Basic Information

Insect: Thalpophila matura
Gene Symbol: -
Assembly: GCA_948465475.1
Location: OX419189.1:14070534-14077386[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.89 61 4.7 0.1 3 23 114 134 112 134 0.95

2 18 0.0016 0.11 13.4 0.5 2 23 138 160 137 160 0.96

3 18 0.0014 0.093 13.6 1.0 2 23 390 412 389 412 0.95

4 18 0.018 1.3 10.0 0.1 1 21 420 440 420 441 0.95

5 18 0.0077 0.53 11.2 0.3 2 23 451 472 450 472 0.94

6 18 8.4 5.7e+02 1.6 1.5 1 23 488 511 488 511 0.84

7 18 0.058 4 8.4 1.6 1 23 520 543 520 543 0.94

8 18 9.4 6.5e+02 1.5 1.3 8 23 593 609 585 609 0.88

9 18 0.83 57 4.8 0.3 3 23 621 642 620 642 0.84

10 18 5.2e-05 0.0036 18.0 1.8 1 23 676 698 676 698 0.96

11 18 3e-05 0.002 18.8 1.3 1 23 705 727 705 727 0.98

12 18 8.8e-05 0.0061 17.3 2.3 1 23 732 754 732 754 0.96

13 18 0.00025 0.017 15.9 2.1 1 23 760 782 760 782 0.98

14 18 4.9e-07 3.4e-05 24.4 1.9 1 23 788 810 788 810 0.98

15 18 0.00057 0.039 14.7 2.6 2 23 817 838 817 838 0.98

16 18 0.00079 0.054 14.3 0.5 2 23 846 868 845 868 0.97

17 18 4.8e-05 0.0033 18.1 0.5 1 23 873 895 873 895 0.97

18 18 0.0022 0.15 12.9 1.6 2 23 902 924 901 924 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.89	61	4.7	0.1	3	23	114	134	112	134	0.95
2	18	0.0016	0.11	13.4	0.5	2	23	138	160	137	160	0.96
3	18	0.0014	0.093	13.6	1.0	2	23	390	412	389	412	0.95
4	18	0.018	1.3	10.0	0.1	1	21	420	440	420	441	0.95
5	18	0.0077	0.53	11.2	0.3	2	23	451	472	450	472	0.94
6	18	8.4	5.7e+02	1.6	1.5	1	23	488	511	488	511	0.84
7	18	0.058	4	8.4	1.6	1	23	520	543	520	543	0.94
8	18	9.4	6.5e+02	1.5	1.3	8	23	593	609	585	609	0.88
9	18	0.83	57	4.8	0.3	3	23	621	642	620	642	0.84
10	18	5.2e-05	0.0036	18.0	1.8	1	23	676	698	676	698	0.96
11	18	3e-05	0.002	18.8	1.3	1	23	705	727	705	727	0.98
12	18	8.8e-05	0.0061	17.3	2.3	1	23	732	754	732	754	0.96
13	18	0.00025	0.017	15.9	2.1	1	23	760	782	760	782	0.98
14	18	4.9e-07	3.4e-05	24.4	1.9	1	23	788	810	788	810	0.98
15	18	0.00057	0.039	14.7	2.6	2	23	817	838	817	838	0.98
16	18	0.00079	0.054	14.3	0.5	2	23	846	868	845	868	0.97
17	18	4.8e-05	0.0033	18.1	0.5	1	23	873	895	873	895	0.97
18	18	0.0022	0.15	12.9	1.6	2	23	902	924	901	924	0.96

Sequence Information

Coding Sequence: ATGACTTCGGAAGAGTCGGATGATGAACCGCTATCCGTCATAGCGGCAAATAAGAAATTTGATCCAAAACAACATGAGGAGGGAACATCAGATACTTGGGAAGTTCCAAATAAGAAGAGAAAGAAATTACCGCCACCTAAACGGCTTTCGATCACTATAAAGCTTCAACGTAAGAAGACTGCTCAGGACCCGCCAGTAATTGAGCGGCCTGCAGACGTGTGGCTCTACCTAAAAGATCTTAATCCCTCGGGGCCCTACAGTTGCTTACTTTGCCCAGATTGGTTCATAAACAGATCCAAAATGATTGTTCACTATGTCCTAAATCATAAGAAAGACTTCTGCGGTATTTGTAGATACTTTGTACCTGATAGAGATTCTTGGTGGAATCATGTGAAGTTTCATACTCCTTGGCCCTGCTCCCAATGTGCTCAAAACTTTGAAACAGAAGAAGATCTCCGGCACCACCTCAAGACTATCCACAATCTTGTACATTGTAGACTGTGCCATTTCCGTGTTCTTGATGGAGATGCATACCACTCACATTTGTTTGAAAAACACAATGTCTCCAATGTGTCAGCTAAAGATGATGAAAACTTTTGGGAACTAGAATATGATGGTACCTCCAATTTTTTGTGTTTACTCTGTTCTAAGACTAATAACTCAACCAGAACATTCTTCAACCATTACATGGGCTACCACCATTTCACCCTCAAATGCTTCACTGCTCTTGTGTCAGGAAGAGATCCACCATTCTCAGTATATGGTGCTGAAGTCAGAACAGAATTTGTTGAAGAACAATTGAAACAACATGCAAGATTGGGTTATGTTGATCCTGAATTCAAGCCTAGTGACTGTGCTATAGAAGCTGATCAAAGTAATACTAAAGATTTGCTAAAAGTTCTTATACCAGAAATTAAACAAGAAGTACTAATGGCTGATGAAGCTAAAAATGATGACGAAGCTGCAAAGATTAAGGATGATGATTATATTTATAAAAACTATAATGGTGATGATGACTTTGATGTAACTTCAATGGAAGTGATAGTTGTACAGAAATGTTACTACGATTATATTACTGATATATTATCGGACATCAACGCTCGCTTGTTTTATGAATACTCAGACGTCGATTATGAAAAGCTTACAACTGATGTAACAATGGACATAGTTTGCACACTATGCAGTGTCCGATACAGTACATTGTCCAATTTTACCACTCACATGTTCAAAATGCACTGTATAAAGTCCTTACCAATATTTTCATGCAGAGTATGTGCAACTACTTTCGAAACTCAAAATGAGCTTGACAATCATATAATGAATGAGCTGGCTGACTTTGATGATCTGTGGATATGCCAATTTTGTGATAAAGAATTTGATGACAGGGAGGCAACAAGACGGCATTTAACGGAACATTGGAATCTAGTAGAATATGATAATTGTTTTAGTCCTCATTTAGGTTTCAAATGCCGGTACTGCCCAACACTGTTTTGGCATGAGACGGACAGAGAAACTCATCAGGTCCGAGCACATTTCTTTAATCATAAAGAGGCTTACTACAAGTGTGAGAGTTGCAATGACGTGTTCAGTGATAAGATCTGGTTTATCCATCACTACTTGGAAAAACACAGCTCCCCTGAAAAAATCCCACTGTACCTGCTAAAGTGTTCTCTCTGCTGCATAGTGCTGCCAACTGTTGAGGATATGAGGGGTCACTTCAACTCTGACCACCCTGAAGCCAGGAAGGTGTTCTGTTCCTTAGACTCCTGCCAATATAAGCCATTGAGCCACAGAAAGTCTTTCAAGCTACATGTGCGGACCATGCACACATCTCGTTCGCGTCCGGAGCGCTCAGTGGATTGTTCCGTGTGTGGTCGAGAGTTCGGCAGTTCGCGGGCATGTGGCGCGCATATGGCGCAGGCGCATGGGCCTGGCAAGTTCAAGTGCAAGCTTTGCAGGGAGATACTGCACACTATGGATGAGAGGAAACTCCACTACCTAATCAGTCACCCCGGACAGCATCCGTTTGAATGTTCAGAGTGTGGCAAATCATTCCAGTACAAATCATCTCTGTACATGCACAAGCAAGACCATGTGCCCAACAAGCAGAATTACACCTGTACTTACTGCGGAAAGATATTTATGAAACGCGATTCGTTCCGTGAGCACGTCCAGATCCACGAGGGCCCGCGGCACGCGTGCTCCTACTGCCCCATGCGCTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGCCGCCACACCGGCGAGCGGCCCTACGCCTGCCCGCACTGCCCCCGGAGCTTCGCTGACAAGGGGGCCTGCAACTCACATACCAGGACCCATTTGAAGAATACGTCGTACGCGTGTATGTACTGCGGCAAGACGTTTGTGCAAAAATCGAAGCTGACTTATCACATCAGAAAACATACTGGAGAGAACCTAGAGACTTGCACGGTGTGTTCCAAGCTGTTCACGAGCGCCTGCTCGCTGCGGGAACACATGAAGATACACGAACCCAAGAAGCAGTTAGTCAAATGTCCGCTGTGTGACCGCATGTACCAAGACGAGCGCTATATGCTGCGTCACTTGCGAACCACGCACACCCGCGCGAGACACCCCTGTCCCATCTGCAACAAGACGCTGACCAGCGCGGCCGGCCTGCGACACCACGTCATCACTCACAGCTCGCTCAAGACGATCAGGTGCAAAATGTGTCCAAAAGCATACTCCGTGAAAAGAACAATGATCAAACATTTCCGGCGTCGACACGGCTTCAAGGGTACTGAGCCGAACATGAAAGAGTTCTACACTCGGCTGGACCCGAGAGAGTGCAACCTGGGCCTCGACGAACCAATCATGACCAGCATATTCGGACCTCCCAAGAAACAGATGGACGAACTCCTAGTGGGAGATTACGTCACCCTAAGCAATTTGGGACAGCAGAAAAGACTAGAAGAACAAAGGGAAGCGAGTGTGACCACAGAAGATACACAAAATGAGAAGTCTCAGTCGGACGATGAACAATCAAGAGAGAGTGAAAAGGACACAGATAGCGCTGAAAGAGAGGAGAAGATGATTAATATCAAAATTGAAGCTAAAGAAGAGTGTGAAAATAATGAAACGGAGTTGGAACCTACCGATTTTGTTAGCGTTAAAATTGAACCAATGGATGATGAGAATAACGGGGATCACTAG
Protein Sequence: MTSEESDDEPLSVIAANKKFDPKQHEEGTSDTWEVPNKKRKKLPPPKRLSITIKLQRKKTAQDPPVIERPADVWLYLKDLNPSGPYSCLLCPDWFINRSKMIVHYVLNHKKDFCGICRYFVPDRDSWWNHVKFHTPWPCSQCAQNFETEEDLRHHLKTIHNLVHCRLCHFRVLDGDAYHSHLFEKHNVSNVSAKDDENFWELEYDGTSNFLCLLCSKTNNSTRTFFNHYMGYHHFTLKCFTALVSGRDPPFSVYGAEVRTEFVEEQLKQHARLGYVDPEFKPSDCAIEADQSNTKDLLKVLIPEIKQEVLMADEAKNDDEAAKIKDDDYIYKNYNGDDDFDVTSMEVIVVQKCYYDYITDILSDINARLFYEYSDVDYEKLTTDVTMDIVCTLCSVRYSTLSNFTTHMFKMHCIKSLPIFSCRVCATTFETQNELDNHIMNELADFDDLWICQFCDKEFDDREATRRHLTEHWNLVEYDNCFSPHLGFKCRYCPTLFWHETDRETHQVRAHFFNHKEAYYKCESCNDVFSDKIWFIHHYLEKHSSPEKIPLYLLKCSLCCIVLPTVEDMRGHFNSDHPEARKVFCSLDSCQYKPLSHRKSFKLHVRTMHTSRSRPERSVDCSVCGREFGSSRACGAHMAQAHGPGKFKCKLCREILHTMDERKLHYLISHPGQHPFECSECGKSFQYKSSLYMHKQDHVPNKQNYTCTYCGKIFMKRDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCPRSFADKGACNSHTRTHLKNTSYACMYCGKTFVQKSKLTYHIRKHTGENLETCTVCSKLFTSACSLREHMKIHEPKKQLVKCPLCDRMYQDERYMLRHLRTTHTRARHPCPICNKTLTSAAGLRHHVITHSSLKTIRCKMCPKAYSVKRTMIKHFRRRHGFKGTEPNMKEFYTRLDPRECNLGLDEPIMTSIFGPPKKQMDELLVGDYVTLSNLGQQKRLEEQREASVTTEDTQNEKSQSDDEQSRESEKDTDSAEREEKMINIKIEAKEECENNETELEPTDFVSVKIEPMDDENNGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00758517;
90% Identity: -
80% Identity: -