Tsim025748.1
Basic Information
- Insect
- Tetramorium simillimum
- Gene Symbol
- EBF3
- Assembly
- GCA_011636635.1
- Location
- VBVQ01000251.1:28702-37839[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-45 1.9e-41 142.6 1.5 113 182 153 222 148 222 0.98
Sequence Information
- Coding Sequence
- ATGGCCACGGATACGGTAAACCGGTCGACTGCGTACGTAACTTCCGGTAAAGCCGCGACGGTTTCTCGAGACAAGAACATCTTGCGTCTTCTCAAATTGGAAATCGCGTTTACCTTAAAGCGTATCGTGCACGGACACGAATTCTTCAAGTTCGAATTTGTATCTCGAAGGAATAAGATCATGATAATTAACGTATTTACACGTGCGCTTCGCTTCCTATCGTGGATCGTTGCATTGCAAATTGCAATACCCGCGGTGATGTCGGTATTTGGTGTCCCAAAGCAAGATCAGGCACGATATAAAGAAGAAGATTGTGCATACGTATCGAAGGACAAAAACGAGCCGCTTCGTATCGCCATCGACTTTAAATACTTCTTAATATGcaactttttcttaaatatgtcCTTTCAGCAGCGGTATGCTTGGCAGAATTTGGACACGTTTCCGTATTCGTCGTATTCCTCTCGTGTCAGACAGGTGCAGGATATCTACGTCAGGCTTATAGACTCCGCGACAAAACAAGCAATCATGTATGAGGGACAAGACAAGAATCCGGAAATGTGCCGTGTTCTGCTAACGCATGAAGTCATGTGCAGCCGATGCTGCGATAAGAAGAGCTGCGGCAACAGGAACGAAACGCCCAGTGATCCTGTCATCATCGACCGGTGA
- Protein Sequence
- MATDTVNRSTAYVTSGKAATVSRDKNILRLLKLEIAFTLKRIVHGHEFFKFEFVSRRNKIMIINVFTRALRFLSWIVALQIAIPAVMSVFGVPKQDQARYKEEDCAYVSKDKNEPLRIAIDFKYFLICNFFLNMSFQQRYAWQNLDTFPYSSYSSRVRQVQDIYVRLIDSATKQAIMYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -