Tmat002915.1
Basic Information
- Insect
- Thalpophila matura
- Gene Symbol
- clz9
- Assembly
- GCA_948465475.1
- Location
- OX419181.1:1865916-1868870[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-09 1.7e-06 28.0 0.1 4 40 18 55 15 59 0.87 2 2 2.5 1.1e+03 -0.2 0.1 25 40 891 907 889 910 0.81
Sequence Information
- Coding Sequence
- ATGGTTAGCAattacaaaagaaaaacaaataaaggatcatattcaaagcaaaaattactcgaggcagcacaagctgttagagatggccacctaagtggttataaagctgcacaaatttataatatccctcgcatgaccattatggatcatgcgaaaaacagaagatttaaatcaaattctcttggcagaagcactgcactgactttggaagttgaaacaaaattagcttcgttactacattcaatggaaaaatatggttttggcttgacaaaaaaagaggtcctagaaatggttagccactatgtaaaccgtaatctcatatcgacgcctttcaaaaacggaattccaggtcaggcatggtttactgcgttcaaaaaacgacaccatttatcaatgaaaaaaccccaggctgtggaatacgcgcgtaagaaagccatagacccatttatagtttacccatattttgaattgctgaaaaatacattaaataatttaaatttgttggacaaaccatctgccatttggaacttagacgaaactagtttttcgaatgatcctgaaaaatcaaaaattgttggcgcaaaaggatacgccgcgacaagaataatttcttcgcctggtagagaaaacactactgtattgcttggcgccagtgcgctaggagaaaaaacacctccactaattatttttaaaggtaaaaacgtctgggatgaatggacatcaccagatgcttatcccggcacatcctacgctgccacgaagaaaggatggatggagacagacgtctttgaaatgtactttaaaaaagtattcttgccagctgttggaaaccaacgtccaattcttcttatttatgatggacactctactcatgtaggattagacataatcgaagaagcacgtaaagcagatataacaatactaaagctacctccgcatactagtcatgttttacaaccgctagatgtagcggttatgaaatcgtttaaagatcggtgggatccaatgctcgtaaaatggcagcgttctaatgtcggagtgaaacttccaaagaaagagttcgcaagattaattggagtagtttgggctcaaattgatagtcaagttttaagaaatggcttccgcaaggctggaatttacccgtATAATTCTGAAGAAATCAAAGAAAGTCTATTTGATCCGTTAAAATTAAGGCATTGGAAAGAAATCCAAGTTAATGAGTCCCAAGAAAAAGAAAGACATGAATATGACCTCAATATTCCAGAAAGACTGGCTTGTTATAATGATGAATCTTTATACGTTGGTACAACAAACGAGCCACAAAGTCTGCTTTCATTAGCTCTCAATTCCATCATAAAAGTAGTTGGTGTAAATTCAAATCAGGGCAGTAGCAATCAGCACTGTTCTACTAATTGTAAAACTGACAACCGTATTCAGAATAATAATTGGGAGAAAAATGATGCCAAAAGTTTAATAAAAAACCAATTTCTAGGAAAAGAATCTCATCAAAGGCTGGAACAAGAATCTTTTGTATCAAATAATATTTTGAAACGAGTTGACAGTAGCAGTAATAAAATACAGATATTAGAAAACAGACTTTTGACGACCGACCGACTAACCTTTGACGAACTACTTTTGATGCAAATTAAACCTGGAGCTAACGTCAAAGCTAAACGACAAAAAATAGCCCCAGGTGCTGAAGTTATAACACATGATGATGTTGTTAGGCGTTTAATGGAAAGAAAAATAAAAAATATAAAAAAAGAACCACAAACATTTAAAAATGTGACTATGGTTAAAAAACAACCAAAGACCAACAACCTAAACAAAAAAAAACAAAAGAAAACACCAAAAGTACCATCCAACGAAACTACACCTGACATTACGAGTGACTATGAGGCAGATATGACACCATTGCATGATACTTCCTTTTATGGTCCATCTACTTCAACAGGAAAGACAGGTATAAAAAGAAATACGAAAAGAAAGCGCCTGACATCAAATGACTCTAATACTAGTATTTCTGATGTGATTAGTCTATATAGCGACACAGATATCAGCGTTAGAACACTGTGTGACGATGACTTCGATAGTGAAGTGAATTGTATTGCAGAAAATAACATTGTGTATCAAGAAAATTCTAGTTACAGTGACATCTTAGAACTTAACGTAAAAGGTAAACAACATAAAATTGCTCCAAAAAATATAATAAAAGAACCGCAAACGAAGAATAATACGATTATGAGAAAAAATCAACCAAAGATGACTAACCTAAACAAAAAAGGAAAAAAGAAAACACAAAAAAAAACATCTTCCAATGAAACGACACCTGACGTTAGAAGTGACGACGATTTTATCACCACGTTAAGTGATCCTAAAAGTGAAAAAGAAAATTCGGTTCCTCATGCAGACACGACATTAAAAGGAGATTCTTCACGTTCTCGTCCAACTACTTTAACAGGAAAGAGGGGTATGAAAAGAAATATAAAACGAAACCACCTGTCACCAATTGACTCCACATCTATTGTTTCTGATAAAATGAATATATTTAGTGACATGAACATCAGGCCTTTAAACGACGATAACTTCGATACTGATGGCAATTGTACCGCAAGAGACGACATTGTGAATCAAGAAAATTCTAGTGACAATAACATCTTACAGCAGCACACTTACAGCATAAATGATTCCGTGCTTGTGAGATACCATATGAGACAAAAGTGGAGCTATTACATTGGATTCATAGAAAATATCAAAGTAGTGGGTGAAGAAACATACTATTCTATAGATTTTTTAAAAACTGTAAGGAAACCACAACTAGTTTTTAGAATGACTAAGAGAAAAGACCGAGATAATGTACCCGAACTGTCTATAGTTAAAAAGATAGAAGTAGAAACTGTTAATGTAAAACAATATTACTTATCTAATATTGAAGATGAGGTATATTTTAAATAA
- Protein Sequence
- MVSNYKRKTNKGSYSKQKLLEAAQAVRDGHLSGYKAAQIYNIPRMTIMDHAKNRRFKSNSLGRSTALTLEVETKLASLLHSMEKYGFGLTKKEVLEMVSHYVNRNLISTPFKNGIPGQAWFTAFKKRHHLSMKKPQAVEYARKKAIDPFIVYPYFELLKNTLNNLNLLDKPSAIWNLDETSFSNDPEKSKIVGAKGYAATRIISSPGRENTTVLLGASALGEKTPPLIIFKGKNVWDEWTSPDAYPGTSYAATKKGWMETDVFEMYFKKVFLPAVGNQRPILLIYDGHSTHVGLDIIEEARKADITILKLPPHTSHVLQPLDVAVMKSFKDRWDPMLVKWQRSNVGVKLPKKEFARLIGVVWAQIDSQVLRNGFRKAGIYPYNSEEIKESLFDPLKLRHWKEIQVNESQEKERHEYDLNIPERLACYNDESLYVGTTNEPQSLLSLALNSIIKVVGVNSNQGSSNQHCSTNCKTDNRIQNNNWEKNDAKSLIKNQFLGKESHQRLEQESFVSNNILKRVDSSSNKIQILENRLLTTDRLTFDELLLMQIKPGANVKAKRQKIAPGAEVITHDDVVRRLMERKIKNIKKEPQTFKNVTMVKKQPKTNNLNKKKQKKTPKVPSNETTPDITSDYEADMTPLHDTSFYGPSTSTGKTGIKRNTKRKRLTSNDSNTSISDVISLYSDTDISVRTLCDDDFDSEVNCIAENNIVYQENSSYSDILELNVKGKQHKIAPKNIIKEPQTKNNTIMRKNQPKMTNLNKKGKKKTQKKTSSNETTPDVRSDDDFITTLSDPKSEKENSVPHADTTLKGDSSRSRPTTLTGKRGMKRNIKRNHLSPIDSTSIVSDKMNIFSDMNIRPLNDDNFDTDGNCTARDDIVNQENSSDNNILQQHTYSINDSVLVRYHMRQKWSYYIGFIENIKVVGEETYYSIDFLKTVRKPQLVFRMTKRKDRDNVPELSIVKKIEVETVNVKQYYLSNIEDEVYFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -