Tmat020820.1
Basic Information
- Insect
- Thalpophila matura
- Gene Symbol
- -
- Assembly
- GCA_948465475.1
- Location
- OX419184.1:17099460-17110309[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.24 17 6.5 0.2 2 21 1698 1717 1697 1718 0.88 2 7 0.00012 0.008 16.9 0.7 2 23 1830 1851 1829 1851 0.95 3 7 0.0014 0.093 13.6 4.0 1 23 1871 1893 1871 1893 0.98 4 7 0.0055 0.38 11.7 4.2 1 23 1932 1954 1932 1954 0.98 5 7 0.01 0.7 10.8 7.0 1 23 1977 1999 1977 1999 0.96 6 7 0.015 1 10.3 0.5 1 20 2023 2042 2023 2044 0.93 7 7 0.47 32 5.6 0.5 5 23 2395 2414 2392 2414 0.90
Sequence Information
- Coding Sequence
- ATGGATAGGTTGAGCCACTTGCGGGGAGAAGCGGGGGGCTCGCGGGACTCCACGCTCGACACCACGTCCCCGCCGAGCGAGTCCTTCATGACCGCCAACGAGAGTTCCTCCAAGTACTTTTCTCTGTCAGAAGTTGACTCTGTTGACTCAACATTCGACATTTCTTCTATAAAAGATGTATCGCTGGCCAGCACCACCACCGACTCCGAGGGGACCATGACAAACGCTGACGAGCTGATGAACCTATCACCGATTGGGAAGAAAAGTGATATGCTAGATAGCTACAAAATTGGTAAACAGATTGAGGCAGCAAACATTTTGTCAGGCGGTGTTGACATTTTCGATGACAATGAAAATTCTTATGATGGTGATGAGCTGGTGATTGATGACAATGTTGACATTGATGATAAGTCAAGTTCTGACCTGAAGCAGTCGGAAGGCCTTCAGTTTAAGTCTGATGAGAATATGATAGAGTCTACCTTGATAAATGAGGAGATGGACATAGCTAGTAAAGATACAGAAGTGGTGCTACAAATTGATGGTAAAAACGTAGATGCTATAGATATTGGTAATGGATTGTACTTGTATAGGAAGGAAGGGCAAGAGGAGCTGGCAGCTGTTCAAATAATTGATGATGATCAGCAACAAACCAGCTTCAAGTTCCTGAAAGTGCGTGAAAATGCGGAGGGAAATTTAGAAGTTTATGAAGAAATAGAGATAGAAGTACCAAAAGAAGTGCCTGCAAAAGAAGGGAAGACGGCTGATAAGAAAATATCATCACATGTGCCTATAAAGGATATCAATAAAGTCATAAGCGAGTCTGCTTGCAACAAAGTTGCTGAAAGAAAAAATAAAACACCAAGAAAAGAACCAATTTTAACAATTACTGAAGTTGAATGTGAAGGAAATAAAGAAACCTCACCTGATAGTAAATCAGAATTCAATATAAATGGGAAAATGATGAAGTTTAGTGAATCACGAAAATCTCCCGTTATAGGTAGTTTTACGCCCATGACATACCACTCAACACCCAATAAAGAACCTATACCATTAACTAAAACTATGGTCGACCAACAATTGCATCCTAACAGGCATTCTGATAATGTCAAAAAAACAATAGAAGTACATACTGATAGTTGTAAGCAAAGAAATACTGAAACTCCTTCTAAAAATAAAGAGGGTGATGATAATAAAACCAATGAAACAATAGGTACTGAAAAAGAGATTGTGATTGATGACTCAGTTGAAGAAGTTACTGTGGCTGAAGAAACAGATAAGGAAACTATAGATATAAAGAATGTTGATAATGATAAATCTAAACCGTTGGAACCAAGTAATGATGAAGAGTTGAATGTTGCCAACGACACATCGGATGTTCCAATGGAACAAGAGAATGTCATTGATTCAACAGAAAAAGATATAAATAAAGAAAAAACTATATTGAAGCAGAATATACAAAGTAAAATTGTAAATGAAGAGGACAAAGAAGAAAAATGTGAGAATATAGTAAATATACAAGAAAATATGGAAGACATTGAAATTGTAGAAATAGTTGCCGAAAGTGTAGCAGATAAAGGTGAGGAAAAAATTGAAAATCTCGTTGAAGGCGATAGTGATAACCTAACAAATCTGAATAATATTATTGAAATAAGTGAAGATGAAGTTAAGATTTCTGAACCTATCAATCTTCAAGTAAATAATAAAGATGTTAAAGAAATTGAAGTGAGCGTTAAGGAAATTAAGGCAATAGTTAACGACAATACTCATGGTGATAGTCAAGATGTGGCCAAAGTTGAAGAAATTATTTACGATATAACAACAGACCCAGATACTGAAGAAATTATTATAATTGATGATAGTGAAATAGATGAAACCAAAATCGAAGAAAAAACAAAAGATGAAAATATTAAAAGCAATGTTCAGGAAGACGACAAAGTTGAAACAATTATTGCAATAAACAATGAAGAAGAATCCAAAATAGAAGTTAGTGTTCAGGAAAATAATAAGAAAAATACTAAAAGCATTCAAGCTGATTCAACTTCCGCTGTTACTGATATTGAAAAAGATGATACGGCTCCCTTGTACGATATAGTGAAAAATAATCAATCAAAAATACCTATAACAAAACAAGAAATGAAAAAAGAAACGGCTAAACCAACCAATGATACATCAGTAATAAAGCCTTCAAAACCGATTGGTGCCAAACAAGAAAAAGTTGAATTGAAATCCGAACCCTCTGAAGAAAGAGGTGCTTTGCAAGGAGTTGTTAAAGATGTTGTGCTAGATAAATCAACACTACAATCATGTAGTAAGCCGGAAGAATCCCAAAAAACAATTTTAAAAATACATAAAATTGAAGTTAAGCCAGAAACTACCAAGCTTGAAGTACTATCCAATGAGACACCATCTCTTATTTCTATGGTAAAAAATAAAAAAGAAATAAATGTGCTTAAAAAGTCTCCTAAAAAGGAATCTAAAAAGGCTATTCCAATTCATGAATCTCAATCTACGGCAGTGCCAATGGAAGTTGACAGCAGCACCAACGTCAAGGAGGAAATTCCTAGCAAAATGAAGGTCAGCAGTGACAAAGTACCTAGCAGTGAAGTAAAGGAACAAAAACCTGTCACCCAAGAAGCATTTCAACCCTCTCCTGAATTAAAACCTCAGCGACTCACTAAAGTGGATGAAAAGCGGGGAATAAAGACACCACCAAAAGACACTATTACTGAGGAACTGAGTAGCGTCAAAGATGTTCAAGTAAATAAAGTGCCTTATGAAGATCTGGCTCAGCCTGGTTGCTCAGGCACACAAGATGTTAGTAGTACGTCAACAGACAGCCTTCCGATACAAAACAATGAAAGTAGAAATGAATCAGAAGATAATAGGGATGATCCCGACGGGGATGAACCTCAACCAGGCGGAAGTAAAAAAGAGGTGCCTTTTGGCAAATGGACAGCTACTAACAGGAAAGAGTTCTTATATAATTTAAAACATAGAACCCCCGTTCCTGTACCGCCGGCTGTGCCATCTACTAGCAGTAATCAGCTGAAAAGTTCCAATGATCTTAACAAAAGAGATGTTCTCCAGAAAATTGACAGTCAAAGGCAGTCGAGTAGTGCAGCAGCTTTAGCTAAAACTCAAGAAGCCAATAAACTTAATAAAAATGAGACTGCATTTACGAGCAAAACCAACATAAATCTAAATAAAGATAAAGAAGATACTCAGGAAATTAAAGTTTCTCCTAAGACGGAGACAGATAAACATACATCGGATACTGTGGCTGAAAAACCTACCATAAAAGAAGATGTAACAAATGACATTCAAACCGAAGCATCCCAAGTGGCAACTGTGACGAGTGTAATGAAAGATTCTGCCGAAAGAACTGAAGTCAATTACCAAGATTTGATCGATAAAACCATTGAAGATATGATACATAGAACATTAGTAGCTCCAAAAGCGGGTCAAGATGAACCTACCCAAACCTCGGCAAATGATTCAAATGTCTCTCAAAGTGGTAAATATCCACATACTTATCAACCAACTGACCAAGCCACGCTGGACGAGATAGAAATGAAAATGAATGAATTGCATGGAATACCATTTATTGAAAGACCTCCCCATGAATTACCTGTGGTTCCTTTAACTGATCCTAAACCAAAAACCTACTCTAAAGCTGATAAAGAAAAGCTACCAGTTCCTAATAAAACTACAAAGATACCTAATCTCCTACCGTTTCCAAATAAAACTCAACAAAAGATTATCAAGGAAAGTGTAATAGAAGTGGAATCTGAAGATGAAATAATAGAGCACGAGCCTATTACAGGAGATATTGATATAAATAAGAAAAATGTGGCAGCTAAGCTTCCGCCTAAGGAAAATATACTATTGTTTGCGGATACAGACAAACCTACGGATGCTGCTAAAAAAGAACCTATTATCACAGAAAAAGAATTCGATAAATTTGCGAGACGTAATTCCAAAACTTATGAGAATTGCCTCACTGTGAACTTCGATATCAACGAACCACACAACGTTTTTCAAACATTAGTGGAGAAAGATCCACATCCAAAGAGCTACTCTAGGAATGATATTGCTCGCATCGATCCGAAAGCCAAGCTGCCGTATAAATATCAAAATGTACGTCAAACTATCCAACCGGCTAAAATACATCCTCCAAATAAATTGGGCACGACTACTGAAGATTCTTCTAACAGGAATCAATCTAAGTTACAGAAAGCTTATCAATCAGCTTTATCAGCTAAACGTCAGATGGAATGCCCTATTACTATAATCGAAGATAAACCGGTAAAAGTAGTCTTCATGGACAATATGGAGTTTGTTCCCAATCAATTAAATATCCAGGGACAACAACTTTCACCTGCGAAGAAACTAATCACCGAACCAGATAGTTTCACCGTTAGTACTCTTGACTCTTTAGAATCCGAGGTGTTGGATGCTACTGATGACGCTAAATCTCAAGAAGAAGTTAAAACCAAAAGTAAGCATCAAAGAAAACAAGTTTTGACTCCTGTTGACGAACCCGAACTTGAATTAATTGAACCAAAAGATTTAGGCCTTGAAGTGTCGCCCAAAAAGAAAAGGAAAACTGATGAAGATAAAAATGTTAAGTATCCTATGCGAAAGAAATATTATCTTCTCGGTTCTAATACAGTAGCAGACGATAAATTTACACACACACCAGAAGTTATTAAAAATCCACTCAAAGAAACCGTAAATCGTAATGACAACGGCGTCGCTCACAAAAATGCTGTCTCAGCTATAGACAGTTTGGTGAAAGCCGCTGAATTACTTGAACACCAATCAGAAAATATGAATATTATCGATTCTCCAAATCCTGATAGTCAACAGAGTACTCCTGTCAAGAGAGGAAGAGGTCGCCCGAGAAAATATCCTCTACCCGAAGGAGGAGTGGATAAAAATAAAGTGCCAAGCCCACAAAAGAAGCCACGGTTAATAGATGCCAAAGTTCCAAAACGTGATAACGTAACTACTGACGATGATGATGATGATGACAGCGATGATCAAATCATCAAAGAAAATTGGACGATGGGAAAAATTAATGAAAATATCGTATGTCCCATTTGTAACAAATTATTCAGGACAGAGAACGTAGTGTTCAAACATGTGAAACATTGCACTGGCCCTTCGCCGAGTCGATCTGGCTCGGACAAGAGAAGTCCAAGAAGAATGAGACCATCCCAAGAATCGGATTCTAAGTCACATGGTAGTAAATCCGATGATATGGACATTGACGATGATAAACCACTTGTGGTCAGAAAAGAAACTCCTAAAAAACGTAAATCCAAAGATTCCGTTTCTAAATTAAACGATATAGATGATGTCCTTATTGAAGATACACCACCGGTCAAGGAGAAGCCTGAGAAGAAAGAGAAGGAGATTGATGACAGGAAAATTCACGAATCTAGAAAACCAAGAGCCAAAATATTTCCCAAAAGTAATGATTTGGTGTGCGAGTTCTGTGGCAAAACATTCAGGCAACTATCTTATTTGGTTAGCCATAAATTGCAGCACAAGAAAGACGAACCAAAGAAAACTGAAAAGGACCCTCCAGTTGCAATAAAATCAGTGTACAGCTGTGAAGTTTGCAAGAAAGAGTTCAGGAAGCTACATCATCTAGTTCAACACCGGATTATTCATAACCCTAGCTCAGCGCCCGCGAGGTTCCTAAGAAAAAGCTCTTCAGAGCAGTCTGACACTAAAATTGAAAAAGAACCGGGTACTGCTAAACCAAGCGAAGACCCAGGCGCCGGTTTCCGCTGCGAGCCATGTGACAAGTCATTCAGAAAACTGCACCATTTAGTGGAGCACAGGGAAACTCATGACGGTATAAACAGACAGAAAGTCACGCCGGTGGTACAAAACAACGTTGAGAAACCCGTAACTCTACATCAATGCGAGGTTTGTAAGAAAACGTTCAGGAAGCTACATCACTTGATTGAACACAAAGAGCAACATGTAGAGACCAGTTCAGAAAAGTCCGATGACAAAAGTGTCAAGAGTTCGCTATCAACTAGAGACATCATACACGAGTGTTCATTGTGTTACATGGTGTTCCCTAATGAGCACTCGCTGAACAAACACACGATCATCTGCCAAAGGAAGAAACGGCAGTCGAAGCAAGCTAAACCAACTGAAGAAACTGAGGTAATTGAACCTGTTGAAGGCGCAAGTGAGACTACGAAGATAGAAGAAAAAATCGAGAACGTGGATTCTCCAAAACCAGAAGTGGAAGAAGTCAAAGACGATGAGCCCAAAAAGGCGATTATTGAAAATATAGAATTGCCTAAAGATATACCTAAAGCAGCTGAAGAAAAACCCGTAGAAGTTGTTAAAGAGATAGAAAAAGAGACTGTTCAACAAGAAGTAGAAACTAAGCCGGTCGAACCGCAAGTGGTCCCTGCAAAGAAAGAATCGGTAGAAACAGAAAATGTTAAAACAGAAATAAAGCCGGCGGTTCCGGTGAAAATTAAAAAAGTTGAAGTTAAAGAAACTATTAAAGTCCACGAAACCCCTAAAAGGAAAACTTCCGTCAAAGAGAAATCTGCGGTCAGTGCAAGCAAACGCCTCAGAGCTGCAGCTACTGTCACAGTTCCCCACGACCCTAAGCCAGCGGTAGAATCGAGCGACGACGACGAAATCCGGTACATGCTCAACCCGAACTTCAAAGTCGAAGACGTGACCGAAGAGAAAGTCTTCATGAAAGTCCGGGCGAACAAGCGCAGTTCCCTACAAATAGAACGACCGAACTCCAAAGACTTAGTTAAGAGAAGAACGTCATTACAACACCCGCCCAAAATACCGCGCTTGAAGCCGAAAGCCGTCGAACCTAACACCGCCACTGTGAAAAATATAGCTAAAGCACCCAAATCAGAACCAGCGCCTTCCACTGATTCTGACGATAGTGAAACCGTAAAATACTCTTTCCCAAAAACCATTCCTGAAAAATCAACGAAACCCGCACAAGATCGCACACCTAAAGATGTAGAAAGAAAAACTCAAAAGAAAACTTTAGCTGATAAGAGGAAGTCCTTGAGTGGCATAGCAAAGAGAAAATCTTTGGGAAAAGTGGTCACTGCCAGGCACAGACCATCCCCCATGAAACAGATCAAGAGAAGAACGTTGGAGGTGGAGCACCGCTGCGACTGCGGCCAGCTGTTCAGCTCCGCCGCGCTGCTGGCGCGACACACCACGCTGGCCCACACTCCGCCGAGGATACGACGCAATAGGTCGCCGCCGCCTGATGAAAAACCCATCAAACCAGCTCCCCGCAAGTCTAACGTCGCCGACAAATCTAAAAAATCTCCGGCTCCAAGAAAGTCTAGCGCGCGAAGCGATAGCAGCACCTCTAAACCGAACAAAAGCGAAGCAAAACCTACGAGGAAAGTTCTTGACAAGGAAACTAAAACTCCGGCCGACACAAGGAAACCCAAACCTGAAAAGTCTGAGGCGAAATCCAGCGTCAAGCCCAGGAGAACGGGCGCTCACCGAGGTGTACCCGTGCCGGAGAAAATGAGGAAACTTATGCAAAAAAATAAATAG
- Protein Sequence
- MDRLSHLRGEAGGSRDSTLDTTSPPSESFMTANESSSKYFSLSEVDSVDSTFDISSIKDVSLASTTTDSEGTMTNADELMNLSPIGKKSDMLDSYKIGKQIEAANILSGGVDIFDDNENSYDGDELVIDDNVDIDDKSSSDLKQSEGLQFKSDENMIESTLINEEMDIASKDTEVVLQIDGKNVDAIDIGNGLYLYRKEGQEELAAVQIIDDDQQQTSFKFLKVRENAEGNLEVYEEIEIEVPKEVPAKEGKTADKKISSHVPIKDINKVISESACNKVAERKNKTPRKEPILTITEVECEGNKETSPDSKSEFNINGKMMKFSESRKSPVIGSFTPMTYHSTPNKEPIPLTKTMVDQQLHPNRHSDNVKKTIEVHTDSCKQRNTETPSKNKEGDDNKTNETIGTEKEIVIDDSVEEVTVAEETDKETIDIKNVDNDKSKPLEPSNDEELNVANDTSDVPMEQENVIDSTEKDINKEKTILKQNIQSKIVNEEDKEEKCENIVNIQENMEDIEIVEIVAESVADKGEEKIENLVEGDSDNLTNLNNIIEISEDEVKISEPINLQVNNKDVKEIEVSVKEIKAIVNDNTHGDSQDVAKVEEIIYDITTDPDTEEIIIIDDSEIDETKIEEKTKDENIKSNVQEDDKVETIIAINNEEESKIEVSVQENNKKNTKSIQADSTSAVTDIEKDDTAPLYDIVKNNQSKIPITKQEMKKETAKPTNDTSVIKPSKPIGAKQEKVELKSEPSEERGALQGVVKDVVLDKSTLQSCSKPEESQKTILKIHKIEVKPETTKLEVLSNETPSLISMVKNKKEINVLKKSPKKESKKAIPIHESQSTAVPMEVDSSTNVKEEIPSKMKVSSDKVPSSEVKEQKPVTQEAFQPSPELKPQRLTKVDEKRGIKTPPKDTITEELSSVKDVQVNKVPYEDLAQPGCSGTQDVSSTSTDSLPIQNNESRNESEDNRDDPDGDEPQPGGSKKEVPFGKWTATNRKEFLYNLKHRTPVPVPPAVPSTSSNQLKSSNDLNKRDVLQKIDSQRQSSSAAALAKTQEANKLNKNETAFTSKTNINLNKDKEDTQEIKVSPKTETDKHTSDTVAEKPTIKEDVTNDIQTEASQVATVTSVMKDSAERTEVNYQDLIDKTIEDMIHRTLVAPKAGQDEPTQTSANDSNVSQSGKYPHTYQPTDQATLDEIEMKMNELHGIPFIERPPHELPVVPLTDPKPKTYSKADKEKLPVPNKTTKIPNLLPFPNKTQQKIIKESVIEVESEDEIIEHEPITGDIDINKKNVAAKLPPKENILLFADTDKPTDAAKKEPIITEKEFDKFARRNSKTYENCLTVNFDINEPHNVFQTLVEKDPHPKSYSRNDIARIDPKAKLPYKYQNVRQTIQPAKIHPPNKLGTTTEDSSNRNQSKLQKAYQSALSAKRQMECPITIIEDKPVKVVFMDNMEFVPNQLNIQGQQLSPAKKLITEPDSFTVSTLDSLESEVLDATDDAKSQEEVKTKSKHQRKQVLTPVDEPELELIEPKDLGLEVSPKKKRKTDEDKNVKYPMRKKYYLLGSNTVADDKFTHTPEVIKNPLKETVNRNDNGVAHKNAVSAIDSLVKAAELLEHQSENMNIIDSPNPDSQQSTPVKRGRGRPRKYPLPEGGVDKNKVPSPQKKPRLIDAKVPKRDNVTTDDDDDDDSDDQIIKENWTMGKINENIVCPICNKLFRTENVVFKHVKHCTGPSPSRSGSDKRSPRRMRPSQESDSKSHGSKSDDMDIDDDKPLVVRKETPKKRKSKDSVSKLNDIDDVLIEDTPPVKEKPEKKEKEIDDRKIHESRKPRAKIFPKSNDLVCEFCGKTFRQLSYLVSHKLQHKKDEPKKTEKDPPVAIKSVYSCEVCKKEFRKLHHLVQHRIIHNPSSAPARFLRKSSSEQSDTKIEKEPGTAKPSEDPGAGFRCEPCDKSFRKLHHLVEHRETHDGINRQKVTPVVQNNVEKPVTLHQCEVCKKTFRKLHHLIEHKEQHVETSSEKSDDKSVKSSLSTRDIIHECSLCYMVFPNEHSLNKHTIICQRKKRQSKQAKPTEETEVIEPVEGASETTKIEEKIENVDSPKPEVEEVKDDEPKKAIIENIELPKDIPKAAEEKPVEVVKEIEKETVQQEVETKPVEPQVVPAKKESVETENVKTEIKPAVPVKIKKVEVKETIKVHETPKRKTSVKEKSAVSASKRLRAAATVTVPHDPKPAVESSDDDEIRYMLNPNFKVEDVTEEKVFMKVRANKRSSLQIERPNSKDLVKRRTSLQHPPKIPRLKPKAVEPNTATVKNIAKAPKSEPAPSTDSDDSETVKYSFPKTIPEKSTKPAQDRTPKDVERKTQKKTLADKRKSLSGIAKRKSLGKVVTARHRPSPMKQIKRRTLEVEHRCDCGQLFSSAALLARHTTLAHTPPRIRRNRSPPPDEKPIKPAPRKSNVADKSKKSPAPRKSSARSDSSTSKPNKSEAKPTRKVLDKETKTPADTRKPKPEKSEAKSSVKPRRTGAHRGVPVPEKMRKLMQKNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -