Tdiv017958.1
Basic Information
- Insect
- Tetrapedia diversipes
- Gene Symbol
- retn_1
- Assembly
- GCA_033822845.1
- Location
- JAOPTO010002141.1:528915-543692[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-20 3e-17 63.5 0.0 15 89 119 191 106 191 0.95
Sequence Information
- Coding Sequence
- ATGTATCCGCAACGGTACCGATATCCTCGCTTCTGTGCACAAGGTACAATAGCAAAGCGGTTTCATCCATTAACTGGCATGAGGAATCAAAGAGAAGACAAAGTTGCGCTTTGTGGTTGCATTGCTTCGCCACATTGCTGGCATGTACCTGGCAGTCCTCCCAGCCGTACATCCCCCGCGGTCGCGATCGCAACCGAGACACCGCGCTACCAACCGCCTCTAGACGATCACGACCCCAAGTCTGCTCAACGTGCTCTTCGACGTCTTCCGTTTCctctttcttattttcttcgtgGATCCGTTTGTCTCGAAGACATCGAGAGACGAAACGAAGGCCGTGGTTGTGCTCGTTCGAAACGAGGAACTCCGATCAATCGGCTGCCGATCATGGCAAAATCGGTGCTAGACCTGTACGAGCTGTACAATTTGGTAATCGCCAGGGGCGGCCTAGTGGACGTGATCAACAAGAAGCTTTGGCAGGAAATCATCAAAGGCCTCCACCTGCCATCGAGCATCACATCCGCCGCGTTCACATTGCGCACGCAgTACATGAAATACCTGTATCCGTACGAGTGCGAGAAGAGACGGCTGTCAACGCCAGCAGAGCTGCAGGCAGCGATCGACGGGAATCGACGGGAGGGACGTCGGAGCAGTTACGGGGCGTATGCGGCGAGCGGCGGCCCGACGAGCGAAGGCCTCGTACAGAGGAATCCTCACACACCAAATTCCCTTGCGTTGCACGCGCAAATGTCGCCGTTATCGTTGGTGACCGCAGTGGCGGCCGGTGGCCAGCATCACGGGCCACAATCGCTGGTGAACGGAAGTGCCGCTCACACACCCTTACCTCACCACCCTCATCATCCACAGCATCCTCAGGGACTACCGGGACAGCCACCGAACGCAGGACCTATTCCCGGAATGGCGCCATCCGAGTTCGAGGCACGCATGGTCGAGTACGTGAAGCTGCTGAATAAGGAACTGAGGAGTGCTGGCGCAGGCACGCCACCGCCTATCATCCACCGTCAGGAAAGCGCGTCGCCGCCGTCCTCGACACCACCGAGGGACGCGGGATTCAGCGCTCTGGAAATGTCCCGGCTCACTCTGTGGAACATGTACAACAACAACACCCTGTATCCTGGAGTCGGCCATCAACCACCCATGTCACCTCAGACCTCGCATTCTCCGGTACCTCCAGCATCCAGCCCCGAACCTCAGAGGGAAGCCCTCGATCTTGGACTCAGGTCATCACCAGTGTCCTCGTCGCCCGCGAGGCAAAGTTCACCCTCTTCAGGGGGTAGCATGCAAGTAAAGAGGGAACAAGAACTGATCGCAACACCTGGACCTCCACCACCCAAGAGGTTACTCTCGGATGACGATAGTCCGATCGAGAAGAACGCCACAGCTTCTGTGGGCACGCACATCAAAATTTCCAATCGAGGAGATGGAAGGAGCGGTGACAATTCTTTGGTAGTTAGTATGGAGCTGAACGGAGTAATGTACCAAGGTGTTCTGTTCGCCCAAAGTGACAATAGGAGCGGAAGCAGTACAGCGACCAGTAACAACAGCAACGCGAAGGCGTTACGGAGCATGGTCTCGTGA
- Protein Sequence
- MYPQRYRYPRFCAQGTIAKRFHPLTGMRNQREDKVALCGCIASPHCWHVPGSPPSRTSPAVAIATETPRYQPPLDDHDPKSAQRALRRLPFPLSYFLRGSVCLEDIERRNEGRGCARSKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAASGGPTSEGLVQRNPHTPNSLALHAQMSPLSLVTAVAAGGQHHGPQSLVNGSAAHTPLPHHPHHPQHPQGLPGQPPNAGPIPGMAPSEFEARMVEYVKLLNKELRSAGAGTPPPIIHRQESASPPSSTPPRDAGFSALEMSRLTLWNMYNNNTLYPGVGHQPPMSPQTSHSPVPPASSPEPQREALDLGLRSSPVSSSPARQSSPSSGGSMQVKREQELIATPGPPPPKRLLSDDDSPIEKNATASVGTHIKISNRGDGRSGDNSLVVSMELNGVMYQGVLFAQSDNRSGSSTATSNNSNAKALRSMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -