCTGTGGCCTGATAAGGCAAAGATAATGATGAGACTGGCGAGTGTTAAACTAGACCCAGCCgtgtttatttattttgtcagcAGCAGCGTCGGCGTAGGCCGCGCACACTTCGAGAAACAGCCGCCTAGCAATCTACGCAAAAGCAACTTCTTCCATTTCGTCGTGGCACTATACGATCGCGCTGGCCAGCCAGTGGAGATCGAACGCACCGCCTTCATCGGATTTATTGAGAAAGACCAGgaGGTCGAAGGCCAAAAGACGAACAACGGTATACAGTACAGACTTCAGTTACTTTACGCGAACGGTATAAGACAAGAGCAGGATATATTTGTTCGACTCATTGACTCAGTGACTAAACAGGTAATTGCGGTTACATTACTCATATGA
- Protein Sequence
- MLAEDASWKAVTCEDEDPWFCEDVMFRKEGAEQDRKKDRSRTLQAPRFYIRIKSSASQSCLVEELFFCARFTMLFHVSLSRSLYLKALIANRSGDHLRRPIYSSERLWPDKAKIMMRLASVKLDPAVFIYFVSSSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEVEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQVIAVTLLI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -