Tdiv006870.1
Basic Information
- Insect
- Tetrapedia diversipes
- Gene Symbol
- -
- Assembly
- GCA_033822845.1
- Location
- JAOPTO010000741.1:177751-185899[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.12 15 6.9 0.1 3 20 107 124 106 126 0.94 2 22 0.012 1.5 10.1 0.2 1 21 131 151 131 152 0.95 3 22 10 1.3e+03 0.9 7.0 3 23 164 185 162 185 0.91 4 22 0.0014 0.18 13.0 2.8 1 23 584 607 584 607 0.97 5 22 3.8 4.9e+02 2.2 0.5 5 23 614 633 613 633 0.92 6 22 0.036 4.7 8.6 3.0 2 23 640 661 640 661 0.96 7 22 1.4 1.8e+02 3.6 1.5 1 10 687 696 687 707 0.84 8 22 0.02 2.6 9.4 1.8 1 20 840 859 840 861 0.92 9 22 1.9e-05 0.0024 18.9 0.4 2 23 869 891 868 891 0.94 10 22 0.032 4.1 8.7 3.3 1 23 901 924 901 924 0.95 11 22 3 3.8e+02 2.6 0.4 3 19 945 961 944 964 0.92 12 22 0.69 89 4.5 5.7 1 23 971 994 971 994 0.94 13 22 0.27 35 5.8 8.6 1 23 1005 1028 1005 1028 0.91 14 22 0.00031 0.039 15.1 0.1 1 20 1065 1084 1065 1086 0.95 15 22 0.0045 0.58 11.4 1.2 1 23 1093 1116 1093 1116 0.94 16 22 0.043 5.6 8.3 0.4 2 20 1192 1210 1191 1212 0.92 17 22 0.0006 0.078 14.2 1.4 1 23 1219 1241 1219 1241 0.98 18 22 0.001 0.13 13.5 1.9 1 23 1251 1274 1251 1274 0.93 19 22 0.00098 0.13 13.5 0.3 2 21 1313 1332 1312 1333 0.93 20 22 0.037 4.8 8.5 2.9 1 23 1340 1362 1340 1362 0.98 21 22 0.022 2.9 9.2 3.6 1 23 1372 1395 1372 1395 0.94 22 22 0.084 11 7.4 2.0 3 23 1510 1530 1509 1530 0.97
Sequence Information
- Coding Sequence
- ATGGCTCGATCCGTTGTATATGTACGTTCTGTAAATGCAGTCTTTACAGATGTACAGTTGGATGAATATTCAAAtCGTTTTAAATATGGATTAAAAATCAAGAAAGAACCAATGGACGAGTCTGACGTTACATTGTCTGTTGATACAAATGTAAGAGACGAGGACGAGACCATAGGGTCTGAAGATAAACATACAAATGGCAGTAATAGAGCTGAAGTACCTGTGCTGCCACAAGAATCTGTTAACTCAGGAAACGGCAACCACAacaatagaaaaagaaaacgtgcGACCGGTGGTTTAAGACATAAACATCCACTATGCACCGTCTGTTTCGTGCCCTTCAAAAATCGGAATGCATTAAAAATGCATACCATAATATACAGTAAATCGTTTAAATGCCAGAGATGCAATATAGTGTTTAATGGAGAGTATTTATGGAGACGGCATTTGATGATGGGCTGCGACCTAAAAGTATCTTCAGGACTTGCTTGTtacatttgtaataaaaattgctacgATAAAAAAACCGTACAATCTCATTTGTTCCATTGCCATGGGGATTTTATACACTTTGGCGAAGGAGTAGTTAAAACATCCAAAGAATTGGATAATTCAAACGATACACTTACGAACAAACCAAACAATTCAAGCAACGCTATGCTCGAAGAGTTATATTCCGATGAAACTACAGCTATAAATGTACCAGCTGAACTTCCAAAGCAATCGAATGGTTCGAACGACACAGTTATGAAAGAATTAAACTGTTCAAGCAACGCTATCGCGGGAGAATTAGGTCCTAGTGAAATTGAAGCCACCTGTTCTGAAGCACCGGAGCAACAAAAGGGTCCAGAGAATACGGCTGTGGGAAAGTTAAGCGATTCAAACGTTGTATCCATGTTTAGTACATCATCGATGAAGCTAAACGATCCATGCAGGACACCTTCAGGAAGATCAACGCCTTCAAGACGATTACACAGTCCATATAGTACACCTTCGAAAGGTTTGAACAACTGCTATGATACACCATCGAAAAAGATGAGACAGACCATTCTCACAGAATTCATTACAGTGTATAAAGAGGAACTAAAAGAGGAACCAAAAGAGGAAGCTGTTACTCCAAAAAAGCTTAGTGTCACAGAGAATACTTCTGTCTCTTGTGAGCAGTCGACAGACGAATTGTCAAAATCTTTGGATGTTATGAACATTTCTACTCCTGTTAATGGTAGCAAACGTAGCAATGCAGACAGACAACCATTTGTTACGATTCATATGGATTCCAACACCATGATGTCTATGTTGAATGAAAACAAGCAAGCTAAACTTGACACACCTACCAATTCACGTAGCTTATTTTACAATCTTAGATCAATGAAACCAAATGCTTGCGTCTCGCCGTATTTCGAAAAGTATGGTTATAAATTGACAAGGGAATATGGTAAAAATTACTATATGACTAGAAGGAAGCAAAAAATGACGGAAAAAGAGTTGAAGtttatatttcagtgcaaagAATGTGTGGTTGGTTTAGAAAGGTGCGATTATATGTTGAGGGACATGGATAAAGGTGCAGTTACTCAAGAGAAAAATTTCGAAGGTACAGTAATAAAGACTGAGAATGTCGAAAAATCTGCCGAAACGTCGATAGAAAATTCTACCGAACTCGAGGAATCTATTACCGATACATTGATGGCATTTGAACAGAAGTTCGAGGAGTACGATGATAATATTGATGTTAATCAAGAGAGCATGTTTAAGTgtcatgtttgcagaaaagaatttcatttatgGGTCGACTTGTTGAACCATATGGAATCATCCCATATTGTTTATATGTCTAGCATCTGCAATGCACGTTACACGCTCATGAAAAACCTATTAAAACACTATTTTCGCCAACATATTACATACAAGGAAAACAGATGTTGCGTGTGTTACGAAATGTTCGACTCGCGAATGTCGCTCAAACGGCACTTGACGTTGCATTGCCTAAAGATTACTCCGTCCCAGTACGATACTCTACCGGTTGATGTTGAGGTAAAGTGTCTTAAGATCAAAAGATATAAATGTGACAATTGCCAAAAGCGATTCTTGCTTGAATCGTGCTTGGATTTACATAAAAAGGGATGCAGAATAAAGAAACGACGTTTGTTCGTTGCAATTGCTCCAAAGAAATCTACATTGGTCTCGGTACCACCGAGCAACATCAATTCTAGTGTAACAAGGGACATCAATTCTAGTGTGACGAGCAACATCAATTCTAGTGTAACGAGCAACATCAATTCTAGTGTAACGAACACGCAAGAACTTTCCTATTCGTCGGTGCTACATTCGTCGCACAAAGAACCTATACAGGTTTGCGAGCCTGAGCAAATGACACCTAAGCTTATTGAGGCGAACAATACCGTGACTACCGACGCTGTGCATTCTGTACCTCAAATACATGCGAAACAAAAGAGTTTGATTAACGGAGTTGTACGTGTGAAAGGCTACCAAGACGATATGCCGAACAAAGCGAAATTTTTCTGTGGCATTTGCGACAAACAGTTCCAAACGTTCCAAAACTTGTGCATACACGAGAGTACCTTCTGCAGGCCGGCCAATAATAAGTGCACCGTATGCGGCACGGGGTTCACTACGAAAAAGTTGCTACAAGTCCACATGCTCGCGACTCATTCGCCTTTCTATTTGAGTAAATACAGCTATTTCTGCAAGTTTTGCAATCAAGGATTCAACAAGGCGATAAGTCTTCGTATACACGAGCGACACTTTCACACCGGTCACGCCATGGGCCAAGCGCTGAACCTCAATCATCAGCGGAAGGTTAGCCCAATTTGCAGTATCTGCAACCTGTTGTTCCAGTCCTACAAGCACTTCATCGAGCATAACATGTATTACTACAGAGGTCAGATCTTCGAATGCAAACTGTGCAATAAATCGTTTCAAGGAATGTTCAGGTTTCACCATCACATCAAGTTGGACCATTATTCGATGAATCCGCAGAAACCGTACGTTTACAAGTGTAACCTTTGCAACGAGGGTTTCTACCACGAATCGCATTTCCACGCGCACAAATTTCACGTTCATTCGGAAGATACGGTGCCTTTGTTGAACACCATGCAGGACCATAATTACGCGTTGACATCTAACACCGTCGCAACGTCGGAAGAGTTGACGATTATAAAGCTGAAAATGTATTCCTGCGAGATATGCGGCATGAATTACACCAACAGGAAAGATCTGATGATACATCAGATCGAGTACTCCGTAACCGGTCAATTCCAATGTGTGGAGTGCAGCCGAAAGTTTCGCACCAGTTCAATACTTGCCAAGCACTACAGCTTGAATCACACCGGTTCTGACAGTCACGGAAACCTGAAGTGTAACATTTGCGAGGAGGTGGTGACCAGCGAAGCGTCGATGTTCTGTCACAAAAAGCATTTTCACATGGAGAACATTTATCCCACGGAGAAGAACGTCGCATTGAATGCAGTCGACATAAATCAACGGAAACGCGAGGTGCTAAATAAGTCCACTAGTGTAATCGACAAATTTATAAGCGTCACCGAGAGATGTGCGTGTTTAACCTGCGGTATGCAATTCCCTACGAAAATCAGCTTAAaggaacatctgtttgaattTTCAGATATAGGCATGTACAGCTGTGCCGTTtgtgaaagaaaatttgtgGACTGTGCCCAATTGGAGCAGCACAAAATGAAGCACTTCATAATGTCCAATGAATCGTCTCGACATCGGTGTCCTATATGCAACGAAAGCTTCGAACATCCGGTGAACGTTCGTATGCACGTGTTGCATCTACACCGGTACGAGATGTACAGTTACGACTGCAACGCGACCAACGAATCTGACGTCACCGACAACGTTCAGAAGAACTCCGCTGTGCCTTTCGCTAATTCCATGCGGGAGAACATCGTCTCGTGTCCTGAATGTTACGTAGGGTTCAGCAGCAAGAAGAATTTAATGAAACACAGATCTCGTTACGCGAACACTGGAGATTATCAGTGCATACACTGTAATCGTAAATTTCCTTGGCAGACTACCCTCGAACAACATTTACGTAAGCATACCGGCGACGAAAATCAGTTATTGAAGCATCAATGTCTTAATTGCACGGAGAAATTTCGAAGCTCCGTGTCCTTGTACTCCCATATTATTCACTCTCATAATGGCGTGCGTCCAGATCGTGGAAAAACTAACGACAAAGATAGGTCTGACGGTAACAATGCGAACGGTGGTAATACTTTTCGCGGTAGTGCCGTAACCGCGAGTGCAGCGCCAGCGTACAATGTCAACGCCGAGGACGCGAATAAAGATAATGAGGTAGACAAAGAGAAGAAAGCCGTTGAAGAAACCAGATTAAGCTACGAGGAGTATTATATGTGTCTCATGTGCAAGTCCAAATTTCTAACCTTAAGAACAtttcaggaacattttaaaacCGTTCATAAAGGCAACAGTCAGAGCGAAACGACTGCAGCGCAGTCTGACGATGCAAATAAGAAACATTGCGTAACTTGTAAGATGGTGTTCAACGACGAGAAGAGCTTCGATGAACACATGCTGAAGCATCGTAAAACTGATCGCGATTCGCTtaccaataaaaatgaatccgAACAACGTAACGTTCCGTCAGAAAAGAACTCCAACGATGCGATAGAAATTATTTGGGAAAAAAAGTCGAGTCCCGTCGAATGTATAGTGATCGACGACGATGAGGATTCTAACATCTCGGTAGGAGTTGAAGAcattcctcctcctcctcctcctcctcctttgTACGAACAGTGTAAACTGAGGGTGAAATCATTCgcgaaaatttttaattga
- Protein Sequence
- MARSVVYVRSVNAVFTDVQLDEYSNRFKYGLKIKKEPMDESDVTLSVDTNVRDEDETIGSEDKHTNGSNRAEVPVLPQESVNSGNGNHNNRKRKRATGGLRHKHPLCTVCFVPFKNRNALKMHTIIYSKSFKCQRCNIVFNGEYLWRRHLMMGCDLKVSSGLACYICNKNCYDKKTVQSHLFHCHGDFIHFGEGVVKTSKELDNSNDTLTNKPNNSSNAMLEELYSDETTAINVPAELPKQSNGSNDTVMKELNCSSNAIAGELGPSEIEATCSEAPEQQKGPENTAVGKLSDSNVVSMFSTSSMKLNDPCRTPSGRSTPSRRLHSPYSTPSKGLNNCYDTPSKKMRQTILTEFITVYKEELKEEPKEEAVTPKKLSVTENTSVSCEQSTDELSKSLDVMNISTPVNGSKRSNADRQPFVTIHMDSNTMMSMLNENKQAKLDTPTNSRSLFYNLRSMKPNACVSPYFEKYGYKLTREYGKNYYMTRRKQKMTEKELKFIFQCKECVVGLERCDYMLRDMDKGAVTQEKNFEGTVIKTENVEKSAETSIENSTELEESITDTLMAFEQKFEEYDDNIDVNQESMFKCHVCRKEFHLWVDLLNHMESSHIVYMSSICNARYTLMKNLLKHYFRQHITYKENRCCVCYEMFDSRMSLKRHLTLHCLKITPSQYDTLPVDVEVKCLKIKRYKCDNCQKRFLLESCLDLHKKGCRIKKRRLFVAIAPKKSTLVSVPPSNINSSVTRDINSSVTSNINSSVTSNINSSVTNTQELSYSSVLHSSHKEPIQVCEPEQMTPKLIEANNTVTTDAVHSVPQIHAKQKSLINGVVRVKGYQDDMPNKAKFFCGICDKQFQTFQNLCIHESTFCRPANNKCTVCGTGFTTKKLLQVHMLATHSPFYLSKYSYFCKFCNQGFNKAISLRIHERHFHTGHAMGQALNLNHQRKVSPICSICNLLFQSYKHFIEHNMYYYRGQIFECKLCNKSFQGMFRFHHHIKLDHYSMNPQKPYVYKCNLCNEGFYHESHFHAHKFHVHSEDTVPLLNTMQDHNYALTSNTVATSEELTIIKLKMYSCEICGMNYTNRKDLMIHQIEYSVTGQFQCVECSRKFRTSSILAKHYSLNHTGSDSHGNLKCNICEEVVTSEASMFCHKKHFHMENIYPTEKNVALNAVDINQRKREVLNKSTSVIDKFISVTERCACLTCGMQFPTKISLKEHLFEFSDIGMYSCAVCERKFVDCAQLEQHKMKHFIMSNESSRHRCPICNESFEHPVNVRMHVLHLHRYEMYSYDCNATNESDVTDNVQKNSAVPFANSMRENIVSCPECYVGFSSKKNLMKHRSRYANTGDYQCIHCNRKFPWQTTLEQHLRKHTGDENQLLKHQCLNCTEKFRSSVSLYSHIIHSHNGVRPDRGKTNDKDRSDGNNANGGNTFRGSAVTASAAPAYNVNAEDANKDNEVDKEKKAVEETRLSYEEYYMCLMCKSKFLTLRTFQEHFKTVHKGNSQSETTAAQSDDANKKHCVTCKMVFNDEKSFDEHMLKHRKTDRDSLTNKNESEQRNVPSEKNSNDAIEIIWEKKSSPVECIVIDDDEDSNISVGVEDIPPPPPPPPLYEQCKLRVKSFAKIFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -