Basic Information

Gene Symbol
-
Assembly
GCA_011636635.1
Location
VBVQ01003454.1:3531-9638[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.7 6.5e+03 -2.1 0.0 21 31 1079 1089 1069 1093 0.81
2 2 2.7e-08 4.8e-05 23.9 0.1 2 46 1437 1483 1436 1483 0.93

Sequence Information

Coding Sequence
atggagGAATCTGCAAATACGCCTGTACAGGAGAGTGGCCCCGACACCGTGACCGGTTCCGTTTCATTTACCGAATCGCCCAAGAAGTGCAATctatcattttcaattaactttGACTTTAATGACGTTAATAGCGAGAACTCGACCGACTCCGAAAATGCGGATCTACAAATTGATATATCCGAAGTGGACAATTATGAACCGTCCAGCAAGCATAGGAGAGAAGCTGTTGAAAAAGCGTTGATGCTCAATAAAATGGAAGAGGAGATTGAGAGACAGCTCGATGCTAAAGCTGCCAAAACCACGTTAACTGCCactaatgttaaaaatattttaaaacacgtTATCCCCTACGAGCACTTGATGGCAATGGTGCAAAGGTGGCTTCAAGATACAGAAAATGACATTAACTTTGGTCCTAAACTCACAAGAGCTAAAGCCAAaaagttAGCTGCTGCAAAACTCAATATACCATGGCCCATCACTACGGCGCAAAAAGCTTCCTCGGAAGTACAAGCTTTGATTCAGGAGGAACTAGCAGAAGATTCGTCCGACGAAGAATATAATCCTCCTGAACATGATAAACAGAGTGACGATGATAGAGAAGTGGAAAATACAGCGAATAGTGATATTGAGTCACATGTCACACGGTCGACAAATACAAAGGATATAGCTTCTTCCGAACAACAAGTCGCATCGCATGTACAATACGATTCTGaaggaatttttaagataCCTGCtattcCACATGTTGCGACAGAAGAAGAAAGTATTGGTCAAAGAACACGTTCTAAGCTATCGTTAAGCGAAACCTCTTTAGAGGAAATAGAGCAAGCATTTATACCACCTGACATAACTGCCGATATGACTGAAGATTGGGATTGTGAACTTGATGAAGATTGGGATAactttttgaaagaatttacgCAACCTTTGACCCAAGAACCAGCCATAGAAGATGATCCAGAGGCAGATCCGGAATATAATATCTTGGAGGACgaagaaatagatttatGGGACAAGGAAGAGCTTAGGACAGATAGAGCGGTAGAAGTTCCTCGCAAGGAGCAATATGATTTAATTGCAGAATTACTTGAATTAACTCCCATGTTCTCGACGCAAGAACAAGAAGTTGAAAgttcaagaaagaaaaaagttctagatatatataatacaacacCACCGATTGAAAATGATACTATGAATTGCTCTGTGGTACATCTTTTACCAGTACTTGCAGAATCTGAACTGCCAAAATTGGTGAATCCTGAACAACGTCTTTTATTAGCTACACAATTTCAGCAACATGTACAATTAATGGCACAACACTTTGTTATGACTTACATGCATCCAGAATATCATTCCCTAGCAAAATTGTGTAAACAGAATTTAACTAGTTTAAGatatttgaGTAATGGACCAAATTCTGCATTTAATGCAAAGAATTTGGAATCAGCTTTAAAGTTGGTATCAATTTGGGAAAATAAGTTCAATGACCCCAAGTTTTATGCAAactttaaaaagaatgtaacaaatgaaaatgctaaaattaacatatgtcATGCAAATAAGTCGAGACATTCCGAACACGTTCTTgctgaattagaaaaattatttgtcgaaAGTAAGGCTCTCATGTACCCTCAGCTTCTACCATGGATACCTTTCAGAAATGGAGCTAAATACGCAAAATCGGCATATTTAAAATCGGAAGAAACTTTAATTGCACTGGGCATAGAACAGTTCTTACCATTTGTTACATCTAAATCGAAAAAGtttcatacaaaaaaaatgcaattatttgatGTAGCTCAACTTATTAGTCATTATCTGCTACCGTGCAGAGATGCGAAAGgaatattgcattatattaacaaaCGGCGTGCTTCCAAGGATAAAAATCCAATCAAgcattattttgaaaaaggtTACGCTCCTAGAATAGTACATTATATAATGGTTGAAAATAAGCTGAAAGCTCCAAAAGATCAACCGATAGAACTTTTACCTCCAAGATGGCAAATGTATcttcaaaaagaacaaaaaaataataattcagcaAAAAGTATAGGTATaccttatttttacaataatctcTCACTTGAAAAggaaagatttaatataaacgcaATAATAAAGTCATATCCTAGTGTCCCTAGTAATCATCCTTTACGAAATCCGATTGTAAATATGTTACCAAAGATATTACCTGCAACTTCAAATCccaaatcttctttaaaaattgataactcTACTAaacaaaattctaaatttgatGACAGCGGCgataaaaagatatctgataataatacacaaaataCAGAGGTGCATAAGAGAAAAACAGCAGTATATAATAAAGCGCATACAAATCTTTGCTCCTTAAAAGCAAATACTTCAGAAGTAAAGCCAACGCAAACGGATAAATcatcagataaaaataataccaaATTAAATACTGTATTAACTAGAAGCTCAAAAACATCCAAGGAATCACCACAGATATTACCAGAATCGCCACAAATACGAAAGACTACTCCACGATTAGCAAAAACAAAAAGCGctcaaaatatgaaattaatggCCCAAGCTTTAGGTTCAAAGAACTCGTCAAACTGCAGTATCttaaaatctaaagaaaaagatactgtagataagaatattaatgaacATTCCTCCGCCTCAAAAGTGgataatgaagaagaaatagCAGAATTAATGTTAGCGAGCagtacaataataaaagatcCTGTAAGTAGGAAAAAGGCTAAACAAACTAGGGaattggaaattattaaaagattattaaaatcagaaaacCCATTGACCGAAGAAGAACGTGAAGcaaaatttgcTGCATCATATCTTCAGAAACTTCACTTGATATTGGAGTCTAATAATCCAGAGACATTTAAGGCTGCGATAAAGTTATACTTGGATTATAgtgaaaaattagaaagtatTAACCATACTGCTATTGATCAGTCCATAATTGGAGGATCCGAGGAATTTTTAGcaaataaacaaatgttaCAAGATAATgcgattaaaaaagatatactaACAATCCAACTATATCAAGAAGTCTGTAAAAAATTGCAGGACTATCCAGAAATATGCAcagattttctattatttttaaaaccgCATCAAGCTGCAATGATTGGTAAATCTATAGAATACATGATGTTgcaaaaaatgaatgattttgTCCATGTTGCACAAATATACTTTGCTAAGCAACCATCCCGAATAGCAAAGATGATGCAGGCAATAACACAACTTTCGTCTGATCCACACACGACTTTAGAAAACGTTTATGCCATTATGAGTTCTGTTTTTAAAGGTCATCCACTCGTTATGGATatgtttttgcaaattttaccTACTGCGAAACCTCCTGAAagtttacTCGCGCCTCATATGTTTGAAAACATGACATGTCCGTTAGGAccttatgataaaaatacaacttACGCTGAGAACGCATTAGAGCTATATGAGAATATAGAATTACCAACAGCAACATGTCAGGAGGATCCATATGGCGGGGAGAATTGTAAATGTGATTGTCATAACACTGACGaagcaaatttgaaaaataattctgaacaTTGTGTTTCCTGTGGCACACGGTTCCTCAATGGAAGAATTTATCTTCAAACGCCTGAAGGATTACGACCTGCAAAAATTACGTTTCCTGGAGAggagaaattagaaaatattgcgcgtatatcgttaaaaattgcTGATAAAGCCATTCCACCAATCTCATCTAAAAAACGACGAAAGTCATCAAAGAATGATTCTAGTCACGAGGATATTTGTACGCAGAAACAATGCGCTACGAAACCATATTCGCCGTTAAAGGATAACGAAGATAACGAAAAGGCAAAGTCTAAAAGAAATGTCAAATTTACTACATTCAAAGCagatcaaagaaaaattttaaaaagaataggcACTGTAGATCACGCAGTCGCAGATAAGAGAATGCGAATATCTCAGTGTAAGAATAAACGAGAAAAGAAGATGACTGAAGAAAGCGACGTTTTGTCGGAACAAAATGAGCTTGATGTTATAAAGTTAGAAAAAACAAGTGAatgtacagaaataaaaactaattgttGTGCAATGCAATTATCAATGCAGGATAATTCCTCAAGTACTGAAGTAATTACAAAAACGCAGATTTCTCCAAATATAGGCAACAATACTGGTTGTAATTCAAatAATAAGAATGAAGAAACAACGGTTATAACAATAGCACTGAAAGATAATATGCAATCGAAAtccaatttaataaacaataaaccATGGACACGTCAGGAAGATATGATTTTGTTACAAAGTATCAAAAAggaatattctgaaaattcaTTTCTACTAATCAgtggaaaattagaaaatcgtACTGTTGATcaagtGAAAGAGAGATGTCAAACTTTGCTTTCTTTACTGCAGAAAatgatgtaa
Protein Sequence
MEESANTPVQESGPDTVTGSVSFTESPKKCNLSFSINFDFNDVNSENSTDSENADLQIDISEVDNYEPSSKHRREAVEKALMLNKMEEEIERQLDAKAAKTTLTATNVKNILKHVIPYEHLMAMVQRWLQDTENDINFGPKLTRAKAKKLAAAKLNIPWPITTAQKASSEVQALIQEELAEDSSDEEYNPPEHDKQSDDDREVENTANSDIESHVTRSTNTKDIASSEQQVASHVQYDSEGIFKIPAIPHVATEEESIGQRTRSKLSLSETSLEEIEQAFIPPDITADMTEDWDCELDEDWDNFLKEFTQPLTQEPAIEDDPEADPEYNILEDEEIDLWDKEELRTDRAVEVPRKEQYDLIAELLELTPMFSTQEQEVESSRKKKVLDIYNTTPPIENDTMNCSVVHLLPVLAESELPKLVNPEQRLLLATQFQQHVQLMAQHFVMTYMHPEYHSLAKLCKQNLTSLRYLSNGPNSAFNAKNLESALKLVSIWENKFNDPKFYANFKKNVTNENAKINICHANKSRHSEHVLAELEKLFVESKALMYPQLLPWIPFRNGAKYAKSAYLKSEETLIALGIEQFLPFVTSKSKKFHTKKMQLFDVAQLISHYLLPCRDAKGILHYINKRRASKDKNPIKHYFEKGYAPRIVHYIMVENKLKAPKDQPIELLPPRWQMYLQKEQKNNNSAKSIGIPYFYNNLSLEKERFNINAIIKSYPSVPSNHPLRNPIVNMLPKILPATSNPKSSLKIDNSTKQNSKFDDSGDKKISDNNTQNTEVHKRKTAVYNKAHTNLCSLKANTSEVKPTQTDKSSDKNNTKLNTVLTRSSKTSKESPQILPESPQIRKTTPRLAKTKSAQNMKLMAQALGSKNSSNCSILKSKEKDTVDKNINEHSSASKVDNEEEIAELMLASSTIIKDPVSRKKAKQTRELEIIKRLLKSENPLTEEEREAKFAASYLQKLHLILESNNPETFKAAIKLYLDYSEKLESINHTAIDQSIIGGSEEFLANKQMLQDNAIKKDILTIQLYQEVCKKLQDYPEICTDFLLFLKPHQAAMIGKSIEYMMLQKMNDFVHVAQIYFAKQPSRIAKMMQAITQLSSDPHTTLENVYAIMSSVFKGHPLVMDMFLQILPTAKPPESLLAPHMFENMTCPLGPYDKNTTYAENALELYENIELPTATCQEDPYGGENCKCDCHNTDEANLKNNSEHCVSCGTRFLNGRIYLQTPEGLRPAKITFPGEEKLENIARISLKIADKAIPPISSKKRRKSSKNDSSHEDICTQKQCATKPYSPLKDNEDNEKAKSKRNVKFTTFKADQRKILKRIGTVDHAVADKRMRISQCKNKREKKMTEESDVLSEQNELDVIKLEKTSECTEIKTNCCAMQLSMQDNSSSTEVITKTQISPNIGNNTGCNSNNKNEETTVITIALKDNMQSKSNLINNKPWTRQEDMILLQSIKKEYSENSFLLISGKLENRTVDQVKERCQTLLSLLQKMM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00014660;
90% Identity
iTF_01422168;
80% Identity
-