Basic Information

Insect: Thalpophila matura
Gene Symbol: -
Assembly: GCA_948465475.1
Location: OX419206.1:5912594-5914930[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.011 9.7 6.6 2.6 18 43 9 31 6 32 0.94

2 19 0.075 63 4.0 0.3 17 44 36 60 32 60 0.80

3 19 0.00038 0.32 11.4 0.0 18 43 68 90 65 91 0.94

4 19 4.6e-05 0.039 14.3 1.6 17 44 98 122 95 122 0.91

5 19 0.0011 0.94 9.9 0.5 18 44 129 152 127 152 0.94

6 19 5.7e-05 0.048 14.0 1.2 15 43 157 182 153 183 0.89

7 19 0.0032 2.7 8.4 0.3 17 44 188 212 184 212 0.89

8 19 0.0041 3.5 8.1 0.7 17 43 219 242 213 243 0.84

9 19 3.1 2.7e+03 -1.2 0.0 35 44 269 278 246 278 0.74

10 19 9.9 8.4e+03 -2.8 1.7 16 40 301 322 284 326 0.61

11 19 4.6 3.9e+03 -1.7 0.2 18 29 333 344 328 355 0.74

12 19 0.28 2.4e+02 2.2 0.7 15 27 359 371 340 385 0.85

13 19 0.067 57 4.2 3.7 16 43 405 429 398 430 0.87

14 19 0.0035 3 8.3 2.9 15 43 462 487 452 488 0.79

15 19 0.071 60 4.1 0.8 17 44 493 517 489 517 0.85

16 19 0.53 4.5e+02 1.3 0.8 18 28 524 534 520 547 0.82

17 19 1.7 1.4e+03 -0.3 0.7 19 43 555 576 550 577 0.75

18 19 0.00017 0.14 12.5 2.5 6 43 606 642 605 643 0.79

19 19 1.7 1.4e+03 -0.3 0.3 15 40 660 687 652 697 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.011	9.7	6.6	2.6	18	43	9	31	6	32	0.94
2	19	0.075	63	4.0	0.3	17	44	36	60	32	60	0.80
3	19	0.00038	0.32	11.4	0.0	18	43	68	90	65	91	0.94
4	19	4.6e-05	0.039	14.3	1.6	17	44	98	122	95	122	0.91
5	19	0.0011	0.94	9.9	0.5	18	44	129	152	127	152	0.94
6	19	5.7e-05	0.048	14.0	1.2	15	43	157	182	153	183	0.89
7	19	0.0032	2.7	8.4	0.3	17	44	188	212	184	212	0.89
8	19	0.0041	3.5	8.1	0.7	17	43	219	242	213	243	0.84
9	19	3.1	2.7e+03	-1.2	0.0	35	44	269	278	246	278	0.74
10	19	9.9	8.4e+03	-2.8	1.7	16	40	301	322	284	326	0.61
11	19	4.6	3.9e+03	-1.7	0.2	18	29	333	344	328	355	0.74
12	19	0.28	2.4e+02	2.2	0.7	15	27	359	371	340	385	0.85
13	19	0.067	57	4.2	3.7	16	43	405	429	398	430	0.87
14	19	0.0035	3	8.3	2.9	15	43	462	487	452	488	0.79
15	19	0.071	60	4.1	0.8	17	44	493	517	489	517	0.85
16	19	0.53	4.5e+02	1.3	0.8	18	28	524	534	520	547	0.82
17	19	1.7	1.4e+03	-0.3	0.7	19	43	555	576	550	577	0.75
18	19	0.00017	0.14	12.5	2.5	6	43	606	642	605	643	0.79
19	19	1.7	1.4e+03	-0.3	0.3	15	40	660	687	652	697	0.85

Sequence Information

Coding Sequence: ATGTATCAAAACCAACTTGATTTCGTTTGCGACTACTGTTCAAGAACTTTTACCAGAAAATACAATTTACAAACTCATATAGAAAACTGTCATATCAACTCATCGTGTCACTGTGACATTTGTGGCCAGAATTTCGGCAGTCCGGCCGGCTTGCTGCAACATTTATCAAGAGGACACAATAACTATGGTCAGCCGTTTCCAGAATGCGAGCTATGCGGTCGAATATTCACTAGAAAACAGAACATCATGTCACATATGATCACAGTACATTTACAAGGACTTGGCTACGAAATTCGGTGTCGATTATGCGAGAAAACCTTCACTACAGAACGGAATTTGAAAAGGCACATGAATCAGTTACATAATCCTGATGTTGAATACCCTACATGTAACGATTGTCGCAAGGTCTTCAAAGGAAAACACTCTTTAATCGCTCATATTCAGTCTGTACATAATGTCAGCGAGAAAGATGCTATCAAATGTCATTTGTGTGAAAAAGTTTATACGAACAACAGAAACCTAAAAAGGCATATTGAAATGTTTCATGGCGAGAAGGGAGAGTTTAGGTGCGACATATGCCCTAAAGTGTACACATCGAATCAGAGCTTAAGACGCCATGCAAGAACGCGACACAGCACTGAAAATCAGGAACATTTAACATGTAACTTTTGCATGAAGGTTATCATCGGGAGAGAGAATTTCGACAGCCACATACAATTCCACCACCAAGACATCGAAATTGATGCCAAAAACGCCGAATTTGTCTGCGATTCTTGCAACCAGAGCTTCGAAGAAGAGCCTTATTTACGTCAACATGTAAAATCTGAGCATTCATTCAAAACTTTCTACAAGTACTGCAAGAAATCGTTACTCAAACAGTACGGGATGGACACACACCACATATACAACTGTGAGTTTTGTGACAATTCGTTTTTAACTGTATATGAACTGAAAGATCATATGCGCGTCAGCCATGATACGGAATACTCTCTTTCTACTTGCAATGTGTGTTTCAATAAGTTTTTCAGTAAAGAAACGATGTCTGCACACAAAAACGTATGTCTCCAACCTCCAAACGTGAACACTTGTAGCCACTGCGATAAACTGTTCACTGATATTTCAAGTCTAGAATTTCATACCAGAATCTTTCACCCACAAGCCCAAATCGCCGATTCTAATATAACATCCACGAACATAGATGATGAATCTGTTTCCTTTAAATGTGAGCACTGCGATCGAATTTATTACAGCGACAGATCTTTAAAGCATCATATAAAGCTAAAACACACGACTGATGAGGAAGTAGAGTGTGAATCTTGCGGCAAAATTTGCAGTAACAAGTATTATCTAGCTTCGCATACTAAAATCGTTCACAGCAACGATTCTTGGTCCAGATGTGAATACTGCGACAAGCAATTCAAATCTAAAAGAAATATTCGCAGACATATTGAATACACTCATTTGGGCATGCAGAGATACAAATGTATTGAGTGCGAGACTTTGTTTAAGGAGAAACGGAGTTTAAGGAAGCATGTTAGAACGAAACATCCGAACTCGGCCGCTTTCCCGCAGTGCCATATCTGTCATAAAAGATTTGAATCGGCGAAATCATGTAAAATACATCTGAAATTGTTGCATTCATTCAATATGAACACGTATCCATGTCATCTATGTTCCGTATCTTTCAGCTCAAACGAGGCTTTAACAATACATTTACAGACAAAACACTTAGCAGAAGACGAAATCTACAAATGCGAGGAGTGTAATTTAGTTTTCAAAGGGCAGGAAAAGTTTGACAGTCACAACGATGTCTGCCACGTGAATTTAGTGCCGAATATAAAACAAAAAGTTCTGCCGAGATGCATTCTTTGCATGAAAGATTTTAGCACTAGAAAAACGTTGAAACGACATATCAAGAAATTCCACGAAGACTTCGATGTGGATGAGTTAGCAACGTTTGGTTCTAGACGACGAACGTTCACAGTGGATTGTGAGGATTGCATCAAAAAATTCAACGACGATTTCTATTCTAACATCTACAACAAACTGAAACATTTGAAAGATTCTGTGATTTTCAAATGCGACGCTTGTTTTGAGGCGTACAATTCTTTGGAGTTCGCGATACAGAGATATAAAGTCACTAACGCAGATGCTTGTAAAAGCAAGATGATTTTAAGCGAGCTATGTACGGCTGAGATGAGTGAAGAAGAGAATGACTTCTCAAACTTTGGCGCTTTGCATGATATGTTGCCTGAAAGCACGACGGGTGATATAAAGCTAGAAGTATTTGAAGAAATGTCGGAGTCTGATATTAAGATGGAGCCACCTTCACCATAA
Protein Sequence: MYQNQLDFVCDYCSRTFTRKYNLQTHIENCHINSSCHCDICGQNFGSPAGLLQHLSRGHNNYGQPFPECELCGRIFTRKQNIMSHMITVHLQGLGYEIRCRLCEKTFTTERNLKRHMNQLHNPDVEYPTCNDCRKVFKGKHSLIAHIQSVHNVSEKDAIKCHLCEKVYTNNRNLKRHIEMFHGEKGEFRCDICPKVYTSNQSLRRHARTRHSTENQEHLTCNFCMKVIIGRENFDSHIQFHHQDIEIDAKNAEFVCDSCNQSFEEEPYLRQHVKSEHSFKTFYKYCKKSLLKQYGMDTHHIYNCEFCDNSFLTVYELKDHMRVSHDTEYSLSTCNVCFNKFFSKETMSAHKNVCLQPPNVNTCSHCDKLFTDISSLEFHTRIFHPQAQIADSNITSTNIDDESVSFKCEHCDRIYYSDRSLKHHIKLKHTTDEEVECESCGKICSNKYYLASHTKIVHSNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALTIHLQTKHLAEDEIYKCEECNLVFKGQEKFDSHNDVCHVNLVPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFHEDFDVDELATFGSRRRTFTVDCEDCIKKFNDDFYSNIYNKLKHLKDSVIFKCDACFEAYNSLEFAIQRYKVTNADACKSKMILSELCTAEMSEEENDFSNFGALHDMLPESTTGDIKLEVFEEMSESDIKMEPPSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00447464;
90% Identity: iTF_00072251;
80% Identity: iTF_01425314;