Tdiv011798.1
Basic Information
- Insect
- Tetrapedia diversipes
- Gene Symbol
- -
- Assembly
- GCA_033822845.1
- Location
- JAOPTO010001078.1:101170-109192[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.21 27 6.2 1.4 1 23 303 325 303 325 0.91 2 12 6.9e-06 0.00089 20.3 3.2 1 23 330 353 330 354 0.97 3 12 0.0042 0.54 11.5 0.6 3 23 414 435 413 435 0.97 4 12 9.4e-07 0.00012 23.0 0.7 1 23 441 463 441 463 0.97 5 12 0.0088 1.1 10.5 0.1 1 23 472 495 472 495 0.89 6 12 2.4e-07 3.1e-05 24.9 3.6 1 23 501 523 501 523 0.98 7 12 4.9e-06 0.00063 20.7 1.0 1 23 529 551 529 551 0.98 8 12 3.3e-05 0.0042 18.1 2.0 1 23 557 579 557 579 0.97 9 12 1.7e-08 2.1e-06 28.5 2.6 1 23 585 607 585 607 0.99 10 12 1.1e-05 0.0015 19.6 5.7 1 23 613 635 613 635 0.98 11 12 1.1e-05 0.0014 19.6 1.6 1 23 669 691 669 691 0.98 12 12 2.6e-07 3.3e-05 24.8 1.5 1 23 697 719 697 719 0.98
Sequence Information
- Coding Sequence
- atGGCAGAAGTACGGCTTTATGATTCAACAATTTGTCGATTATGTGCAGAAGATAATGGCAATGGAGAATTACTTTACATGGGAGGTAATGATGATCCAGATTTAAGTTCCATGGTCAATCGGTACTTGCCGCTCAAGatTCAAGATGATGGCAAATTACCACGTACTATTTGCCCTGGATGTAATATTCAATTGGAAGCtacaatacaattttttgaattattgGTGGATGGTCAAAGGAAAATTCGTGAGATGTGGAAGCATCAAGTAGAACAACAACGTAAAGCTGAACGAGAACGTGTTCGTGTTGAAAAGGATAACACAGAAGTTAGAACAGAAATGCCTGAATCAGATAATGTTTCAAGATACAATGAGGAAGACCAATTTGAacaacaaattataataaaaaTAATGCCAGATGGTTCTATGTATGCTACGGAACATGAAATGAGTTTGCAAATGGAAGGTTTAAATAAACCAAAGCGAAAAAGAGGACGTCCACCAAAATCTCATAAGGAAAACATATCTGTGGAGTTAACAAAAGCAGAAATGCTAGAAGGAGTTAGCCAAGAAGAACAAGATAAACATGAAGAAGAGACGGATGATATTGATGGAGATGGAAGACGTCGTAGAAAGCGTAAAGTTCCTAAAAGATACATGGAAGCAGTTCAAGGCAAGGAATTAGAAAGAATATATAAGGAAGAAGGAGTAATTGATGAAGAAGATGATGATGAACCTGATAATTTTGAAGATTCTGAAGAACAGTTAAATATATCTGTCCCTGATAGTCAAGAAGaaataattgGTCACTTAGAATCCGAAGAAGGAAAAGATCTTGGAGAATTAGTGATAGTAAATCGAGGTAGAGGACGGGGACGACCAAAATTACGCCGTAggagaaataaatttacgtGTCAGTTATGTGGCCGGGGATTTCTTCAACGTAGTAGATATATTATACacaaGAGTTTCCATAAAGGCATAAAATATGAATGCTCCGAATGTAAGAAACTGTTTACAAGTAAAGAAAACTTGGAACTGCACCAAAAAACAACTCATCATGCTGGAGATTGTACTGATCAAAATATTGAACATAACATCCacgattcaaatttaaaaccaAAATATCAGTTATCTGAAGAACATAATATTTCTGATGTATTTGATCATGCTTTAACTGAAGAacaacatataaataaattttcagataATTCTAATGATTCTAAGAAAGATATTTTATGTGAACAATGtgagaaattatttgaatcaAAAGATTCTtacaatttacatttaaaGATGATGCATGACTATGAtaagttatttatttgcactatttgtaataaaaattttgccCAACAAACAGCTTTGAAAAATCATATGTCAATGCATGAgaaaaataagTTAGAAAAAGAATATCCATGTGATATTTGCGGAAAAATACTTAATCATCCTAGTTCTGTAGTATATCATAAAGAAGCGGAACATAATAATGGTCGCCGATTTGTTTGCAATAAATGTGGGAAAAGTTTTAAACATAAACAGTTATTACAACGTCATCAACTTGTACACTCTGATGATCGACCTtatatttgcaaatcttgcAATGCCAGTTTTAAAACTAaagcaaatttaattaatcatcaATCTACACATACTggcgaaaaaaaatatttttgcgaaATTTGTGGACAACAATTTGCACATAAAACTAGTCTTACACTGCATTACAGGTGGCATACAGGTCACAAACCATATACTTGCAAAGTATGCCATAAAAGTTTTTCACAAAATGGAAATTTACAAGAACATATGCGAATTCATACAGGAGAAAAACCTTATTGTTGCGATTATTGTGGCAGAAAGTTTACAACTTCTTCACAATTTAAACTCCATGTTAAAAGGCATACTGGTGAACGTCCTTGGAAATGTGAATTCTGTGCAAAATGCTTTCTGCATAAAGATACTTGGAAGTGCCATGTGCGTAGACATAAAGGAGAGCGTCCTTTTCAGTGTGCTCATTGTAATCGAGGTTTTACAGAACAGTGGGCCTTAAAAAAACATCTTCGTTTGCATACtggtgaAAAACCTTATTCCTGTGATGTTTGTGGAAAAGCATTTGCAGATTGTTCAAATCTAACAAAGCATAAAAAAGTACACAGAGAAACTAAGCTTTCTACAATAAGTGAAATAGAAGGATCTCCAATTGGAGAAGTTTGGCAAATTTTACCAAGTTCTCAAGAATCTGATGAACATTCATTAACTGATCAAATGAGTCAAGTTATTGCAACCGATGATGCTTCTGAAGATGGCATTCAACAAATTATATATGTTTCATACCAAGATCCAGATGATCCTAATCAATCTCGAACTTTACATTTCgTTGATGCTGGAAtgataagaaataaagaagagaaaacaaatgCAAATCAGTCATTATCGCATTTAAGTGTCGGCAGTGATGGAATGCTTTCTAATGCAGCTCATGTTAATGAAAATACTAACTCAAATGAACGAATAAATGTTGAACTTTCAGAATCTGATCTTCAACTTCAGATTACAGACGAAGAAGGTAATCCGATTCCTCTTTCAATTCAAGATGCCCAACAGCTTTTATCCCAGAATCAATTTGTTAATCAGCTTAGTGatggtcaagaaattagagtTCATCCTGGAGTAATTCCAGATGAATTAACAGGATCATTAAGCGTGCATGTTAATCAAAATTctgatataaaaaatgttaacatTACTAATACAGTGgaaacaaaaacaaagaaTATTTCAACTGTACAGACAGATGCTGAAGCAATTGTGAAGGCATTAGAGgATGAAGATACGGATGCAAATGCTGTTGCAACAATTAATCAAATGGAGGAATCAGAACAACCAGGGATTGTCGAAAATGAACAAGCAATAGAATTCACAACACAAGATGGTCAGAAAGTTCGTTTAGTTACTTCTTATCATGTTGACCCACTGCAACTTGCTTCCGAGTACCTGactattgtataa
- Protein Sequence
- MAEVRLYDSTICRLCAEDNGNGELLYMGGNDDPDLSSMVNRYLPLKIQDDGKLPRTICPGCNIQLEATIQFFELLVDGQRKIREMWKHQVEQQRKAERERVRVEKDNTEVRTEMPESDNVSRYNEEDQFEQQIIIKIMPDGSMYATEHEMSLQMEGLNKPKRKRGRPPKSHKENISVELTKAEMLEGVSQEEQDKHEEETDDIDGDGRRRRKRKVPKRYMEAVQGKELERIYKEEGVIDEEDDDEPDNFEDSEEQLNISVPDSQEEIIGHLESEEGKDLGELVIVNRGRGRGRPKLRRRRNKFTCQLCGRGFLQRSRYIIHKSFHKGIKYECSECKKLFTSKENLELHQKTTHHAGDCTDQNIEHNIHDSNLKPKYQLSEEHNISDVFDHALTEEQHINKFSDNSNDSKKDILCEQCEKLFESKDSYNLHLKMMHDYDKLFICTICNKNFAQQTALKNHMSMHEKNKLEKEYPCDICGKILNHPSSVVYHKEAEHNNGRRFVCNKCGKSFKHKQLLQRHQLVHSDDRPYICKSCNASFKTKANLINHQSTHTGEKKYFCEICGQQFAHKTSLTLHYRWHTGHKPYTCKVCHKSFSQNGNLQEHMRIHTGEKPYCCDYCGRKFTTSSQFKLHVKRHTGERPWKCEFCAKCFLHKDTWKCHVRRHKGERPFQCAHCNRGFTEQWALKKHLRLHTGEKPYSCDVCGKAFADCSNLTKHKKVHRETKLSTISEIEGSPIGEVWQILPSSQESDEHSLTDQMSQVIATDDASEDGIQQIIYVSYQDPDDPNQSRTLHFVDAGMIRNKEEKTNANQSLSHLSVGSDGMLSNAAHVNENTNSNERINVELSESDLQLQITDEEGNPIPLSIQDAQQLLSQNQFVNQLSDGQEIRVHPGVIPDELTGSLSVHVNQNSDIKNVNITNTVETKTKNISTVQTDAEAIVKALEDEDTDANAVATINQMEESEQPGIVENEQAIEFTTQDGQKVRLVTSYHVDPLQLASEYLTIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00361071;
- 90% Identity
- -
- 80% Identity
- -