Basic Information

Insect: Tetrapedia diversipes
Gene Symbol: -
Assembly: GCA_033822845.1
Location: JAOPTO010000536.1:894770-895852[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0038 0.5 11.6 3.0 1 23 91 113 91 113 0.97

2 9 2.3e-06 0.0003 21.8 0.2 1 23 119 141 119 141 0.99

3 9 0.0021 0.27 12.5 2.7 1 23 146 169 146 169 0.96

4 9 1.3e-05 0.0017 19.4 0.8 1 23 175 197 175 197 0.97

5 9 1.1e-05 0.0014 19.7 5.1 1 23 203 226 203 226 0.96

6 9 7.6e-05 0.0098 17.0 6.6 1 23 236 258 236 258 0.98

7 9 9.4e-06 0.0012 19.9 0.9 1 23 262 284 262 284 0.99

8 9 0.0002 0.025 15.7 2.6 1 23 290 312 290 312 0.98

9 9 0.0044 0.57 11.5 0.2 1 23 318 340 318 340 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0038	0.5	11.6	3.0	1	23	91	113	91	113	0.97
2	9	2.3e-06	0.0003	21.8	0.2	1	23	119	141	119	141	0.99
3	9	0.0021	0.27	12.5	2.7	1	23	146	169	146	169	0.96
4	9	1.3e-05	0.0017	19.4	0.8	1	23	175	197	175	197	0.97
5	9	1.1e-05	0.0014	19.7	5.1	1	23	203	226	203	226	0.96
6	9	7.6e-05	0.0098	17.0	6.6	1	23	236	258	236	258	0.98
7	9	9.4e-06	0.0012	19.9	0.9	1	23	262	284	262	284	0.99
8	9	0.0002	0.025	15.7	2.6	1	23	290	312	290	312	0.98
9	9	0.0044	0.57	11.5	0.2	1	23	318	340	318	340	0.96

Sequence Information

Coding Sequence: atgaaaaattacgtTGTTGATTGCAGAACTCTTGGGATCGTAGATCAGGACACAAAATTCATTGAGTGGTGCGAGGAGGCCATCGTGATCTCTAATACGGAATCTGACCCACTTCGTTCGCCGATGGAAGAAGACCCATTGCTCATCAAAGAGGATCGTATCTCGATTTCGCAGCCGGTGAATCGCGCTATAAATTCTGACGATGCTTCTTCGTTGACGCAACTGGCGATAGATGGAGGAAGAAACAAAAGGGACGAAGAGCCTAAACTCTACGACTGTCCCACCTGCAATTTGCATTTCGAGAGACCTGTGGATTGCAAACGTCACATGGTCAAGCACAGTAATCTACGCCCGTACGAATGCGGAATCTGCGATTTGGCGTTCAAACGTCCCTCCGACATGTACTCTCACAGGCGAATCCATCGTAACATCGAGCACGCGTGTGACGTATGCGGCTTTATCACGAACAGCAAGGTCTCCTTGAGGATGCACCATCGACGAATGCACAAACGTGACTTCCGTTATCAATGCGATCAGTGTAACAAGGGTTTCATGTCCAACTATGATCTGCAAGACCACAAGGCGAGTCACCTGGGCGAAAAGACGTTCTTCTGCGATCACTGCGGGAATGCTTTCTCCCAGAGATCCCACTTGATGAAGCACAAACGGAACATTCATGGAATTCATAAAGACTCGGCCAAGCTGTTCCAGTGCGACATCTGCCAACAGAACTTCACCTCCAAGCACTATCTTTGCAATCACCTCAAGCTGCACTCGAAAAGGTTCCAGTGCGCCGAGTGCGAGAGGGAGTTCCCGACCAATTACAAGCTGAAGGAACACAGCCGGACGCATACGGGGGAGAAACCGTATACTTGCGATGTTTGCTCGAAAGGTTTTTCCAAGTTGTGCACGCTTAAAGCACACAAAGTGACGCACACCGGGGAGAAACCGTATCTCTGTGACTGGTGTGGGACGAGCTTCGCTTGGATGAGCAGTATGCTAGCCCATCGCCGAAAGCATCCCAGATCTTATTCACCGACCAACGTTCTTCTCGATGTTGTCCAGAGCGACACGCATAAGTGA
Protein Sequence: MKNYVVDCRTLGIVDQDTKFIEWCEEAIVISNTESDPLRSPMEEDPLLIKEDRISISQPVNRAINSDDASSLTQLAIDGGRNKRDEEPKLYDCPTCNLHFERPVDCKRHMVKHSNLRPYECGICDLAFKRPSDMYSHRRIHRNIEHACDVCGFITNSKVSLRMHHRRMHKRDFRYQCDQCNKGFMSNYDLQDHKASHLGEKTFFCDHCGNAFSQRSHLMKHKRNIHGIHKDSAKLFQCDICQQNFTSKHYLCNHLKLHSKRFQCAECEREFPTNYKLKEHSRTHTGEKPYTCDVCSKGFSKLCTLKAHKVTHTGEKPYLCDWCGTSFAWMSSMLAHRRKHPRSYSPTNVLLDVVQSDTHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -