Tpit001778.1
Basic Information
- Insect
- Thaumetopoea pityocampa
- Gene Symbol
- Arid5b
- Assembly
- GCA_017165845.1
- Location
- WUAW01001448.1:1-17882[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.3e-15 1.6e-11 45.2 0.1 3 89 216 289 214 289 0.90
Sequence Information
- Coding Sequence
- CACGAAGTCCTAGCGATCAACGACAAAGTGGTAGTCCGTGCAGACGACCTGATGAGCTGGATGTGTACTGGCGAGGAGTGGCGCTGGGGGCTCCGCGCCGTGTGGCGCGGGGCGTGCGCTCCGCCGGCCGAGCCGCGACACACTGCTCCCCTCCACCACACGAAGCTCGACTTCACTGACGTCGACAGAGAGAAGAACGCTATTGCGGCGGATTCCGAATCTCCGGGCGTGGTAGTCTTCTCTTACCCTCAGTATTGCCGATACCGTGCATTGCTGGCGCGTCTGGAAGGCATCCAGGCTGACTGGCTCAGGGATTCCTTGGTTGCGGCGTTGGGAGGGTACGCGGCGCCTACCAACAACACCAGGATATTGTATTGCAAAGACACTTTCGAGTATCCAGAGCTAGAAGGTCACGAGTTCGTGTGTAACCACCTCGCGCCCCGGCTGAAGGGGAGGCCGAGggggcggcgccggcgcgccACCAACCTGTCGCCGTCCTCAGACCGGTCCGACACCTCCGACGCTGCGCAGTCGCCGACGGACCAGACGCCCACCGACCAGACACCCGCGCGTGTGTCCGGTCAGGCGGGTCGCCGCGCCTCGGCGAGGGGCAGCTCGGAAGAGGACGACGGACGGGGGCAGGATCGCGCCTTCATGCATCACCTGAAGCTGTTCTACCGCGAGAGGAACGAGTCGTTCACCGCCTCGCACAGCCTCAAGCACCTGTCGCTGAGAGCGTTGTACCACGCTGTGACGTCACGGGGCGGGTACGAGGCTGTATGTCGTCACAAACTCTGGCGCACCTTCGCTGCAGACCAGCCGGCCAGGACCCGGAGACATTACGAAAGGTTTCTCCTCCCATACGAGAAGCACGAACGCCGGAACGGCAAACCTTTGAAGCTCAATGGCAAGGTCGGCCCCGAACCCCGTACAGTCGCCACCATAGACGTGACGGACTCACCCCTGCGCGAACTCGAACCGACGGAGAAATCACTGCGCACCCCATCGCCTAAAAGAGAAAAATTCGAAGACGATTTGAATCTGATCTCGAAGAATGCGGAGGATTTAAACAGAGAATTCCTAGATTCCTTACCCAAAGAGGAGAAGGTTAAGATATCGGTGAAGCCGGTTGAGAAGTTGATCGAGCCTGATGCGGCGAAGTTGATTGAGGGTGAACTGATGAAGGACGATTTGAATCTGATCTCGAAGAATGCGGAGGATTTAAACAGAGAATTCCTAGATTCCTTACCCAAAGAGGAGAAGGTTAAGATAACGGTGAAGCCGGTTGAGAAGTTGATCGAGCCTGATGCGGCGAAGTTGATTGAGGGTGACGCGATCAGAAATNNNNNNNNNNCGGTGAAGCCGGTTGAGAAGTTGATCGAGCCTGATGCGGCGAAGTTGATTGAGGGTGACGCGATCAGAAATGAGTTGAGTAAAAATGGTGGCCGCGGTATCGGTGCCACAGACACTGACGACAGTAAGGAGTTGTCCTCGAACCGCGGCAGTCTGTTCTTCAGTGAGCTGGCACAGAAATTGAAATTGGGTAATGCAGACACGACATTCCTCAAGGATTTGAGCAGGTCGCAGAGCGGCTCACAGCTGCCGCCGATCAACGGGCACGCGACGAACACTAACGACCAGAAGAGCAGTCGTCCGGTGGGCAGGAGTTCACTGCGCGCCGTCAGGGTGAAGCCTATACGGCAGCAGGCGCCACCTTCCAACACCCNN
- Protein Sequence
- HEVLAINDKVVVRADDLMSWMCTGEEWRWGLRAVWRGACAPPAEPRHTAPLHHTKLDFTDVDREKNAIAADSESPGVVVFSYPQYCRYRALLARLEGIQADWLRDSLVAALGGYAAPTNNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRATNLSPSSDRSDTSDAAQSPTDQTPTDQTPARVSGQAGRRASARGSSEEDDGRGQDRAFMHHLKLFYRERNESFTASHSLKHLSLRALYHAVTSRGGYEAVCRHKLWRTFAADQPARTRRHYERFLLPYEKHERRNGKPLKLNGKVGPEPRTVATIDVTDSPLRELEPTEKSLRTPSPKREKFEDDLNLISKNAEDLNREFLDSLPKEEKVKISVKPVEKLIEPDAAKLIEGELMKDDLNLISKNAEDLNREFLDSLPKEEKVKITVKPVEKLIEPDAAKLIEGDAIRNXXXXVKPVEKLIEPDAAKLIEGDAIRNELSKNGGRGIGATDTDDSKELSSNRGSLFFSELAQKLKLGNADTTFLKDLSRSQSGSQLPPINGHATNTNDQKSSRPVGRSSLRAVRVKPIRQQAPPSNTX
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -