Tmat011612.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Thalpophila matura
Gene Symbol
SFP1
Assembly
GCA_948465475.1
Location
OX419183.1:18613400-18636562[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.0046 0.31 11.9 3.2 1 23 393 416 393 416 0.96
2 7 0.002 0.14 13.1 1.4 1 23 595 617 595 617 0.98
3 7 0.00013 0.0091 16.7 0.2 2 23 623 644 622 644 0.96
4 7 5.1e-06 0.00035 21.2 0.5 1 23 650 673 650 673 0.93
5 7 4e-07 2.8e-05 24.7 1.4 1 23 679 701 679 701 0.99
6 7 1.4e-05 0.00098 19.8 3.3 1 23 707 729 707 729 0.99
7 7 2.6e-06 0.00018 22.1 3.5 1 23 735 757 735 757 0.98

Sequence Information

Coding Sequence
ATGGATGAAACCGTCACGCACTATATAACGTCCCACACAGCTGACGAGGCAGTTCACGTTGATGGCAATGCTCTGGCTCTCAATGTGCAGGATGACGGAGGTGGCAGGGTGGCCATCATGCATTCACAGACATACTCCACATCACTCTGCAGACAAGTATCAGTCGGTGACCAAGTGGCCGAGGGACAGTGGGGGGAGGAGCTGATGGATCCTGAAGGCAGACTGGCGGCTCTCATGGCGCACATAACGGCACAGTCGAGGGGGCAACCACAGATGCTCCATAAGGTACATGCAGTGAGGGGTGATGTGGACACATCTATTATCCTGGATAGTTCCATGAGGCTCTTCCATGGTCAGCCGATGGATCAGTCACAAGACTCCATAATAGTGGAGGTACCCCAGCTGCCCCCGCTCCCGCCCCTGCAGGATATGAAGCGGTGTCCGGACACAGACTGGTTTAATAACAAGGATAAACCATCTCTCAAAGATGATTCGATGGTTGATTCGGACGGGCCGGTGTTGGAACTGGGCGCGGGCGCGTCGCCGGCGCAGCACAAACACCAGAGCAAGAAGAGTCTGCCGCACAAGAAGAGGATATCAAGGAAGCTCAAGAAGAATAATGGGAACAGTACTCCTCAGCAGGACTTGGTGGTGATCAGTTGCACGGACGTCGAGGGCCGCATCAGCTGCGCGGACCACGGCCAGGAGCAGGAGATCCTGCCCGACAACTTCGTGCAGCAGGACCACCTGCCCGACGACACACATCACATCACGCACGAGGTCCGTCCGATCTACATCTGCCAGCTGTGCGGCGCGTTCTACGGCGAGGAGCAGCTGAAGTTCTACCAGCACCTCAAGCAGCACTACGAGCCTCACATCATCATCGAGAACCCCGTGCCCGACCTGGGGATCGATAAGATGACCAACTCGTGCATCGTAGATAACGTAGCAACAATCCCCGACTCAATAGTAGAGCTTTCTCTAGAGAATTCCATACCGAAAACTATGTACCAATCTATGGACAAGCACGTGCTATACACGACAAGCGATAAAACGTTCACGTACGGTAGCAATAAGGTGCAGTATTCCATGGCGAGTATGGACAAAGAGCCTCAGAGTGTTGTCCATGAAGCCGATAAGGCGGACTTATATGATACTTTGGATGGGCTGGAGTTGTATAGCTGTGGGAAGTGCAGTAAGTCGTTCAGGAAGCAGAAGCAGTGTGAAGCGCACATCAAGGAGGTGCATTCTAATATGAAGCTGGAGGACATGGGCGAGTTCAGTGAGCCGGAGGACCTGATGGAGGGCATCCACGTGGCCGTCGACGAGCCGCCCGACCACTACGAGCTACTGCCGCACCTCACCGTCGAGCACGGCCACGCGCACCAGGGGAGCGTGCGCCACTGGTACGGGCGCGGGGCGGGGTCCCCGGTGGAGGCGGGCGGGTCGCCGGGGGCCGGGGGGGCGCCGGGGGCCGGGGGGGCCGCGGGGGCCGGGGGCGCGGCGGGGGCGGGCGCGGGGGGCGGGGCGGCGTGCTGCGCCGTGTGCGCGGCCGCGCCGCACGACACGCAGCACCTCAAGCTGCTCAAAGAGGAAGTTCTCCGCCGAATCCTGGAAACTGACGTCGCTAACGACAGCCAGAACTTCACCGACAACATGATGTCGGACCCGCCCGACGCCGCGGAGCCGTCCGACACGCCGGACCCGCCGGCCGACTCGCCGGACACGGCCGACGCGGCCGACGCGGCCGACAAGCCGGACGATAAGAAGAAGCCGAAGCGCTTCGAGTGCCCCTCGTGCGCGCGCGTGTTCCAGCACCGCAACAGCCTGCTGTACCACATGCTGTCGCACAGCGGCAAGCAGCAGATGTGCCGCGACTGCGGGAAGGGCTTCTACACCGTCGCCGCGCTCAAGGTGCACAAGCGCGTGCACAACGGCGACCGGCCGTACAAGTGCGACGTGTGCGGCCGCGACTTCCGCCAGTGGAGCGACCTCAAGTACCACAAGGTGTCCATACATTCCGACCAGAAAATGTTCAAATGCGAGTTTTGTGGCAAAGAGTTCGCGCGCAAGTACTCTCTGAACGTGCACCGACGCATACACACCGGCGAGCGCAACTACAAGTGCGACTACTGCAACAAGACCTTCCGCGCCTCCTCCTACCGCCTCAGTCACATGAGGACCCACACCGGCGACCGCCCTCACAAGTGTCCGCAGTGTGACAAGTGTTTCCGCGTGACGGGCGACCTGCGCCGCCACATGCTCATACACGACCGCGTGCGCAACCGGCTTAACGAGCAAAAGACTAAGCTGAAAGACCAGAAAGAGCCAAAAAAACTCGACAAGAACGACGACAAACAAGACGACAAACAACGCCCCAACGTCAAGCTCGAAATCACAAAACACATCGAGAAAATCGCAGCCACCACTAAAGCTACCACAATCATCAGATCCACTGAGAAGAAATCTAAACCTAAAAAAAACCAAAGTAAGAAAGGAGCTCCCAACGTGACCATAGACCAGCTAGACAACAGCTACACTAACGTGGAAGTGTTCGACACGCGGCAAGACGGACACTACGGCAAACTCGGCGTAGTGTCAACTAAAGAGGCGTACGACTGCGGGTACGCCAAAGAAGACCTAGACAACCCGTTCACCAAAGTAGGATACAAAAACGAACAAACACAAGAAAGGGATTTCGCGATACTGCGGCCGATGTTCAGGAACAACGTGTTGTGTGACCCTGTGGACGCCGAACATACGGTGTTTAGAACTGAGAACACTGATGGGAAAATGCAAGTGTACACACACATAGAGAAAGGGAATACTATCGTTCCCAACTCGCAAGTATCGCTCAACGATATGCGACATCTCGAGAGGGAGGTCAGGAGTGACATACACGGGGAAACCATAGAGAACGGCTTCATAGAGCGACTGACAGCTCTGTACAATATACCTGCCGTATGA
Protein Sequence
MDETVTHYITSHTADEAVHVDGNALALNVQDDGGGRVAIMHSQTYSTSLCRQVSVGDQVAEGQWGEELMDPEGRLAALMAHITAQSRGQPQMLHKVHAVRGDVDTSIILDSSMRLFHGQPMDQSQDSIIVEVPQLPPLPPLQDMKRCPDTDWFNNKDKPSLKDDSMVDSDGPVLELGAGASPAQHKHQSKKSLPHKKRISRKLKKNNGNSTPQQDLVVISCTDVEGRISCADHGQEQEILPDNFVQQDHLPDDTHHITHEVRPIYICQLCGAFYGEEQLKFYQHLKQHYEPHIIIENPVPDLGIDKMTNSCIVDNVATIPDSIVELSLENSIPKTMYQSMDKHVLYTTSDKTFTYGSNKVQYSMASMDKEPQSVVHEADKADLYDTLDGLELYSCGKCSKSFRKQKQCEAHIKEVHSNMKLEDMGEFSEPEDLMEGIHVAVDEPPDHYELLPHLTVEHGHAHQGSVRHWYGRGAGSPVEAGGSPGAGGAPGAGGAAGAGGAAGAGAGGGAACCAVCAAAPHDTQHLKLLKEEVLRRILETDVANDSQNFTDNMMSDPPDAAEPSDTPDPPADSPDTADAADAADKPDDKKKPKRFECPSCARVFQHRNSLLYHMLSHSGKQQMCRDCGKGFYTVAALKVHKRVHNGDRPYKCDVCGRDFRQWSDLKYHKVSIHSDQKMFKCEFCGKEFARKYSLNVHRRIHTGERNYKCDYCNKTFRASSYRLSHMRTHTGDRPHKCPQCDKCFRVTGDLRRHMLIHDRVRNRLNEQKTKLKDQKEPKKLDKNDDKQDDKQRPNVKLEITKHIEKIAATTKATTIIRSTEKKSKPKKNQSKKGAPNVTIDQLDNSYTNVEVFDTRQDGHYGKLGVVSTKEAYDCGYAKEDLDNPFTKVGYKNEQTQERDFAILRPMFRNNVLCDPVDAEHTVFRTENTDGKMQVYTHIEKGNTIVPNSQVSLNDMRHLEREVRSDIHGETIENGFIERLTALYNIPAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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