Basic Information

Insect: Tetrapedia diversipes
Gene Symbol: -
Assembly: GCA_033822845.1
Location: JAOPTO010000536.1:888399-890063[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0025 0.33 12.2 0.3 3 23 282 303 280 303 0.96

2 9 0.0042 0.54 11.5 1.1 3 23 309 329 307 329 0.98

3 9 0.00052 0.067 14.4 1.3 2 23 336 358 335 358 0.95

4 9 3.6e-05 0.0046 18.0 0.6 1 23 365 388 365 388 0.96

5 9 0.17 22 6.5 0.2 1 12 393 404 393 407 0.85

6 9 2.9e-05 0.0037 18.3 4.2 1 23 424 446 424 446 0.97

7 9 1.3e-05 0.0017 19.4 0.8 1 23 450 473 450 473 0.91

8 9 1.7e-05 0.0022 19.0 1.6 2 23 478 499 477 499 0.97

9 9 9.3e-07 0.00012 23.0 0.9 1 23 505 527 505 527 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0025	0.33	12.2	0.3	3	23	282	303	280	303	0.96
2	9	0.0042	0.54	11.5	1.1	3	23	309	329	307	329	0.98
3	9	0.00052	0.067	14.4	1.3	2	23	336	358	335	358	0.95
4	9	3.6e-05	0.0046	18.0	0.6	1	23	365	388	365	388	0.96
5	9	0.17	22	6.5	0.2	1	12	393	404	393	407	0.85
6	9	2.9e-05	0.0037	18.3	4.2	1	23	424	446	424	446	0.97
7	9	1.3e-05	0.0017	19.4	0.8	1	23	450	473	450	473	0.91
8	9	1.7e-05	0.0022	19.0	1.6	2	23	478	499	477	499	0.97
9	9	9.3e-07	0.00012	23.0	0.9	1	23	505	527	505	527	0.99

Sequence Information

Coding Sequence: ATGCTCACGAGAGTCGCAAAGAATTGTGACTCGGTTAACAAGGAAACGACGTTTTCGAAAGACAAGGACGGTTTGACCGACGATCCATCGGGGGCCGAAGTGATCGTCGAGTCGGTTCCCAAAGAGAATACGACCAACAGTCAATTTCAATTGGGCAAAGCTGGCAACGCGTTACCACTGAACAACGCTAATAACAGTTCCTCGTGGAAGATCAAGGAAGATCCAAACATGGATTCGGTGAAGCAATTTTTGGTTCCTGTCAGAGACCCGTTGACTAACGAGATCAAGCACACGTTGGTGCCAATCGAGGTGATAGACGATTCTGGACAGAACATGATCAAAAGCATTTTGATGCCTGTTCACGGTAAAGATGGTTTGATATCGTACGACGTTAAAAAGGTTGTGGTGCCTATCCAGCCGGAGTTGAGCGTGCATCAGACAGCAAGAATCGAGAATAAATTGGCGTGGAATAACAATGTAACTGCGATGAATCAGACTGAAGATAATAGACAAGTGTCGCCGTGCGACAATGCAGCGAAACAGATGGAGGAGAACAAGAAGAAGGAGGACACGCAGATAATAATACTGTTAACCGGAGATAAACACGTGGAAGACAGCGGAAGGAAAGGCGAACAACAAGCGGTACCGAGtgaaaacgaagaaacagAAATGGACGATGTATGGAGGGAGAGTGCGGAGGAGATACAGCAAGAAACGGAAATGATGGAAGAGCCAACGAGGCAAAGAGATGAGGAAAATAAGGAGACGATACCGCAGGAAGTAGCTGAGCCGGATCCGGCGAAAGAAGAGGTGGACGAGATACTGCACAACATAAAAAGCATTTGTCCAGTTTGCCTAAAGGTTCTGAAAAGCGAGAAACTGATGCGAAGGCACGTCCGAAAGATACACGAGAAGAGATTCGGTTGCAACAGATGCAACAAATGGTATTCGTCGAAGCAGGCCCTGCAGGAGCATCAGAAGTCGCACGAGGACAATTTCTACTTAGAATGCTCCGTTTGCCATTTGAGGTACAAACGTCAGGCCGGTTTAAGATACCACCAGATTCGGATGCACAGCAACGTGGAGCCGAAGTACATGTGCGATTACTGCGGGAAACGGTTCAAGCTGAAGTTCGATCTGGGCCTGCACATCGAGAAGATTCATCTGAATCCCATTCACATCTGCAAAATCTGCGGCAAGGTCGTGAAGAACATCACGCACCACGAGTGGCAGCACGAGAGGGCGGAGAAGAAGGCGGCGAATCGTGGCTACCGTTGTCATCTCTGCACGAAAAAGTTCACCACTCGCAACAACCTGGACAACCACCTGCTGCTGCACAAGGACGGCTTCAAGTGCAACCGTTGCGGCGAGGTGTTCGCCTCGCAGAGCTCTCTCAGCAACCACAAGACGGCGAAGCACAAGCCAGGCACCACGTGCAGCATCTGCGAGAAGACGTTCAACAACACCAGCAACTTTTACCAGCACGTGCTCACGCATGCCGGGATCAGACCGTACAGGTGTGATATCTGTGGAGAAGATTTCACGCAGAGATCCAGCGTGCTGAGGCACCGGAAGACTCATCCGGGACCACTTCCTCCTTTCACGGAGACCACGCCTATCGCGAATCTTGCTAAACATGTTTTGCAAAAACTCTCGTCGGATTGA
Protein Sequence: MLTRVAKNCDSVNKETTFSKDKDGLTDDPSGAEVIVESVPKENTTNSQFQLGKAGNALPLNNANNSSSWKIKEDPNMDSVKQFLVPVRDPLTNEIKHTLVPIEVIDDSGQNMIKSILMPVHGKDGLISYDVKKVVVPIQPELSVHQTARIENKLAWNNNVTAMNQTEDNRQVSPCDNAAKQMEENKKKEDTQIIILLTGDKHVEDSGRKGEQQAVPSENEETEMDDVWRESAEEIQQETEMMEEPTRQRDEENKETIPQEVAEPDPAKEEVDEILHNIKSICPVCLKVLKSEKLMRRHVRKIHEKRFGCNRCNKWYSSKQALQEHQKSHEDNFYLECSVCHLRYKRQAGLRYHQIRMHSNVEPKYMCDYCGKRFKLKFDLGLHIEKIHLNPIHICKICGKVVKNITHHEWQHERAEKKAANRGYRCHLCTKKFTTRNNLDNHLLLHKDGFKCNRCGEVFASQSSLSNHKTAKHKPGTTCSICEKTFNNTSNFYQHVLTHAGIRPYRCDICGEDFTQRSSVLRHRKTHPGPLPPFTETTPIANLAKHVLQKLSSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -