Tdiv022492.1
Basic Information
- Insect
- Tetrapedia diversipes
- Gene Symbol
- bab1
- Assembly
- GCA_033822845.1
- Location
- JAOPTO010002329.1:623014-631991[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 3.1e-14 53.1 0.0 1 43 201 244 201 246 0.95 2 2 3.4 9.1e+03 -2.8 1.8 6 15 324 333 322 335 0.88
Sequence Information
- Coding Sequence
- ATGCCCGACGCGCGTACTGCATCGAATAAATTAGACACCGTCATCTCGAAGGAACGTGGAACGAATCACGGGCCTTATCTTCCCGTTCAAGGTTCCGAGTCGCACGCAGCCGCCGCACCTACCGCTAttataaAGCGCGACGCGCTAACTTTCGGTAGCGTCCTCCTGGTGAGCCTCGAGTCGAGACGGGGCGGCAAAATTGTGGAGAACGCTAGCGGCGCTAGAGCGATAGCATTGGCCGGAGAGGGAAGAGCGGGAGGGGGCGAGGAAGGGGTTTCGAGTTTGATAGAGGATCGAGGCGCGTATCAAATGAGGAACGAAGCCCTTCGAcccttaaaaattaatttggaaaGTCAGCCGAGTGGCGCGGCTCCTGGAAACGATTCGGTATATGAGAAGTCCGGGCGTCGGGACGCCGCGTCCGATCTCTCGGCCAAGCTGTTGGAGTCATCCCACGCTTGGCTCGGAGCCTCCACATCGAGTATAGCAGCAGACAGCTACCAGTATCAGCTGCAGTCGATGTGGCAGAAATGCTGGAACACCAATCAGAGCCTGGTGCATAATCTACGCTTTCGAGAACGCGGTCCCCTCAAGTCTTGGCGGCCGGAAACGATGGCGGAGGCGATCTTCAGCGTGCTGAAGGAAGGACTGTCCTTGAGCCAAGCAGCAAGGAAATACGACATCCCGTACCCGACGTTCGTGTTATATGCCAATCGGGTACACAACATGCTGGGTCCGAGCGCCGACGGTGGAGCCGATCTTCGGCCGAAAGGTAGAGGCAGACCGCAAAGGATTCTGTTAGGCGTTTGGCCGGACGAGCACATTCGCGGAGTGATTCGAGCAGTGGTATTCCGCGACGGCCACTCCCCGCACATCGTGAAGGAAGAGCCAACACCGATGTACCCAAGCCTGGCAAATTACGCCGCCTGCAACGGTCCCGAAGGCGCGGTCAGTCCCGGAGCAGCAGCCGCAGCCGCGGTTGCAGCGGTCGCTCAAGGACTGCGACACCAGATGTGCAGCATGGTGGCGGCGGCGCATTCGCAGCAGCACGACATGATGGCGACAAACCTCTCGACGAATTTGTCGACGAGCCTCTCGTCGAGCCTCTCATCGAACCTCCAGGCAGCGATGCAGGCTAGCCAGCATCATCACAACAGCACCAACAGCGGCGTGCCCGTTATCGGTAGCAACAACGGAAGCGGCGGTGGAATGGCCGGCGGGAACAACGGGAACTCGCCGTTAAATCTGGGACTGGCCAGTCCGGGATCCGGCGGCCCCCCGGAAAGTCCGATGGAGAGTCCTCTCGCGAGTCCGCTCGGTCCTCTGATGGATCCCGGGCACATACCTAGCAGCGTGGAGGTTGGCATAGGCGTCAGCGGCATGACCTACAAACCAGCGCGGAGCTTCGTCAGCCCGCGGCCGGAGAATCTCTTCCAGGAGGACATCGCGGATCTCGTGAAGAGTCCTCACGGGCTCAAGGACAAGGACAAGATCCCCGTGAAGCTGGAGCCGCTCACGGACTCGCGTTGCGAATAG
- Protein Sequence
- MPDARTASNKLDTVISKERGTNHGPYLPVQGSESHAAAAPTAIIKRDALTFGSVLLVSLESRRGGKIVENASGARAIALAGEGRAGGGEEGVSSLIEDRGAYQMRNEALRPLKINLESQPSGAAPGNDSVYEKSGRRDAASDLSAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPTPMYPSLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMMATNLSTNLSTSLSSSLSSNLQAAMQASQHHHNSTNSGVPVIGSNNGSGGGMAGGNNGNSPLNLGLASPGSGGPPESPMESPLASPLGPLMDPGHIPSSVEVGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSPHGLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -